Patella vulgata (common limpet): 126807943
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Entry
126807943 CDS
T09576
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K16630
collagen type XXII alpha
Organism
pvul
Patella vulgata (common limpet)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Endostatin
Collagen_trimer
Laminin_G_3
Laminin_G_2
DUF1554
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
126807943
NCBI-ProteinID:
XP_050388829
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All DBs
Position
9:7132792..7244149
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AA seq
1423 aa
AA seq
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MMLHRVVVPALLLGLFTVSHCQRDNSFSDSDDSRSIDLLQAIGIPSESSVDIKYATGTQG
YPSFELTRGAFIRKSAEIYFREPLFRDFAIGMSVKLAGREGGFLFAVVNPYQTIISFGVS
ITAVESDSQRQNVALYYTPNSRYQEVPIVAANFTIDSIAGRWAKLALRVEGDRITLYVNC
KEYQSVDYRRPVQQLEVEPGSSLYIGQAGDNFRATPNFEGAIEELKIYGNPNEAEGDDCN
FDFSGSGSGPDIEIEPTLFPQFTTGVPVNPTPFDRNSFKGDKGDKGDIGPPGSYRPPLIT
PPPPDLAGLIGPKGDKGDIGEAGNPGFPGQKGQKGEMGELGVAGVAGARGERGEKGEIGL
TGPSGKPGIAIQGPPGPVGPPGLPGSIDIIPELERGEKGERGLPGLPGVPGDRGTNGLPG
EKGSKGDSIIGPGGPRGLVGPPGPPGPPGLAIVDVDGTGSGDIDALPGEPGLPGPVGPMG
PIGPVGPVGPQGLKGSRGLPGEPGQPGKPGSGFEMNMTEMIGADGRDGLPGPVGATGLPG
VPGATGSPGPVGPQGIRGEPGLPGPQGELGEPGPKGDRGNDGRDGRDGARGIQGIAGPPG
PPGPAGRGDGGGGFFNSGDGGDGSADGDFGIVGPVGPAGPEGPAGVPGLDGLPGERGERG
PAGERGMKGERGFEGETGPVGPRGEAGLPGTPGPQGPTGEPGLPGPRGFQGERGLPGVGE
RGLTGNPGPRGLPGPPGALVTVGGSGSSGDEVGPVVAAPGPKGEPGEPGMDGLPGIDGIP
GVDGVSGIPGAPGEPGLIGLQGMKGDTGDFGPVGPVGPPGPPGQVVYTGGDSGRPYPPQL
AVKGEKGDKGDEGLRGPIGPRGFPGRMGEMGMPGFPGRPGIRGRKGEPGIGFNGQKGVKG
DAGPPGLFPGGGGVFIPGPKGDTGNSGTPGTPGRPGPPGPPGPAGLSRVDDSGQSIVLAE
KGMKGEPGFPGRDGRDGEPGREGRLGPVGPEGSQGQRGLPGPPGPAGLPSFGNNFIEGST
DAQFVRGPPGPPGPVGPPGERGLRGLPGLGIEGPRGRQGPVGPAGPPGPPGIGIPGARGP
PGPPGNGGDVVIGSERDDRRRAQYYQGPPGPPGPTGKCGCDGDSSNRGHVEGDPSAINNG
GPVVFRNMDSLLEVSHNMPVGTMAYVMDQEFVYLRVERGWRYIQLGQMIPLPSPTTPDPR
YRNRPNGHRRPSRRPNDQGRTESPFQPLTTTSSPRVPILPPPSITAGPKLHLLALNHPMP
GDMHGIRGADYECHRQARRAGLRGTYRAFLSTKTQNLDSIIYYSLDRKIPVVNAKDEIIF
NSWEDLVNGAGGYFNNNSTIYSFDGKDIMHDSAWPQKIIWHGSDSHGQLMSDDYCRRWQS
NSRNRMGLGSSLMKNMLLDSQKYACNNAFIVLCVENTSRRNLR
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttcacagggtcgtcgtgccggcccttctattgggcttgtttacagttagccac
tgtcaacgggataacagtttctcagattcggatgattctcggagtattgatctattacaa
gcaataggaatacccagtgagagttccgtcgatataaaatatgccacaggcactcaaggt
tacccttccttcgaactcacacgaggagcctttatacgaaaatcggcagaaatttatttt
agggagccattatttagagactttgctattggaatgtcagtgaaattagctggtagagaa
ggaggatttttatttgcggtggtgaatccgtatcaaactattatatccttcggtgtcagc
attaccgctgttgaatcggatagtcagagacaaaatgtggcgttgtattacactcctaat
tctagatatcaggaagtgccgattgttgctgctaacttcacgatagattctattgctggt
cgatgggcgaagttagcattacgtgttgaaggtgacaggattacgttatatgtgaattgt
aaggaatatcaatccgtagactatcgacgtccagttcaacagttagaagtggagcccgga
tcatcgctgtatataggtcaagcaggagataatttcagagcaacacctaattttgaggga
gcaatagaagaattaaaaatttatggaaatccaaatgaagcggagggagatgattgtaat
tttgattttagtggatcaggatctggaccagatatagaaatagaaccaacattatttcca
cagtttactactggtgttccagttaatcctacaccttttgatagaaacagttttaagggc
gacaagggagataaaggtgatattggaccccctggttcctatcgacctccacttattaca
cctccaccaccagatctagcaggacttattggacctaaaggtgataaaggagatattggt
gaagctggaaatccaggattcccaggacagaaaggacaaaagggtgaaatgggtgaatta
ggtgtggcaggtgttgctggtgctcgtggtgaacgaggagagaaaggagaaatcgggtta
