Patella vulgata (common limpet): 126808398
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Entry
126808398 CDS
T09576
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126808398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvul03041
]
126808398
Spliceosome [BR:
pvul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126808398
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
PRP4
Beta-prop_EIPR1
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
Ge1_WD40
WD_LRWD1
Beta-prop_SPT8
WD40_like
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR11_1st
DUF6825
Motif
Other DBs
NCBI-GeneID:
126808398
NCBI-ProteinID:
XP_050389042
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Position
1:8451522..8471609
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AA seq
519 aa
AA seq
DB search
MSDMSDDEDDRIKIVKKDKVIQYGSLEEKEKERLANAETSGSLANDALEAGKASGNINIS
SEQSHFDIDDDAGQAEALAVFEKRKRARQIQVSTDDFEVKATLRELGDPICLFGEGPAER
RERLRQLLAQIGAYALKKKEEEKAAEAKKKEEENVTWYHEGSESLKEARLWIGNYSIPRA
KERVGKQKEEKNIPTTQLNAKLQELHKRIRSVTNDCSQIGDSRPLSFCEFSPDSKLLAVA
SWSGLCKLWSIPDCEMVRELRGHSCNVGAIVFHPQATLSLDDNACCMASCGQDGTVKLWN
LVSDEPIADIEGHAPFRVSRLAYHPSGRFLGTCCFDNSWRLWDLEAQDEVLHQEGHSKPV
YDISFQIDGALAATCGLDAYCRVWDLRSGRCIMFLEGHLKSILSVDFSPDGYHLATGSED
NMAKVWDLRQRKCVYTIPAHTNLISCVKFQPDHGNYLVTASYDGTAKIWAQPTWTPLRTL
AGHEGKIMGLDISPDLKHMATCSFDRTFKIWVSETAGSL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacatgtcagatgatgaggatgatagaataaagatagtgaaaaaagataaggtt
atccagtatggtagtcttgaagaaaaggagaaggaaagattagctaatgccgagactagc
ggatctttagctaatgacgctcttgaagccggaaaagcatccggcaatatcaatatatct
tcagaacagagtcattttgatatagatgatgatgcaggtcaagctgaagccttagctgtg
tttgaaaagagaaagagggccagacagatccaggtatccacagatgattttgaagttaaa
gccacattacgagagctaggcgatccaatctgtttgtttggtgaaggaccagcagaaaga
agggagagattacgtcaattattagcacaaattggagcatatgccttgaagaaaaaagag
gaggaaaaagctgctgaagccaagaagaaagaagaggaaaatgtaacatggtatcatgaa
ggttctgaaagtttaaaagaagccagattatggataggaaattattctatacccagagct
aaagaaagagttggtaaacaaaaagaagagaaaaatattccaactactcaactcaatgcg
aaattacaagaattacataaacgaattcgatctgttaccaatgattgtagtcagatagga
gacagtagaccattgtctttctgtgaattcagtccagattctaaacttttagcagtggcc
tcttggtctggtttatgtaaattatggtcaataccagattgtgaaatggtgagagaattg
agaggtcatagttgtaatgtaggagctattgtatttcatccacaagctacactatcatta
gatgataatgcctgttgtatggcatcgtgtggacaagatggcacagttaaactatggaat
ctagttagtgatgagcctatagctgatatagaaggacacgcaccattccgtgtatccaga
ttagcctaccatccatcaggtcgttttctaggaacatgttgttttgataattcctggaga
ttatgggatcttgaagcacaagatgaagttctacatcaagaaggccacagtaaaccagtt
tatgatatatcattccagattgatggtgctctcgcagccacatgtggattagatgcatat
tgtcgtgtatgggatttacgatctggtagatgtatcatgtttttagaaggtcatttaaag
tctattttatctgttgactttagtcctgatgggtatcatctagcgaccggcagtgaagat
aatatggctaaagtttgggatctacgacagagaaaatgtgtttatactattccagctcat
actaatcttatttcctgtgttaaatttcaacctgatcatggaaattatttagtaacagct
tcctacgacggtacagcaaagatttgggcacaaccaacttggacaccattaagaacatta
gcaggacacgaaggcaagataatgggactagatatatcaccagatttaaaacacatggct
acttgctcctttgatagaacttttaaaatctgggtatcagagactgcaggctctttatag
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