KEGG   Patella vulgata (common limpet): 126812084
Entry
126812084         CDS       T09576                                 
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul04512  ECM-receptor interaction
pvul04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    126812084
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    126812084
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvul04147]
    126812084
   00536 Glycosaminoglycan binding proteins [BR:pvul00536]
    126812084
Exosome [BR:pvul04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   126812084
Glycosaminoglycan binding proteins [BR:pvul00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   126812084
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 126812084
NCBI-ProteinID: XP_050394226
LinkDB
Position
2:85344397..85391094
AA seq 1120 aa
MWGIISGKIQCIFIIYVLTLKQAGAQEWPDVLYRPEGRCNRGCSCRDLKGEMGFTGMKGQ
PGMDGGRGSTGPEGHPGLKGQKGETGYVGNDGEKGELGPAGSQGVPGPSGLPGPIGPRGA
QGVPGPRGDDGMVGPRGGKGEAGFNGEMGPRGYRGPVGLPGLAGSNGKNGQDGELGPSGP
RGLPGCDGLNGSQGLDGRHGRPGSPGPRGPPGISVRGPPGPPGSSGQFSVEGASFIQEWI
QKGGAIPEGEKGQKGERGYTGIGVAGREGEMGPPGPRGFPGEQGERGFTGLPGTSGQPGQ
PGETVFGERGLKGDPGERGIPGRDGITGLPGLKGDLGVGRPGLDGYPGEPGPKGDRGPRG
LEGQSVRGLPGLQGRQGPQGPPGPVGVGRPGPAGLDGLPGPKGNPGRDGLEGLPGRKGES
GEPGLPGRAGADATSTGITFGRPGPEGPRGLPGIGIKGEAGRDGIPGEPGGPGRDGIPGS
RGEDGLPGLPGPQGEGLPGPKGARGGPGFPGLPGDDGIPGERGPRGYTGETGQPGLDGLP
GTVGPPGLEGPSGQKGERGFPGSDGREGLSGPPGDIGPRGFTGPKGSPGTSLLGVKGDPG
EPGIGLPGPPGIDGLPGLRGDPGPVGPTGDDGLSGSKGERGIPGFRGKPGVPGPPGVSGE
IVLGAKGEKGNAGLNGLPGVPGDSGPVGRPGSPGPRGELGMTGAPGLDGLTGESGRPGFD
GVPGEPGPQGSPGRDGRPGQDGLQGLPGQRGEQGEPGIGEPGPRGYPGEKGESIVGPRGQ
TGPRGDLGIPGLDGERGLPGLPGIKGSRGEAGFGIEGPKGEVGEPGLGIQGPRGFPGEEG
RPGERGPRGPDGLPGFGEPGRPGEPGIGREGRKGDQGEPGFGEIGPPGPIGIPGPSAYVY
ARHSQSPRDTGCYNKHPVLWQGYSLLHTEVEGKAHEQDLGAAGSCLPHFAPMPTLFCNIH
DTCYYASRTATSYWLSTDYDMPMMPVGGEEMYRYVSRCAVCQSPTPMIAVHSMTTRVPFC
PEGWAPMWAGYSFIMHAIGSAAGGQSLSSPGSCLETFTTRPFIECTSRGQCHYFSDKFSF
WLAGATERERLTPEKETLKGNQHLRRVGRCVVCMVKPPGE
NT seq 3363 nt   +upstreamnt  +downstreamnt
atgtggggaataatatcaggaaagattcaatgtatttttattatttatgtacttacattg
aaacaagcaggtgcccaggaatggccggacgtcctatacagaccagagggtcggtgtaac
aggggttgttcatgtcgagatctgaaaggagaaatggggtttacaggaatgaagggtcag
cccggaatggatggaggaagaggatcaactggacctgaaggtcatcctgggttaaaaggt
caaaagggtgaaactggatacgtcggaaatgatggcgaaaagggcgaattgggtccagcc
gggtcgcaaggtgtacctggaccatcgggactaccgggaccaatcggaccacgtggagct
caaggtgtacctggtcccagaggtgatgatggtatggttggaccacgtggtgggaagggt
gaagctggttttaatggtgagatgggaccacgtggctatcgtgggccagttggattacct
ggtttagcaggaagtaatggaaaaaatggacaagatggtgaacttggaccatcgggacct
cgtggtcttcctggttgtgatggattgaatggtagccaaggacttgatggacgacatggt
agacctggttcaccaggtcctagaggtcctcctggaatatctgttcggggtcctcctgga
cctcctggttcatcaggacaattctctgtggaaggggccagttttattcaagaatggatc
