Patella vulgata (common limpet): 126812084
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Entry
126812084 CDS
T09576
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul04512
ECM-receptor interaction
pvul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126812084
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126812084
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvul04147
]
126812084
00536 Glycosaminoglycan binding proteins [BR:
pvul00536
]
126812084
Exosome [BR:
pvul04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126812084
Glycosaminoglycan binding proteins [BR:
pvul00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126812084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126812084
NCBI-ProteinID:
XP_050394226
LinkDB
All DBs
Position
2:85344397..85391094
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AA seq
1120 aa
AA seq
DB search
MWGIISGKIQCIFIIYVLTLKQAGAQEWPDVLYRPEGRCNRGCSCRDLKGEMGFTGMKGQ
PGMDGGRGSTGPEGHPGLKGQKGETGYVGNDGEKGELGPAGSQGVPGPSGLPGPIGPRGA
QGVPGPRGDDGMVGPRGGKGEAGFNGEMGPRGYRGPVGLPGLAGSNGKNGQDGELGPSGP
RGLPGCDGLNGSQGLDGRHGRPGSPGPRGPPGISVRGPPGPPGSSGQFSVEGASFIQEWI
QKGGAIPEGEKGQKGERGYTGIGVAGREGEMGPPGPRGFPGEQGERGFTGLPGTSGQPGQ
PGETVFGERGLKGDPGERGIPGRDGITGLPGLKGDLGVGRPGLDGYPGEPGPKGDRGPRG
LEGQSVRGLPGLQGRQGPQGPPGPVGVGRPGPAGLDGLPGPKGNPGRDGLEGLPGRKGES
GEPGLPGRAGADATSTGITFGRPGPEGPRGLPGIGIKGEAGRDGIPGEPGGPGRDGIPGS
RGEDGLPGLPGPQGEGLPGPKGARGGPGFPGLPGDDGIPGERGPRGYTGETGQPGLDGLP
GTVGPPGLEGPSGQKGERGFPGSDGREGLSGPPGDIGPRGFTGPKGSPGTSLLGVKGDPG
EPGIGLPGPPGIDGLPGLRGDPGPVGPTGDDGLSGSKGERGIPGFRGKPGVPGPPGVSGE
IVLGAKGEKGNAGLNGLPGVPGDSGPVGRPGSPGPRGELGMTGAPGLDGLTGESGRPGFD
GVPGEPGPQGSPGRDGRPGQDGLQGLPGQRGEQGEPGIGEPGPRGYPGEKGESIVGPRGQ
TGPRGDLGIPGLDGERGLPGLPGIKGSRGEAGFGIEGPKGEVGEPGLGIQGPRGFPGEEG
RPGERGPRGPDGLPGFGEPGRPGEPGIGREGRKGDQGEPGFGEIGPPGPIGIPGPSAYVY
ARHSQSPRDTGCYNKHPVLWQGYSLLHTEVEGKAHEQDLGAAGSCLPHFAPMPTLFCNIH
DTCYYASRTATSYWLSTDYDMPMMPVGGEEMYRYVSRCAVCQSPTPMIAVHSMTTRVPFC
PEGWAPMWAGYSFIMHAIGSAAGGQSLSSPGSCLETFTTRPFIECTSRGQCHYFSDKFSF
WLAGATERERLTPEKETLKGNQHLRRVGRCVVCMVKPPGE
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtggggaataatatcaggaaagattcaatgtatttttattatttatgtacttacattg
aaacaagcaggtgcccaggaatggccggacgtcctatacagaccagagggtcggtgtaac
aggggttgttcatgtcgagatctgaaaggagaaatggggtttacaggaatgaagggtcag
cccggaatggatggaggaagaggatcaactggacctgaaggtcatcctgggttaaaaggt
caaaagggtgaaactggatacgtcggaaatgatggcgaaaagggcgaattgggtccagcc
gggtcgcaaggtgtacctggaccatcgggactaccgggaccaatcggaccacgtggagct
caaggtgtacctggtcccagaggtgatgatggtatggttggaccacgtggtgggaagggt
gaagctggttttaatggtgagatgggaccacgtggctatcgtgggccagttggattacct
ggtttagcaggaagtaatggaaaaaatggacaagatggtgaacttggaccatcgggacct
cgtggtcttcctggttgtgatggattgaatggtagccaaggacttgatggacgacatggt
agacctggttcaccaggtcctagaggtcctcctggaatatctgttcggggtcctcctgga
