Patella vulgata (common limpet): 126808633
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Entry
126808633 CDS
T09576
Name
(RefSeq) polyadenylate-binding protein 1A isoform X6
KO
K13126
polyadenylate-binding protein
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03015
mRNA surveillance pathway
pvul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126808633
09123 Folding, sorting and degradation
03018 RNA degradation
126808633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126808633
03041 Spliceosome [BR:
pvul03041
]
126808633
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126808633
mRNA cycle factors
Stress granule specific factors
126808633
Spliceosome [BR:
pvul03041
]
Complex C
Other components
Complex C specific factors
126808633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
126808633
NCBI-ProteinID:
XP_050389483
LinkDB
All DBs
Position
1:complement(80973493..80999500)
Genome browser
AA seq
724 aa
AA seq
DB search
MNVNNFKSGVGNVFIKNLDKSIDNKALYRTFSAFGNIIFCKIAADEQGSKGYGFVHFKTE
EAAKQAIEKVNGMLLNGKKVNVGMMGEEYDDDKLKVEMEKFGKVISAKVMTDNQNLSRGF
GFVSFEDPETAEKCVDNIMGTELNGKTLYAGRAQKRAERQAELKEKFERLKMERINRYQG
VNLYVKNLDDCIDDERLRKEFSQFGTVTSAKVMGDGTRSKGFGFGFVCFSSPEEATKAVT
EMNGRIIVAKPLYVTLAQRKEDRRAHLASQYMQRITTMRQQQNAQYSQMFKPSGAGYFVP
QLPQATRGFFTPTQMPQVQASPRWQAQVREPVPGGASFQAVQSNQLRTELNGKTLYAGRA
QKRAESQAELEEKFERLKMKRINRYQGVNLYVKNLDDCIDDERLRKEFSQFGTITSAKVM
GDGTSLKGVGFVCFSSPEEATKAVTEMNGRIIVAKPLYVALAQRKEDRRAHLASQYMQRI
TTTRQQQNAQYSQMFQPSGAGYFVPQLPQATRGFFTPTQMPQVQASPRWQAQVRQPAPGG
ASFQAVQSNQLRPARFQGSGQQGVRANMNARPITGQAGGQPGGQRMMGPGMPRGPPGAAG
MAAPQRGAFKFNNQIRNPQMGQQVMSQPAASVVIAGQEPLTANMLAAAPPQDQKQMLGER
LFPLINRMHPDLAGKITGMLLEIDNSELLHMLESQESLKGKVEEAVAGLVAHQAKESATK
KGPE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttaacaacttcaaatctggtgttggaaacgttttcattaagaatctggataag
agtatcgataacaaagctctgtaccgtacattttctgcttttggaaacatcattttttgt
aagattgccgctgacgaacaaggctccaaaggttatggttttgttcattttaaaaccgaa
gaagcagctaaacaggctattgagaaagtcaatggtatgttgttaaacggtaagaaagta
aatgtaggaatgatgggtgaggaatatgatgatgacaaactgaaagtagagatggaaaaa
tttggaaaggtcatcagtgcaaaggtgatgacagataaccagaatctatcaagaggcttc
ggttttgtcagttttgaagatccagaaactgctgaaaagtgtgtagacaatattatggga
acagagctcaatggcaaaacattgtatgctggtcgagctcaaaaacgtgctgaaaggcag
gctgagctcaaggagaaatttgagcgattgaagatggagcgaattaatcgttatcaagga
gtgaacttgtatgttaaaaatctggatgactgtatcgatgacgaacgactgagaaaagaa
ttctcacaattcggtaccgtcactagtgccaaggtgatgggagatggaaccagatcaaaa
ggatttggatttggatttgtctgcttcagttcaccagaagaagcaactaaagctgtcact
gaaatgaacggtagaattattgttgccaaacctctgtatgtcacacttgctcaacgcaaa
gaggatcgaagagctcatctagcttcccaatacatgcaacgtattactaccatgagacaa
cagcaaaatgctcagtacagtcagatgttcaaaccaagtggagccggttattttgttccc
caactgcctcaggctactcgtggattcttcacaccaactcagatgccacaagttcaagct
agtccaagatggcaggctcaagtcagagaacctgtaccaggaggagcaagcttccaagct
gttcaaagcaatcaacttcgaacagagctcaatggcaaaacattgtatgctggtcgagct
caaaaacgtgctgaaagtcaggctgagctcgaggagaaatttgagcgattgaagatgaag
cgaattaatcgttatcaaggagtgaacttgtatgttaaaaatctggatgactgtatcgat
gacgaacgactgagaaaagaattctcacaattcggtaccatcactagtgccaaggtgatg
ggagatggaaccagtttaaaaggagttggatttgtctgcttcagttcaccagaagaagca
actaaagctgtcactgaaatgaacggtagaattattgttgccaaacctctgtatgtcgca
cttgctcaacgcaaagaggatcgaagagctcatctagcttcccaatacatgcaacgtatt
actaccacgagacaacagcaaaatgctcagtacagtcagatgttccaaccaagtggagcc
ggttattttgttccccaactgcctcaggctactcgtggattcttcacaccaactcagatg
ccacaagttcaagctagtccaagatggcaggctcaagtcagacaacctgcaccaggagga
gcaagcttccaagctgttcaaagcaatcaacttcgaccagctcgcttccagggtagtgga
caacagggtgtaagagctaacatgaacgctcgacctataactggacaagctggtggtcag
ccaggtggacagagaatgatgggtccaggtatgccacgaggacccccaggggctgccggt
atggctgcaccccagagaggtgccttcaaattcaacaatcaaatcagaaatcctcaaatg
ggtcaacaggtcatgtcacagcctgctgcttcagtggtaattgctggtcaggaaccattg
accgccaacatgttggctgctgctccaccacaagaccagaaacagatgttgggagaaaga
ttattccctctgatcaatcgtatgcacccagatctagctggtaaaatcactggaatgttg
ctggaaattgacaactcagaattgttgcacatgttggaatcccaggaatctctcaagggc
aaggttgaagaagctgtggctggactcgtggctcatcaagccaaagagagtgctacaaag
aaaggccctgagtaa
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