Patella vulgata (common limpet): 126808706
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Entry
126808706 CDS
T09576
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul00100
Steroid biosynthesis
pvul01100
Metabolic pathways
Module
pvul_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
126808706
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvul01006
]
126808706
Enzymes [BR:
pvul01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
126808706
Prenyltransferases [BR:
pvul01006
]
Terpene biosynthesis
Squalene/phytoene synthase
126808706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
NAD_binding_9
Motif
Other DBs
NCBI-GeneID:
126808706
NCBI-ProteinID:
XP_050389629
LinkDB
All DBs
Position
1:complement(89616587..89627217)
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AA seq
418 aa
AA seq
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MEFVKSFAHPDEVMALVKFKMGGCQAVMPKCDTKTMSETLKKCYVHLTNTSRSFAAVIQA
IDDVALRHATCIFYLVLRALDTVEDDMTIPNSIKIPMLKSFYKNLQDKNWKYMDSKEKDK
LVLEDFPTISYEFRQLEPVYQQVISDICKQMGAGMTVFFERDLITLAEWDEYCHYVAGLV
GIGLSKLFSASKQEDDIVGKDTYLSNRMGLFLQKTNIIRDYLEDQLEGRAFWPRAVWGKY
ASELGDLAKEENVDKSVQCLNELITNALELIPDCIKYMSRLKDQSVFNFCAIPQVMAIGT
LERCYNNSKVFKGVVKIRKGEAVKMMMGSTNLEQVKAIMSHFTSEILRRIPANDPTANRT
REVCQQALNVCQTKHEYTTSSIFPPLYMSCVLMIGAISYKYWSEISSVYDSFVDSYTT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtgaaatcttttgcacaccccgatgaagttatggctctagtaaagtttaag
atgggaggttgtcaagcagtgatgcctaaatgtgatacgaagactatgagtgaaacatta
aagaaatgttatgtacatctaaccaatacgagtagaagtttcgcagctgtaatacaggcc
attgatgatgtcgcactcagacatgctacgtgtatattttatctggtattaagggcgtta
gatactgtagaagatgatatgaccattcctaactctataaaaatacccatgttaaaatca
ttctataaaaatctacaagataaaaactggaaatatatggacagtaaagaaaaagataaa
ctcgtgttagaagatttccctacaatatcgtacgagtttcgtcagttagaacctgtttat
caacaagttatatcagatatatgtaaacagatgggtgctggtatgactgtattttttgaa
cgagatttaataactttagctgagtgggatgagtattgtcattatgtagctggtttagtt
ggtataggattatcaaagttattctcagcatcaaaacaagaagatgatatagttggtaaa
gatacgtatctgtctaatagaatgggattatttctacagaagaccaatataatacgagat
tatctggaagatcaactagagggtcgagctttctggcctcgcgctgtatggggtaaatat
gccagtgaactgggtgatctagctaaagaagaaaatgtagacaagtccgtccagtgttta
aatgagctgataaccaatgctctagagttaatacctgactgtattaaatatatgtcacgg
ttaaaagatcaaagtgtttttaacttctgtgctataccacaggttatggctataggtacg
ttagaaaggtgttataataacagtaaagtatttaaaggtgttgtgaagatcaggaaaggt
gaagcagttaaaatgatgatgggatccacaaatttagaacaagttaaagcaatcatgagt
catttcacatcagagattttacgaagaattccagccaatgatccgacagccaatcgaacg
agagaagtttgtcagcaagcactgaacgtctgtcaaactaaacacgaatacacaacatcc
agtatctttcctcctctatatatgtcgtgtgtcttgatgattggagctatatcatataaa
tattggtcggagatatcgtccgtttacgattcatttgttgatagttatactacgtga
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