Patella vulgata (common limpet): 126811439
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Entry
126811439 CDS
T09576
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03440
Homologous recombination
pvul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126811439
03460 Fanconi anemia pathway
126811439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvul03032
]
126811439
03400 DNA repair and recombination proteins [BR:
pvul03400
]
126811439
Enzymes [BR:
pvul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
126811439
DNA replication proteins [BR:
pvul03032
]
Eukaryotic type
DNA Topoisomerases
126811439
DNA repair and recombination proteins [BR:
pvul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
126811439
FA (Fanconi anemia) pathway
126811439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_ribbon_recom
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
126811439
NCBI-ProteinID:
XP_050393002
LinkDB
All DBs
Position
2:30054539..30083308
Genome browser
AA seq
1041 aa
AA seq
DB search
MLKICVRFYSNIPTMVRVLNVAEKNDAAKCIAEVMSRGGYRKVFLLHIFSGKIAVVREGF
SKFNKIYEFDYNVFRQNCQMSMTSVSGHLLGLDFVGQYKKWYSCNPVQLFDIPVTKHCPD
NFIDIKRTLEREVKGCKYLIIWTDCDREGENIGYEVIQVCKEAKPSIQVYRARFSEITPH
AINRAIQNLGPPDKNVSDAVDVRSELDLRIGAAFTRFQTLRLQKVFPDVLSDQLISYGSC
QFPTLGFVVERYKQVEAFIPEPFWKIKVTHLNDEIKADFSWKRNRLFNHLACLVLYEQCT
ELPIATVVDVRSKSKSKWRPQALDTVEMEKLASRKLRINAKETMKIAEKLYTNGFISYPR
TETNIFPKELNLTALVEDQTRDPNWGAFAEGILQNGPNPRNGKKTDNAHPPIHPIKYTAT
LQGNEQKVYEFIVRHFLACVSQDAQGFETTVDIEIADEKFTASGLMIIAKNYLEVYPYEK
WNAKEIPVYNIGDKFEPSSIELISGETAAPPLLTEADLIALMDKHGIGTDATHAEHIETI
KSRSYVGLRPDGKFVPGHLGMGLVEGYDSMGYEMSKPNLRANLENDLKLICDGRKDKNIA
LQEQIQKYKQVFIQACEQAARLDEALAQYLGEARPFTAAQAPMPEIQPRVKTCPNCNQDM
VLKTKKDGKGFYIGCMGYPDCRNAIWLPDFVLEANVVDEICDRCQINKMKFKFKRGSVPP
MIEPDSLICIGGCDEMISEVLNIQRTRAPTQANPVNVNTSIRSQNGIPDSGYNSFNSTRS
NNSSFNSTRTNNSQSQNNSITRNTTFNRSNSNNGNKNYTTQAVANRGGNSRPALHLSQQN
NMNSGNSDGGHGSAIVCNCGDDGILLTVRKDGPNQGRQFYKCSKPTGTGCNFFLWADENT
TTVSNTTNNNNYTVNRQDNYNNRPPQANQWNNSLGDNIQCPCGLPAKSLTVQKDGPNKGR
PFYGCSKPRVESCGFFQWGDQPSDAGGGMGRGNGGGAGNNQMGYKRQGGAGPQTDGGGGV
KKRKCGICHVEGHTRKTCPQR
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaatttgtgtcagattctacagcaatattccaacaatggttcgagtactgaat
gtagcggaaaagaatgatgctgctaaatgtattgctgaagttatgtccagaggaggctat
cgaaaagtatttttacttcacattttttccggcaagatagcagtggtgagagaaggtttt
tcaaagttcaacaaaatctatgaatttgactataatgtgttccgtcagaattgccagatg
agtatgacatctgtttctggtcatttattaggccttgattttgtaggacaatataaaaaa
tggtattcatgtaatcctgttcaattatttgatattccagttacaaaacactgtccagat
aatttcattgatataaagcgtacgttggaaagagaagtaaaaggttgtaaatatttgatt
atatggacagattgtgatagagaaggagaaaatattggatatgaagttatacaagtctgt
aaagaagctaaaccttctattcaagtgtacagggcaagattttctgaaataactccacat
