Patella vulgata (common limpet): 126812023
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Entry
126812023 CDS
T09576
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
pvul
Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvul04121
]
126812023
Ubiquitin system [BR:
pvul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
126812023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
126812023
NCBI-ProteinID:
XP_050394140
LinkDB
All DBs
Position
2:complement(21480897..21521046)
Genome browser
AA seq
1832 aa
AA seq
DB search
MDLMLHEWDYDVDRFSFEDSDRFEEDSLCSWLSEPESLCNNWRGWKRQNGGQTNLTSRSQ
DKVTPLVELSALAVACNIPFEVVEHYPQPIPEWLQLRIAFWSFPENEEDIRLYSCLSNGS
ADEFTKGDHLYKSKAVKEVIQIGFHLSATIVPPQTLNQAQGNKGYNVAVVFDRRRITSCN
CSCNSSAYWCSHVVAVCLYRIHQANSVCLRAPVSESLSRLHRDQLQKFAQYLISALPQQI
LPTAQKLLDELLSSQETAINTVYGAPDPTAGPPASEQTSWSLDESTLHENIKKTLVKFCV
PAPMVFSDVNYLSASAPPAAAEWQSLLRPLRGREPEGMWNLLSIVREMFRRHDSNSVPLL
EIVTDEVLQCEQILIWWFATKSSAPNNSAVVHITRSGNSSANATQHAAASLCEEIVTLWR
LGALNPKLSPIQRDDLCTKFKDWHMCTIEKVRKARSSSSSGSGNVKKNDIENFPGFKPAI
EACYLTWEDYPIRGVTYSDKEGARWVYHFSCKGSDKTSRVQPMTICSRDIISTDNSTHVA
HTKRSQEQRSRVRHDSTVHINEVDGAISSGSEGFCEPDRHFRDSDSSYDNKGLHSRSNSL
DEAESNAVFENGGLDNGEDQVEIQGDDVNNVNSVNDLIEEIDGALGAIADIQLAEASQAL
PSGANNTEHSTSESQQSGDEYQMYFYDTKAKVVETKKKNDEPNYFFGIKKFEDIQDTSKG
VYNQKILFARAEALHAHGHTKDACKLAKQLAEEMLANPPDLLAESANVPTPKSKKKKALN
NISMLASATLAKAAFLVSVLSEDQECHHLAFQVGMFGLDLPRPPASCKPLEVKLAYQESE
LLQMLKKIPLGVDELDILRARAQELVDGKITARGEALLPLHLATFIFDSLCLTARGAPDE
KLGFEAAVTALGLKANVSEAEHPLLCESTRRQRGELAMAMLIQYKDDQVRLSKIMDKLLD
KEVHQQYKAPSLVTYLVNRPSASQHTTTSSPNNSTITRETHVTPSPQPSTSQRSNIDTLF
VPERNRMATSSNGEDNEGTGPVNVDGLPPHSLPLPTGGARPKTTYTLTGRYNSGKDTDSS
ALEEEDDIKALDAKIRCLGMKKKPSQGMASIDSSAPETTSSDNSPTMIRRNFGKHQGPGS
DSGSSGESDSLGSSSSGDKGGRGIVRDNESPPSPFVNRNLPPHIVVDSRSSTPNVKGLRF
KGKNRIMPTVPNQPSEASAHFMFELAKTVLTKAGGNSSTSLFTQPTSNSNPPGPHRNLHI
CAFQIGLYALGLSNCVSPNWLSRTYSSHVSWITGQAMDIGSVAIRILIDTWEGHLTPPEV
ASLADRASRGRDPNMVKAAAELALSCLPHAHALNPTEVSRALFQCKEQSREMLERACLAV
ETAAKGGGVFPEVLFDVAKHWYKVSEDVAQSTDVSETNNHLLQQAELDNNVGGTAVIQPP
LCNTPDRNSPATHHVLPYCEAPPQNQVPVSASPQLLPQPNGQMAPQTVVLPYPISQAGPH
HPQLPHSYVPPYSYMQQVPAAFTHQYTQHHLPIHSIHPAYMAPYAFQNPTQFVNMQSLPA
HATVYHTSPVRPMGPTVQVYQAGPGCQVNTVQNLTSTSTGHLHSIHCPVDTTSAAGNTTN
TGMIQAASNQQLHAHSLSQNPVQLNYVMAAFRVGMSAMEMLARRVHDDRPQTKYARNPPY
GEDVKWLLSIAMKLGTYYIQQFCASAVNAVVSPHILYDLAMEAARFMAKHNNTSHPTNPT
HVSNQLRSNILNSLFQKCLQMFMQCAHQRIHHITQADYDEFVTIVCRARNAFYMAPGGMV
QFHELLQSLRRSKSCRKELWQRIVNGLATGTV
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggacttgatgttacacgaatgggactacgatgttgataggttttcattcgaggatagc
gatcgattcgaagaagattccttatgttcttggctaagtgaacctgaaagtctttgcaac
aactggcgaggttggaaaaggcaaaatggtggtcagactaatcttaccagtcgttcacag
gataaggttacaccattagtggaattgtctgctttggcagtggcatgtaacatcccattt