cctcctggttcatcaggacaattctctgtggaaggggccagttttattcaagaatggatc
cagaaaggaggggctatacctgaaggtgaaaagggacaaaaaggagaacggggttataca
ggaattggtgtagctggtcgagaaggtgaaatgggaccaccaggacccagaggttttcca
ggagagcaaggagaacggggtttcacgggtcttccgggtacatcaggtcaacctggacaa
ccaggggaaacagtgtttggagaacgcggtctaaagggtgaccctggtgaacggggtatc
cctggtcgtgatggtattactggtttacccggattgaaaggagacctcggtgttgggcgt
cctggacttgatgggtacccaggggaacctggtccaaaaggagatcggggaccgagaggt
ttggaaggacagtctgttcgaggtctgccgggtttgcagggtagacaaggtcctcagggt
ccccctgggccagtaggtgtcggtcgaccagggcctgctggccttgatgggctacctggc
ccgaagggaaatcccgggagagatggtttagagggattgcccggtagaaaaggagaatct
ggagaacctggtcttcccggacgagccggagctgatgctacaagtactggtataactttt
gggagacctggacctgaaggacctagagggttacctggtattggtattaaaggagaagcc
ggacgagatggaattccaggagagcccggtggtcccggcagggatggtatacctggttcg
agaggcgaggatggattacctggattacccgggcctcaaggagaaggattaccaggacca
aaaggagcaagaggaggccctggcttccctggattaccaggtgatgacggcataccagga
gaaagggggcctcgtggttatacaggagaaaccggccaaccaggattagatggactgcca
ggaacagtcggtcctcccggtcttgaggggccatcaggacagaaaggagaaaggggtttt
ccgggatctgatggacgtgaaggattgtccggacctcccggggatataggaccacgggga
tttacgggtccaaaggggtcaccgggaacttctttattaggcgtgaaaggggatccagga
gagccggggataggacttccagggcctccaggaatagatgggcttcctggactccgtggt
gacccaggtccggttggaccaaccggcgacgacggattgtcgggtagtaaaggagaaaga
ggtataccaggatttcgaggcaagcctggagttccaggcccaccaggagttagtggggaa
attgtattgggagcaaaaggagagaaaggtaacgctggtctcaatggattgcctggagta
ccaggtgattctggaccagtaggacgccctggatcaccgggtcctcgtggagaacttggt
atgactggggctcccggattagatggtttaactggtgagtcgggaaggccgggttttgat
ggtgtgccaggagaacctgggcctcagggttctccgggacgtgacgggagacctggacaa
gatgggttacagggtctaccgggacaaagaggagaacagggagaaccaggaattggcgaa
ccaggaccaagaggatatcctggggaaaagggtgaatctattgttggaccacgtggacag
acaggaccacggggagacctgggtataccaggtttagatggtgaacgaggtctgcccggt
ttacctgggattaagggttcccgtggagaggcaggttttggcattgaaggacctaagggt
gaagttggtgagcctggtctgggaattcaaggaccccgtggatttcctggtgaggaaggt
cgtccaggagaaagaggaccacgcggaccagatgggctaccaggttttggcgaaccagga
cgtcctggtgaacctggtattggaagagaaggccgtaaaggagatcagggagaaccgggt
ttcggtgaaataggacccccagggcccataggtataccaggtccctcggcgtatgtttat
gctcgacacagtcagtcaccgagagatacaggttgttacaataaacaccctgtcttatgg
cagggctatagtttattacatacagaggtagagggcaaagctcacgaacaagatttaggt
gcagccggatcatgtctgcctcatttcgcaccgatgccaactttattctgtaatattcac
gatacgtgttattatgccagtcggaccgcaacaagttactggttatctaccgactacgat
atgccgatgatgccggtcggaggagaagagatgtacagatacgtcagtcggtgtgccgtc
tgtcagtcaccaactcccatgatagcggtacatagtatgaccacacgtgtccccttctgt
ccggagggttgggcacccatgtgggcaggctacagttttattatgcatgctattggatcc
gcggccgggggtcaatccctctccagtcctggtagttgtctagaaacatttacaacacga
ccatttatagagtgcactagccgaggacagtgtcattatttctcggataaatttagtttt
tggttagccggggccacagagagagaacgacttacccccgaaaaggaaacgttgaaggga
aatcaacatctacgacgtgtcggacgctgcgttgtgtgtatggtcaagcccccaggagaa
taa
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