Patella vulgata (common limpet): 126812052
Help
Entry
126812052 CDS
T09576
Name
(RefSeq) exodeoxyribonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
126812052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvul03400
]
126812052
Enzymes [BR:
pvul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
126812052
DNA repair and recombination proteins [BR:
pvul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
126812052
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
126812052
NCBI-ProteinID:
XP_055954604
LinkDB
All DBs
Position
2:complement(12312886..12325370)
Genome browser
AA seq
340 aa
AA seq
DB search
MPKRTKKAVVKDEDNEDVAEAKPARKRQKKEPAEDAKPAKTPKGKKEKEEENGDGDTPAL
KKVPSVDVSGMDFTSDSKTEDGRTWNVKIASWNINGIRAWLSKDGTSYIKAEAPDVMCLQ
ETKCDTSKIPADCKIEGYTAHWLSGDKEGYSGVGMYTKTKPINVTYGIDVSKHDNEGRVI
TAEFEKYYVVTAYVPNSGRGLPRLNYRTKEWDVDFIKYLKDLDAKKPVIMCGDLNVAHLD
IDLKNPKTNKKNAGFTPQEREGFTNLLNEGFVDTYRKLYPDKEAAYTFWAYFMNNRAKDC
GWRLDYFVVSERLTKDLCDSVIRKHVMGSDHCPVVLYMNL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagaacaaagaaagcggttgtgaaggatgaagacaatgaagatgtagctgag
gcaaaaccagccagaaaaagacagaaaaaagaaccagcagaggatgctaagcctgccaaa
acccctaaaggcaagaaggaaaaggaagaagaaaatggtgatggagatacaccagcattg
aagaaggtaccatcagttgatgtgtctggaatggattttacatctgattctaaaacagaa
gatggtagaacatggaatgtaaagatagcatcatggaatataaatggtatccgagcatgg
ttgtcaaaagatggaacaagttatattaaagcagaggccccagatgttatgtgtttacaa
gaaacaaaatgtgatacatctaaaataccagctgattgtaaaatagaaggctatacggct
cactggttatcaggggataaagaaggatattcaggtgttgggatgtatacaaaaacaaaa
cctataaatgttacctatggtatagatgtttcaaagcacgataatgaaggaagagttatt
acagctgaatttgagaagtattatgttgttactgcatatgtacctaacagtggtagagga
ttacctagattaaactacagaacaaaagaatgggatgtagatttcattaaatatctaaaa
gatttagatgcaaagaaaccggttataatgtgtggtgatctaaatgtggctcatcttgat
atagatctgaagaatcctaaaactaacaagaagaatgcaggttttacaccacaagaaaga
gaaggttttactaatctattaaatgaaggatttgttgatacgtatagaaagttatatcca
gataaagaggcagcctatacattctgggcttattttatgaataatagagctaaagactgt
ggatggagattagattattttgttgtatcagaaagattaaccaaagatctgtgtgatagt
gttattagaaaacatgtcatgggtagtgatcattgtccagttgtactctatatgaatctg
taa
DBGET
integrated database retrieval system