gaagtggtagaacattacccccaaccaattccagaatggctgcagttacggatagctttt
tggagtttcccagaaaacgaagaagatataagactctattcctgtttatcaaatggaagt
gcagatgaattcaccaagggagaccatctatataaaagtaaagctgtaaaagaagttata
caaataggttttcatctgagtgccactattgtaccaccacaaacattaaatcaagctcag
ggaaataaaggttataatgtggcagttgtatttgatagacgtagaataacatcatgtaat
tgtagctgtaatagttcagcttattggtgttctcatgttgttgctgtctgtctgtataga
attcaccaggctaattctgtatgtctacgagctcctgtatccgagtccttgtctagacta
cacagagatcagttacagaagtttgcccagtatctaatcagtgctctaccacaacagata
ttaccaacagctcagaaattattagatgaattgttatcatctcaagaaacagccattaat
acagtttatggtgcaccagatcctacagctggcccacctgctagtgaacagacatcatgg
tcacttgatgaatcaacacttcatgaaaatataaaaaaaactctagtcaaattttgcgta
ccagctccaatggttttcagtgatgtaaactatttgtccgctagtgccccacctgctgct
gctgaatggcagagtttattacgcccattacgtggtcgtgagccagagggcatgtggaat
ttattgtctatagtaagagagatgtttagacgccatgacagtaattcagtaccattacta
gaaatagtaactgatgaagtactacaatgtgagcagattttgatctggtggtttgcaaca
aagtcatctgctccaaacaacagtgcagtagttcatattacaagaagtggaaatagttca
gctaatgctacccagcatgcagctgctagtttatgtgaagagatagtgactctatggaga
ttgggtgcattaaatcctaaactctcacccattcaaagagatgatctatgcactaaattt
aaagactggcacatgtgtaccatagaaaaagtgaggaaggctagaagctctagctccagt
ggtagtggcaatgttaaaaagaacgatatcgaaaacttccctggttttaaacctgctatt
gaagcttgttatttaacatgggaagattaccctattcgaggtgtgacgtattcggataag
gaaggggcacgctgggtttatcactttagctgtaaaggttctgataaaacctccagggta
caaccgatgaccatctgctcaagggacattatcagcacagataactctacacatgttgct
catactaaacgatctcaggaacagcgctctcgggttagacatgacagtactgtacatatc
aatgaagtggatggagctatcagttcaggatcggaaggattttgtgaacccgacagacat
tttcgtgattcagattctagttatgataataaaggattacattctagaagtaattctttg
gatgaagccgagagtaatgctgtatttgagaatgggggattagataacggggaagatcaa
gttgaaatacaaggagacgatgtaaataatgtaaatagtgtaaatgatctcatagaagaa
attgatggagccttaggagccattgcagacatacaattagcagaagctagtcaagctcta
cctagtggggctaataacacagaacattctacctcagagtcacaacagtcaggtgatgag
tatcaaatgtacttttatgacactaaagccaaagtagttgaaaccaagaaaaagaatgat
gagccaaattatttttttggaataaagaagtttgaagatatacaagatacatcgaaaggt
gtttataatcagaagattctgtttgctagagctgaagctttacatgctcatggtcatact
aaagatgcttgtaaactagctaaacagttagcagaagaaatgttagctaatccaccagat
ctattagcagaatcagctaatgtacctacaccaaaatccaagaagaagaaagctttgaat
aacatcagtatgttagctagtgctacattagctaaagctgcctttctggttagtgtattg
tctgaagaccaagaatgtcatcatcttgcctttcaagtaggaatgtttggtttagattta
cctagaccacctgcttcatgtaaaccgttagaggtaaaattagcttatcaagaatctgag
ttgttacaaatgttaaagaagatacctctaggtgtagatgaattagatatattgagagct
agagcccaagaattagtagatggtaaaataacagctagaggagaagcattattaccacta
catttagcaacatttatctttgattctctatgtctaacagctcggggtgcccctgatgag
aaacttggatttgaagctgctgtcactgccctaggtttgaaagctaatgtatcagaagca
gaacatccgttattatgtgaaagtaccagaagacaaagaggagagttggcgatggccatg
ttaattcaatataaagatgatcaagttagacttagcaagataatggataaattacttgat
