Patella vulgata (common limpet): 126811027
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Entry
126811027 CDS
T09576
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pvul
Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvul03009
]
126811027
04121 Ubiquitin system [BR:
pvul04121
]
126811027
Ribosome biogenesis [BR:
pvul03009
]
Eukaryotic type
90S particles
Other 90S particles
126811027
Ubiquitin system [BR:
pvul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126811027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Sof1
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
eIF2A
ANAPC4_WD40
Beta-prop_DCAF12
WD_LRWD1
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
AAA_lid_6
Motif
Other DBs
NCBI-GeneID:
126811027
NCBI-ProteinID:
XP_050392458
LinkDB
All DBs
Position
1:77480510..77491639
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AA seq
444 aa
AA seq
DB search
MKIKCLSRNPDDFLRETKRDIHKVPRNYDPKLHPFEAPREYVRALNAAKLERVFAKPFLG
SLDGHRDSVSVIRKHPTSLSLLLSGAYDGEVRVWNITKRNCVKSVQAHDGLVNGVCGHPN
GEYIFSVGADKQIKQWNITVDGDLQDQPKSTILGRSVFQDIDHHGKDNFFATCGVGVNIW
DEERTEPIRYFTWGVDSIHHVKFNPVETNILGAAASDRSILLYDMRGSTPLRKVILKLRS
NAISWNPMEAFIFTVANEDYNCYTFDMRKLSIPLNVHRDHVAAVMDVDYSPTGKEFVTAG
YDHCLRIFKLDQGHSREVYHTKRMHRVHTVCWSLDDKYIMSGSEEMNIRLWKARAWEKLG
TLKSRESTALQYNDKLKTKFGNHPQVRRILKHRHVSKMIFHNTREIRKIREAAKKREQNR
MENSKIGTVQYTSERESHVIGEKE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaatgcttgagtagaaatccagatgattttttgagagaaacgaaaagagat
attcacaaagttccaagaaattatgatcctaaacttcatccatttgaagcaccaagggaa
tatgttagagctttgaatgcagccaagttagagagagtattcgcaaagccatttcttggc
tcactagatggtcacagagatagtgtcagcgtcatcagaaaacatccaactagtctttca
ttattattatctggtgcttatgatggcgaggttagagtgtggaatataactaaaagaaac
tgtgttaaaagtgtacaagctcatgacggtttagttaatggtgtttgtggacatccaaat
ggagaatatatcttttctgttggagctgataaacagattaaacaatggaatataacagtt
gatggtgatttacaggatcaacctaaaagtacaatattaggacggagtgtatttcaagat
atagatcatcatggtaaagataattttttcgctacatgtggtgttggtgttaatatctgg
gatgaagaaagaacagaacctatccgatattttacatggggtgtcgactccatacatcat
gttaaattcaaccctgtcgaaacgaatatattgggagcagcagcatcagatcgaagtata
ttattatatgacatgcgaggttccacgccactcagaaaagttattttaaaattacgtagc
aatgctatatcatggaatcctatggaggcttttatatttactgttgctaatgaagattat
aattgttatacgtttgatatgaggaaattatctataccactcaatgtacatagagatcat
gttgccgcagtaatggatgtagattattcaccaactggtaaagagtttgttaccgctggt
tacgatcactgtttacgtatatttaaactagatcaaggtcacagcagggaagtctatcat
acaaagagaatgcatcgtgttcatacagtatgttggtcattagatgataaatatattatg
tcgggttcagaagaaatgaatatcagattatggaaagctagagcctgggaaaaacttgga
acgttaaaatcaagagagagtacagcgttacagtataacgataaattaaaaactaaattt
ggaaatcatccacaagtaagacgaatattgaaacatcgtcatgtttctaaaatgatcttt
cacaatactcgagaaattagaaaaatacgagaagctgccaagaaaagggaacagaatcgt
atggagaatagtaaaattggaacagttcagtatacctcagaaagagaatcacatgtcatt
ggagagaaggagtaa
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