Patella vulgata (common limpet): 126810892
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Entry
126810892 CDS
T09576
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126810892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvul03400
]
126810892
DNA repair and recombination proteins [BR:
pvul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126810892
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
126810892
NCBI-ProteinID:
XP_050392192
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All DBs
Position
2:complement(22334610..22358703)
Genome browser
AA seq
933 aa
AA seq
DB search
MAVQPKQELQLDFSQEQGFLAFHKGLPEKPNTTLRVFDRSDYYTVHGQDALFVAKEVFKT
TGVVKYLGGGSKKLESVVLSKMNFESLMRDLLLVQQYRVEVYRNKGSSKNNDWTLALKAS
PGNLSQFEEILFGNNEMAGSVGVVAIKIATENGQKMVGVGYADATVRKFCVCEFHDNDQY
SNLEALLVQLGPKECVLGTSELTADTKLKQVLDRSNALVTERKKTEFNNKDIVQDMNRLL
KKKKGEQANSAALSEMDKVHAVAALAAVIKYLEVLSDESNFGQYTLLTFDLKQYMRLDSA
AVRALNLLPNPNESGNKNQSVLGLLNKCRTAQGQRLIAQWVKQPLMDINKIEERLNVVET
MLENTELRQTLQEEQLRKIPDFQRLAKKFQRKKANLQDCYRVYQAIDKMPYLLETLEKHE
GTHHALLMELFSNPLKELLMDFAKFQEMVETTMDLDQVENHEFVIKSDFDENLAELRERI
DSLESDIKAQVNKVARDLGLEANKTLKLESNNQLGYYFRVTRKDEKALRNNKNYRTIDTN
KNGVRFRNSAVQKHNEEYLKAKEEYNEQQKSVVAEIVEIAAGYVEPMLIINDVVAQLDVL
VSFAHVSASAPIQYVRPKMLSPGSGSLKLNEARHPCLEMQDDVSFIPNDAVFKKDEQMFH
IITGPNMGGKSTYIRSVGVIVLMAQLGCFVPCSEAEVTIVDSILARVGAGDSQLKGVSTF
MAEMLETASILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEHIATKIKAFCLFATHFH
ELTALSDSVTTVNNLHVTALTTNNTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVIEFAK
EKANELEDFQSVSLEGTDFEGDGEPAIKKRKLAKQEGEELIHDFLQRVKKLPINSMTEED
LKKEVDKLKEEISAKNNPYIKDILAKTKKQQCS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcaaccaaaacaagaattacaacttgatttttcacaggaacaaggatttcta
gcttttcataaaggattgccagagaaaccaaatacaacattacgtgtgtttgacagatca
gattattatactgttcatggtcaagatgctttattcgttgcgaaggaagtttttaaaaca
accggtgttgtcaaatacttaggaggaggaagtaaaaaactagaatctgtggtactcagt
aagatgaattttgaatctttaatgcgagacctgttattggttcaacagtatagagtagaa
gtatatcgtaataaaggatcttctaaaaataatgactggactttagctttaaaggcttca
ccaggtaatctaagccagtttgaagagatattatttggaaataatgaaatggctggatca
gtaggtgtggtcgctattaagatagctacagaaaatggacagaagatggttggtgttgga
tatgcagatgccactgtgagaaaattttgtgtctgtgaatttcatgataatgaccagtac
tctaacttagaggctttgttagttcaacttggaccaaaagaatgtgttttaggaaccagt
gaattgactgccgatacgaaactgaagcaagttttagatcgaagtaacgcactcgtaact
gagagaaagaaaaccgagtttaataataaagatatagtacaagatatgaatagattattg
aaaaagaaaaagggagaacaagctaatagtgctgctttatctgaaatggataaagtgcat
gctgttgcagctttagctgcagttatcaaatacttagaggttttgtcggatgaaagtaac
ttcggtcaatatactttgttaacctttgacctcaaacagtatatgagattagattcagct
gctgttagagctttaaatctgcttcctaatccaaatgaaagtggtaataaaaatcaaagt
gtgctagggttactcaataaatgtcgtacagctcagggtcaaaggttaatagcacaatgg
gtaaaacaaccattaatggatataaacaagatagaggaaagattaaatgttgtagaaact
atgttagaaaatacagaactacggcaaacacttcaggaagaacaactgcgtaaaatacca
gattttcaaagactagcgaaaaaattccagagaaaaaaggccaatttacaggactgttat
agagtatatcaagctatagataagatgccctatctactagaaacattagaaaaacatgaa
ggaactcatcatgcattactcatggaattgttttcaaatccattaaaggaattgttgatg
gattttgccaagtttcaagaaatggttgaaacaacaatggacttagatcaagtagaaaac
catgaatttgttattaagtcagattttgatgaaaaccttgcagaactaagagaaagaatt
gattcattggaaagtgatatcaaggctcaagtaaacaaggttgcacgtgatttgggatta
gaagcaaataaaactttaaaactagaaagtaataatcagctaggttattattttagagtt
acaagaaaagatgaaaaggcactgagaaacaataaaaattatagaactattgacacaaat
aaaaacggtgttcgttttcgtaattcagctgttcaaaaacacaacgaagaatatctaaaa
gccaaagaagaatataacgaacaacagaaaagtgttgtagctgaaatagtagaaatagca
gctggctatgttgaacctatgttaataataaatgatgtggtagcacagttagatgtatta
gttagctttgctcatgtctctgccagtgctccaattcagtatgtcagacccaagatgctc
agtccaggtagtggaagtttgaaacttaatgaagcaagacatccatgtcttgaaatgcag
gatgatgtctcatttattccaaatgatgctgtctttaagaaagatgaacaaatgtttcat
attattactggaccaaatatgggtggaaaatcaacatatattagatcagttggagttatt
gtattaatggcacaacttggttgttttgtgccatgttcagaagcagaagtaacaatagtt
gatagtatattagctcgggttggagcaggtgatagtcaacttaaaggtgtatccacattc
atggcagaaatgctagaaacagcttctatactaaggtcagctacagaagattcactaatt
ataatagatgaattagggagaggaacatccacatatgatggatttggtttagcttgggct
atttcagaacatattgctacaaagatcaaggcattttgcttatttgccacccattttcat
gaattgacagctttatctgacagtgtcactactgttaataatcttcatgtgacggcactg
acaacaaacaatacattaacgttgctatatcgagtaaaaccaggtgtttgtgatcagagt
tttggtattcacgtagcagaactggctcactttcctaaacatgttatagagtttgctaaa
gagaaggctaatgaattagaagattttcaatcagtcagtttagaaggaacagattttgaa
ggtgatggtgaacctgctattaagaaaagaaaattggcaaaacaggagggtgaagaatta
atccatgattttctacaaagagtgaaaaaattacctatcaattctatgacagaagaagat
ttaaaaaaagaagttgataaattaaaagaagaaatcagtgctaaaaacaatccttatata
aaagacatactagctaaaacaaaaaaacaacagtgctcatag
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