cagaaaggaggggctatacctgaaggtgaaaagggacaaaaaggagaacggggttataca
ggaattggtgtagctggtcgagaaggtgaaatgggaccaccaggacccagaggttttcca
ggagagcaaggagaacggggtttcacgggtcttccgggtacatcaggtcaacctggacaa
ccaggggaaacagtgtttggagaacgcggtctaaagggtgaccctggtgaacggggtatc
cctggtcgtgatggtattactggtttacccggattgaaaggagacctcggtgttgggcgt
cctggacttgatgggtacccaggggaacctggtccaaaaggagatcggggaccgagaggt
ttggaaggacagtctgttcgaggtctgccgggtttgcagggtagacaaggtcctcagggt
ccccctgggccagtaggtgtcggtcgaccagggcctgctggccttgatgggctacctggc
ccgaagggaaatcccgggagagatggtttagagggattgcccggtagaaaaggagaatct
ggagaacctggtcttcccggacgagccggagctgatgctacaagtactggtataactttt
gggagacctggacctgaaggacctagagggttacctggtattggtattaaaggagaagcc
ggacgagatggaattccaggagagcccggtggtcccggcagggatggtatacctggttcg
agaggcgaggatggattacctggattacccgggcctcaaggagaaggattaccaggacca
aaaggagcaagaggaggccctggcttccctggattaccaggtgatgacggcataccagga
gaaagggggcctcgtggttatacaggagaaaccggccaaccaggattagatggactgcca
ggaacagtcggtcctcccggtcttgaggggccatcaggacagaaaggagaaaggggtttt
ccgggatctgatggacgtgaaggattgtccggacctcccggggatataggaccacgggga
tttacgggtccaaaggggtcaccgggaacttctttattaggcgtgaaaggggatccagga
gagccggggataggacttccagggcctccaggaatagatgggcttcctggactccgtggt
gacccaggtccggttggaccaaccggcgacgacggattgtcgggtagtaaaggagaaaga
ggtataccaggatttcgaggcaagcctggagttccaggcccaccaggagttagtggggaa
attgtattgggagcaaaaggagagaaaggtaacgctggtctcaatggattgcctggagta
ccaggtgattctggaccagtaggacgccctggatcaccgggtcctcgtggagaacttggt
atgactggggctcccggattagatggtttaactggtgagtcgggaaggccgggttttgat
ggtgtgccaggagaacctgggcctcagggttctccgggacgtgacgggagacctggacaa
gatgggttacagggtctaccgggacaaagaggagaacagggagaaccaggaattggcgaa
ccaggaccaagaggatatcctggggaaaagggtgaatctattgttggaccacgtggacag
acaggaccacggggagacctgggtataccaggtttagatggtgaacgaggtctgcccggt
ttacctgggattaagggttcccgtggagaggcaggttttggcattgaaggacctaagggt
gaagttggtgagcctggtctgggaattcaaggaccccgtggatttcctggtgaggaaggt
cgtccaggagaaagaggaccacgcggaccagatgggctaccaggttttggcgaaccagga
cgtcctggtgaacctggtattggaagagaaggccgtaaaggagatcagggagaaccgggt
ttcggtgaaataggacccccagggcccataggtataccaggtccctcggcgtatgtttat
gctcgacacagtcagtcaccgagagatacaggttgttacaataaacaccctgtcttatgg
cagggctatagtttattacatacagaggtagagggcaaagctcacgaacaagatttaggt
gcagccggatcatgtctgcctcatttcgcaccgatgccaactttattctgtaatattcac
gatacgtgttattatgccagtcggaccgcaacaagttactggttatctaccgactacgat
atgccgatgatgccggtcggaggagaagagatgtacagatacgtcagtcggtgtgccgtc
tgtcagtcaccaactcccatgatagcggtacatagtatgaccacacgtgtccccttctgt
ccggagggttgggcacccatgtgggcaggctacagttttattatgcatgctattggatcc
gcggccgggggtcaatccctctccagtcctggtagttgtctagaaacatttacaacacga
ccatttatagagtgcactagccgaggacagtgtcattatttctcggataaatttagtttt
tggttagccggggccacagagagagaacgacttacccccgaaaaggaaacgttgaaggga
aatcaacatctacgacgtgtcggacgctgcgttgtgtgtatggtcaagcccccaggagaa
taa

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