accggaccatcgggtaagccaggtattgctattcagggtccacctggtcctgttggtcct
ccagggttaccagggtctatagatattataccagaattagaacgaggagagaagggagaa
aggggccttccaggtttaccaggtgttccaggtgatagaggtacaaatggcttaccaggt
gaaaaaggatcaaagggtgacagtataattggtcctggaggtcctcgaggtttagttggt
ccaccagggccaccaggtccacctggattagctattgttgatgtggatggaactggttct
ggtgatattgatgctttaccaggtgaaccagggctaccaggtcctgtgggtcccatgggt
ccaattggccctgttggccctgtgggtccacaaggtttgaagggatcacgtggtctaccc
ggtgaaccaggtcagcctggcaagccaggaagtgggtttgaaatgaatatgacagaaatg
attggagcagatggtagagatggtttaccaggaccagttggtgctacaggtctacctgga
gtacctggagctactggatcacctggtcctgttggtccacaaggtatacgcggagagcct
ggattaccaggacctcaaggagaactgggtgaacctggacctaaaggtgatcgaggtaat
gatggtcgagatggccgcgatggagctagaggtattcagggtattgctggaccacctggt
cctcctggtccagcaggtagaggagatggaggaggaggtttctttaacagcggtgatggt
ggagatggatctgctgatggtgactttggaattgttggcccagttggacctgctggtcct
gaaggtccagctggtgttcctggcttagatggtttacctggagaacgtggtgagcgtgga
ccggctggggaacgtggtatgaaaggcgaacgtggatttgaaggtgaaactggacctgtt
gggcctagaggtgaagctggtcttcctggaacccctggacctcaaggtccaactggtgaa
cctggccttccaggacctagaggatttcagggagagcgtggtttaccaggcgtaggagaa
cgtggcttgacaggtaatccaggaccccgcgggcttcctggacctcctggtgctcttgtt
acagttggtggatctggtagctctggtgatgaagttggacctgttgttgctgctcctgga
ccaaagggcgaaccaggtgaaccaggaatggatggtctaccaggtattgatggtatccct
ggtgttgatggtgtatctggtataccaggtgctccaggtgaacctggtttaataggatta
cagggtatgaagggtgatactggtgattttggacctgttggaccagttggtcctcctggt
cctccaggtcaagttgtttacactggtggtgatagtggtagaccctatccaccacaattg
gcagtcaagggtgagaagggtgataagggtgatgaagggttaagagggccaattggacca
cgtggtttccctggtagaatgggagaaatgggaatgccaggattcccgggccgaccaggt
atacgaggtcgtaaaggtgagccagggataggtttcaatggacagaaaggtgttaagggt
gatgctggaccacctggactattccctggaggaggaggagtttttatacctggacctaaa
ggtgacactggaaatagtggaactcctggtactcctggacgacctggccctcctggtcct
ccaggtcctgctggattgtcaagagtagatgactcaggacagagtattgttctagctgaa
aaaggtatgaagggtgaacctggtttcccaggtagagatggaagggatggagaacctggt
agagaaggtcgattgggacctgttggacctgaaggtagccagggacaacgtggtctgcct
ggaccacctggaccagctggccttccaagtttcggtaataattttatagaaggaagtaca
gatgctcagtttgtccgaggtcctcctggtccacctggtccagttggtccacctggtgaa
aggggattgagaggtcttcctggtctaggtatagaggggccaagaggaagacagggaccc
gttggtcctgctggtcctcccgggccacctggaattggtattcctggtgcacgaggccca
cctggtcctcctggtaatggtggagacgttgtcattggaagtgaacgtgacgacagacga
cgggctcagtattatcaaggtcctcctggtcccccaggaccaactggtaaatgtggatgt
gatggggatagcagtaacagaggacatgttgaaggagatccatcagctattaataatggt
ggtcctgttgtattccgtaatatggatagtctattagaagtatctcataatatgcctgtt
ggaacaatggcctacgtcatggatcaggagtttgtctatttaagagtagagagaggatgg
aggtacattcagttaggccagatgattccattaccaagtcccacaacaccagacccacgg
tatcgcaatcgccccaacgggcatcggcgcccttcacgacgacctaatgatcaaggtcgt
acagaatctccatttcaaccattgacaactacaagctctccaagagttcccatactacca
cccccgagcatcacagctgggccaaagttacatttacttgctttgaaccatccaatgcct
ggtgacatgcatggtatcagaggagcagattatgaatgccatcgacaagctagaagggct
ggattacgcggtacctacagggctttcttatcaactaaaacacaaaatctagattccatt
atctattatagtcttgatagaaagatcccagttgtgaatgcaaaggatgagatcatattt
aattcctgggaagacttagtaaatggagcaggaggttattttaataacaattcaacgata
tattcatttgatggaaaagatattatgcatgactccgcttggccacagaagattatatgg
catggatcggacagtcatggtcaattgatgtctgacgattactgtcgtagatggcaatct
aatagtagaaacagaatgggattaggtagctcactgatgaaaaatatgttattagacagt
caaaaatatgcttgtaataatgcttttattgttctctgtgttgaaaatactagccgtaga
aatctacgataa
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