aaagaagtacatcaacagtataaagcacctagtttagtaacctacctagttaaccggcct
tctgctagtcaacatacaacaacatctagtcctaataactctaccataacacgagaaaca
catgttaccccctcccctcaaccatctacatcacaacgatctaatatagacaccttattt
gtaccagagagaaatcgtatggcaacctctagtaatggggaagataatgaaggaacagga
ccagttaatgtggatggtttacctccccattctttaccattacccactggtggtgccaga
cctaaaacaacttatactcttactggtagatataacagtggtaaggatacagatagttca
gctctagaagaagaagatgatattaaagcattagatgctaaaataagatgtctgggtatg
aagaaaaaaccatcacaaggtatggctagtattgatagtagtgcaccagaaactacatct
agtgacaactcccctactatgatacgtagaaactttggtaaacatcaaggtcctggtagt
gatagtggtagtagtggagaaagtgattcacttggatcttctagttctggagataaaggt
ggaagaggaattgtccgagataatgaaagtcctccaagtccgtttgtaaatagaaatcta
ccacctcatatagttgttgattctagaagctctactcctaatgttaagggtttgaggttt
aaaggtaaaaatcgtatcatgccaactgtaccaaaccaaccatctgaagcttcagcacat
tttatgtttgaattggccaaaactgttttaacaaaagcaggcggtaatagttctacgtct
ctgttcacacaaccaaccagtaacagtaatccaccaggtcctcatcgtaatctacatatc
tgtgcattccaaattggtttatatgctctaggactcagtaactgtgtatcaccaaattgg
ttgtctcgaacctactcgtcacatgtgtcatggataacaggtcaagctatggatattgga
agtgttgctattagaattctaatagatacatgggaaggtcatcttacgccacctgaagtt
gcgtctttggcagacagagcctctcgaggtcgtgatcctaatatggtgaaggctgctgca
gaactggccttatcttgtctaccacatgcccatgctctgaatcctacagaagtcagtaga
gctttattccaatgtaaagaacagagtagagagatgttggagagagcttgtctagctgta
gaaactgctgctaaaggtggaggtgtcttccctgaagtcttgtttgacgtagctaaacat
tggtataaagtatctgaggatgtggctcagagtacagatgttagcgaaaccaacaatcat
ttacttcaacaagctgaattagataataacgttggtggtactgctgtcatacaaccacca
ttatgtaatacgcctgacagaaatagtccagcaactcatcacgttttaccatactgtgaa
gctccaccacaaaatcaagttcctgtttctgctagtcctcaactccttccacaacccaac
ggtcagatggctccccagactgttgttcttccttatccgatctctcaggctggaccccat
catccccagctacctcattcatatgtaccaccatatagttacatgcaacaagtgcctgct
gccttcacccaccagtatacacaacatcatttacccatacacagtatccatcctgcgtac
atggccccgtatgccttccagaatccaacccagtttgtcaatatgcaaagccttcctgcc
catgctacagtatatcacacatcacctgtacgacctatgggcccaacagtacaggtatat
caggcaggacccggttgtcaggttaacactgtacagaatctaactagtacttcaactgga
catttacactccatccattgtccagttgatactacatccgcggctggtaatactacaaac
actggtatgatacaagctgctagtaatcaacaattgcatgctcattctctttcacaaaat
ccagtccaactgaattatgtgatggctgcgtttagagttggtatgtcggctatggagatg
ttggctagaagagtacatgatgatcgtccacaaaccaaatatgctagaaatcccccgtat
ggtgaagatgtcaaatggcttctcagcattgccatgaaactaggaacatattatattcaa
cagttttgtgcaagtgcagtaaatgctgtagtcagtcctcatatattgtatgatttggca
atggaagctgctagatttatggctaaacataacaacacttcacatcctaccaacccaact
catgtatctaaccagttacgctccaacattctaaattctctcttccagaaatgtttacaa
atgtttatgcaatgtgcccatcagaggatacaccatataactcaagctgattatgatgaa
tttgttacgattgtatgcagagcaagaaatgctttctacatggcaccagggggaatggta
cagtttcatgaacttctacagagtttacggcgatctaaatcctgtcgtaaagaactgtgg
caacgtattgtaaatggccttgcaactggaactgtatga
DBGET
integrated database retrieval system
