Patella vulgata (common limpet): 126810835
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Entry
126810835 CDS
T09576
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126810835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvul03041
]
126810835
Spliceosome [BR:
pvul03041
]
Complex C
Other components
Step II factors
126810835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_DCAF4
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
PEP5_VPS11_N
PH_4
HflK_N
Motif
Other DBs
NCBI-GeneID:
126810835
NCBI-ProteinID:
XP_050392096
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All DBs
Position
2:complement(16018215..16036072)
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AA seq
577 aa
AA seq
DB search
MAAMLALKTYDSDSNESTDSENKEETTNDDSFSHLKPIDTDSSISKAIALNAAPVVASKD
DVHLTRTFEAGTKEVTFNPKYEELYAPQVGPENPFKTNQAQSVRNTLTGYVEPAHINNFH
FDNQRKTFTSYGYALDPSVDIHQVEEKVIGDTTAAEDNKGLTVFEQKPKEKESEKRKRQK
NPDASDIEGYLGPWGKYVDEETISKPNEEEQKDLDEILAKRSKMGKQKEEKITEEKTTLH
IKDAYDYQGRSFLHAPQDVGVNLKSDDPPEKCFLPKKHIHTWTGHTKGVSAIRWFPKTAH
LLLSCSMDTKIKIWEVYNERRCVRTYNGHKQATRDISFNNDGTEFLSCAYDRYCKLWDTE
TGECKGRFTSRKVPYCIKFHPDEDKQHLFVAGTSDKKIVCWDIRSNEIVQEYDRHLGAVN
TITFVDQNRRFVSTSDDKSLRVWEWDIPVDFKYISDPSMHSMPATNLSPNGKWLACQSMD
NKICVFNVLNRFKYMRKKLFTGHMVAGFACSMDFSPDMSYLISGDADGKLYIWDWKSTKL
YSKFKAHDDVCISCLWHPHETSKVATCGWDGVIKYWD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgatgttggctttaaaaacgtacgacagtgattcaaatgaatctactgactcg
gaaaataaagaagaaaccactaatgatgactccttttcacatttgaagcccattgacaca
gacagttctatttccaaagccatagcacttaatgcggctccggttgttgcgtctaaagat
gatgtacatctcacaagaacttttgaagctggaacaaaagaagttactttcaatccaaaa
tatgaagaactatatgcaccccaggttggtcctgaaaatcccttcaaaactaatcaagcc
cagtctgttagaaatactttaacaggttatgttgaaccagcacatataaataatttccat
tttgacaaccagagaaaaacatttacaagttatgggtatgctctagatcctagtgttgat
attcatcaagtagaagaaaaagttattggagatacaactgcagctgaagataacaaggga
ttgacagtatttgaacaaaaacctaaagaaaaggaatctgagaaacgaaaaagacagaaa
aatcctgatgcatctgatattgagggatatctgggaccatggggtaaatatgtggatgaa
gaaactatttcaaaacctaatgaggaagaacagaaagacttagatgaaattttagccaaa
agaagtaaaatgggtaaacaaaaggaagaaaaaatcacagaagaaaagacaactttacac
atcaaagatgcttacgattaccaggggcgttcatttttacatgcacctcaagatgttggt
gtcaatttgaaatctgacgatccaccagaaaaatgttttctccccaaaaaacatattcac
acatggactggtcacacgaaaggtgtatctgctattcgatggtttcctaaaacggctcat
ttactgttatcatgtagtatggatactaaaataaagatttgggaagtgtataatgaaaga
cgttgtgttcgaacatataatggtcataaacaagcaacaagagatattagttttaataat
gatggtacagaatttcttagttgtgcatatgacagatattgtaaactatgggacactgaa
acaggtgaatgtaaggggagatttacaagtagaaaagtaccatattgtattaaatttcat
cctgatgaagataaacaacacttgtttgttgcaggaacgtcagataaaaaaatagtttgt
tgggatattagaagtaatgaaattgttcaggaatatgatcgacatttaggagctgtaaat
acaatcacattcgtagatcaaaaccgacgatttgtatctacatctgatgataaaagttta
cgagtatgggaatgggatataccagtagattttaaatatatatcagatccatctatgcat
tctatgccagctacaaatttatcacccaatggaaaatggttggcctgtcagtctatggat
aataaaatttgtgtatttaatgtgttaaatagatttaaatatatgagaaaaaaattattc
actggtcatatggttgctggttttgcctgttctatggatttctcaccagatatgagctat
ttgatatcgggtgatgcagatggcaagttgtatatctgggattggaagagtaccaaatta
tacagtaaattcaaagctcatgatgatgtgtgtatctcttgtttgtggcacccccatgaa
acctctaaagtagcaacatgtggctgggatggtgttattaaatattgggactag
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