gctattaatcgtgccattcagaatctagggccaccagataaaaatgttagcgacgctgtt
gatgttcgttcagagcttgatcttagaataggagctgcattcactagatttcagacactt
cgattacagaaagtttttccagatgtattaagtgatcagttgataagttatggaagttgt
cagtttcctacattaggttttgttgtagaaagatataaacaagtagaggcctttattcca
gaaccattttggaaaataaaagttactcatttgaatgatgaaataaaagctgattttagt
tggaaaagaaatcgtctcttcaatcatttagcatgtctagtcctatatgaacaatgcaca
gagttacctatagcaactgttgttgatgtcagaagtaaaagtaaaagtaaatggagacca
caagctttagatacagtcgaaatggaaaagcttgcttcaagaaaattgcgaataaatgcc
aaagagacaatgaagatagccgagaaactgtacactaatggttttattagctatccacgt
acagaaactaatatatttcctaaagaactgaatttgacagctcttgttgaagatcaaact
agagatcctaattggggagcatttgctgaggggatattacagaatggaccaaatcctaga
aatggtaaaaaaacagataatgctcatccaccgatacaccccataaaatatacagctaca
ttacagggaaatgaacagaaagtgtatgaattcatagtgcgtcattttctggcttgtgtt
tctcaagatgcgcaaggctttgaaacaacggttgatattgaaatagcagacgaaaagttt
actgcatcgggactcatgataatagctaagaattatttagaagtttatccatatgaaaaa
tggaatgcaaaggaaattccagtatataatattggtgataaatttgaaccatcatcaatt
gagttgatcagtggtgaaactgcagcaccaccattacttactgaagctgaccttatagct
ttaatggataaacatggcattggtactgatgctacacatgctgaacatatagaaactatt
aaaagtcgatcttatgttggtttaaggccagatggtaaatttgtgccaggacatttaggc
atgggacttgttgaaggttatgattcgatggggtatgaaatgtctaaacctaatctacgt
gcaaacttagagaatgatctcaaactgatttgtgatggtagaaaagacaaaaatattgcc
ttacaagaacaaatacagaaatataaacaggtttttattcaggcatgtgagcaggcagca
agactagatgaagcccttgctcagtatttaggagaagcaagaccttttactgcagcacaa
gctccaatgcctgaaatacaaccaagagtaaaaacatgtcctaattgtaaccaagatatg
gtacttaaaaccaagaaagatggaaaaggtttttatattggatgtatgggatatccagac
tgtagaaatgcaatatggctgccagattttgtgctagaagcaaatgttgttgatgaaata
tgtgacaggtgtcaaatcaacaagatgaaatttaaatttaaacgaggatcagttccaccc
atgatagaaccagatagtttaatatgtattggtggttgtgatgagatgatatcagaagtt
ttaaatatacaaagaacaagagcaccaactcaagctaatccagtgaatgtgaatacatca
atacgaagtcagaatggtataccagatagtggttataatagttttaatagtacaagaagt
aataattctagttttaacagcacacgaactaataattcacaatcacaaaataactctatt
accagaaataccacattcaatagatcaaatagcaataatggcaataaaaactacacaact
caagcagttgcgaataggggaggtaattcacgtcctgcattgcatttatcacaacagaat
aatatgaatagtggtaatagtgatggtggacatggttcagctattgtgtgtaattgtggt
gatgatggtattttacttactgttagaaaagatggaccaaatcaaggtcgtcagttctat
aaatgtagtaaaccaactggtactggttgtaatttctttctgtgggcagatgaaaacaca
acaacagtcagtaatacaactaataataacaattatacagttaacagacaagataactat
aataacagaccaccacaagccaatcagtggaataattcattgggtgataatattcaatgt
ccatgtggtttaccagctaaaagtttaacagtacaaaaagatggtcctaacaaggggcgg
ccattttatggttgttcaaaacctagagttgaatcctgtggattttttcagtggggagat
caaccttctgatgcagggggaggaatgggaagaggaaatggtggtggagctgggaataat
cagatgggttataaaagacaaggtggggctggtcctcaaacagatggtggtggtggtgtc
aagaaaagaaaatgtggaatatgtcatgttgaaggtcatacaaggaagacatgcccacag
agatga
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