Entry |
|
Name |
(RefSeq) DNA polymerase beta isoform X1
|
KO |
|
Organism |
pvul Patella vulgata (common limpet)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pvul00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
126809762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:pvul03400]
126809762
Enzymes [BR:pvul01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
126809762
DNA repair and recombination proteins [BR:pvul03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
126809762
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
126809762
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:9057435..9076933
|
AA seq |
336 aa
MSKRKAPTTDNPNADFCDFLMELANYEKNVNRQMHKYNVYRKAAGLLNKHPTRIKSGDEA
KKLDGIGKQIGKKIDEFIATGSLAKLDKIRASDTNVAITELTKVTGIGPAAAQKFVQDGI
MSIEDLRKNVDKLNHHQQIGVKYFEDFEKRIPREEMEKLKEIVFGVIKKLDDEYTADVCG
SFRRGATSSGDIDILLTHPSFNSTDKKQPELLKNVVLKLEKIDFITDRLSLGDSKFMGVC
ALPESDEETKRVFRRIDIRLIPHDQFYPALLYFTGSDIFNKNMRAHALEQGFTLNEYSIR
PVGSTGTPGEPLPVSSEEDIFDYIDYKFKKPSERNE |
NT seq |
1011 nt +upstreamnt +downstreamnt
atgagcaagagaaaggccccgactacagacaatcccaatgctgatttttgtgattttttg
atggaattggccaactatgagaagaatgtgaatcgtcagatgcataaatacaatgtttat
cgtaaagcagccggtttactcaataaacatccaacacggattaaatctggtgatgaagcc
aagaaactagacggtattggtaaacaaattgggaagaaaattgatgaatttattgcaacc
ggaagtttagcaaaattagacaagattcgagcgagtgataccaatgtagcgataacagaa
ctcaccaaagtaacaggcattggacctgctgcagctcagaaatttgttcaagatggaatc
atgagtatagaagatttacgtaaaaacgttgataaactgaaccatcatcaacagattggt
gtaaaatattttgaagattttgagaaaagaattccgagagaggaaatggagaaattaaag
gaaatagtatttggtgttataaagaaattagatgatgaatacacagcggatgtttgcggt
agttttagaagaggtgctacctctagtggtgatatagatattttgttgactcatcctagt
tttaactcaacagataaaaaacagcctgaattattaaagaatgttgtcttaaaactagaa
aaaattgattttataacagatcgtctttcactgggtgattccaaattcatgggagtttgt
gctttacctgaatctgatgaagaaacaaaacgtgtgtttagaagaattgatattcgttta
attccacacgatcagttttatcctgctctcctgtattttactggttccgatatatttaat
aaaaatatgcgtgctcacgctctggaacaaggctttacactcaatgaatacagtatacga
cctgttggtagtacaggtacaccaggtgaaccattacctgtatcaagtgaagaagatata
ttcgactatatagactacaagttcaagaaacccagtgaacgcaatgaataa |