KEGG   Patella vulgata (common limpet): 126814392
Entry
126814392         CDS       T09576                                 
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
pvul  Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvul04121]
    126814392
   03400 DNA repair and recombination proteins [BR:pvul03400]
    126814392
Enzymes [BR:pvul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     126814392
Ubiquitin system [BR:pvul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126814392
DNA repair and recombination proteins [BR:pvul03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    126814392
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 Prok-RING_4 zf-C3HC4_4 ResIII RING_XB3-XBAT31 zf-Nse zf-rbx1 U-box zf-ANAPC11 Baculo_IE-1 HDA2-3 zf-RING_11
Other DBs
NCBI-GeneID: 126814392
NCBI-ProteinID: XP_050395446
LinkDB
Position
3:80053703..80089351
AA seq 1375 aa
MPRFRSRNQFGGWNTWNNNNFRSNWGIGSTEGRGDGGGGRKKKKSRKRQRTWEFTNEDVS
WLGNLVGAQGRDIARHHVIPGLDDGDEDLPVVDLTQEESRIDCNLGTVNGDIVGLQYYKG
TVNIGEMVNLEREPHNKYDRNAIRVINMDGQQVGHIKRELAKALAFVLDNKLARVEGIVP
RGSNNTYTMPINITLWGQTTANNRSEAVSVLKYHGYSVTNAGLSSKVTIGSMPGTSTGGI
SVSDYSHIQTRRTFLSQTEVRNELDKLFDTLEEGDKTTMTEPAVAIKTPLYPHQKQALNW
MICKENNEALPPFWEKRGNRYFNSLTVFTSNKQPRTVHGGILADDMGLGKTLEVISLILT
NFCKGQPLAIPVPGRNRYSQKPQRRKLKAKKISKQPLSQKKGFEKKAAKNFGSDSEEEDL
LRKQIRKMLASKAPGGCVSSDSDCDGKDTVMDPDIIFISDDSPECKPSQQMPFTLKPKPD
LVLNKPVSVTSEPIVLFDDPVTEEIVFPEQVADIHPSVLCNPKPEPIKTETVPCKSKSVD
MEPITIIDEPVSPEPIFIVKKSKPIKSKQKAVKQKAVSEPVESVRRSRRAVKQPARYVDD
GDDDTEMEKPATKRSRKEDIQNVEDSVKDKSIKEPIIIDLSTPTPVKPLPESSQIASLPL
KIPGFQPPQLAICWSDESRNKTPISSLTASTTHNATVRSNATQQSEPPVNKGKGKGKKKG
KGKGKKLTNQVEDDAPPLPSLPAEFNDENNPPVKSQSIDGSNFISSDDSASSDEDWLPEL
GSQDLPYNCDKNGSDDDILPDLVSKELPFNIDKSVMSKCDSTTGRIKSCGPRTTLIVCPL
SVMNNWVSQLEEHLRRDVHLEIYTFYGINRTTDNNLLESQDIVISTYGTVASDFKSTDSV
LKKVHWLRIILDEGHYIRNAKTVMCQAILELKAERRWVLTGTPIQNSIKDLFSLVNFLKI
SPLTDPQWWIRTIERPIALGEETAIKRVQALMANIALRRTKNQQVNGKALVELPARDVFT
EHVTLSEDERKLYSAMQTEGKLIISRYFQEGTLLHHYSQVLAILLRLRQLCIHPMLCSKA
AHGVQRAMEMLGMTKNGPTVEVDDETKKKLIDALMDVLNSGSDEECPICLESLTSPVITP
CAHVYCRACITNVINVGNPNAACPLCRGELKEDKLIEVPKEQDQIQDNLIITDENYQSSS
KVDALLKSLVNLRSEDPTVKSIIVSQFTSLLNLIEIPLKLNGFKFARLDGTMTNKKRIEN
IDIFMDPSPGSPTIFLLSLKAGGIGLNLTAASRVFLMDPAWNPAAEEQCFDRCHRLGQKR
DVIITKFIVQDSVEEKMLELQDRKRELMQGAFSKKQSANERRANRVQDIRNLLDM
NT seq 4128 nt   +upstreamnt  +downstreamnt
atgccacgcttcagaagcagaaatcaatttggtggttggaatacttggaacaataataac
tttcgctcaaattggggaattggcagtactgaaggaagaggtgatggaggtggtggtcgt
aaaaagaagaaaagcagaaaacgccaacgaacttgggaatttacaaatgaagatgtgagt
tggttagggaatcttgttggtgctcagggacgagatattgcacgtcatcatgttatacca
ggactggatgatggagatgaagatttacccgtggtagatctaactcaagaagagtctcgg
atcgattgtaaccttggcactgttaacggagatattgttggcttacaatattataaagga
acggttaatattggagaaatggtgaatctagaacgtgaacctcacaataaatatgacagg
aacgctatccgagtaataaacatggatggtcaacaggtcggccatattaaacgtgaacta
gctaaagctttagcgtttgtccttgataataaattggcgcgtgtggaagggattgtacca
cgtggatccaacaatacatacactatgccgataaatataacactatggggacaaactaca
gcaaataaccgaagtgaagctgtgtccgttttaaaatatcatggttattctgtaactaat
gctggactaagtagcaaagtaacaattggatctatgcctggaacatcaactggtggaatt
agtgtatctgattacagtcatattcaaacacgcagaacattcttatcacaaacagaagta
cggaatgagttggataaactgtttgatactcttgaagaaggtgataaaacaacaatgacg
gaaccggctgtggctataaaaactcctctctacccccatcaaaaacaagcattaaactgg
atgatatgtaaagaaaataatgaagccttgccaccattttgggaaaaaagaggaaatcgt
tatttcaacagtttaacggtatttacaagcaataaacaaccaagaacagttcacggaggt
atattagctgatgatatgggtttgggtaaaactctggaggttatatcgctgatattaacc
aacttctgtaaagggcagccattagctataccagtaccaggcagaaacagatattcacaa
aaacctcagaggcgaaagctcaaagctaagaaaatttcaaaacaaccattgtcacagaaa
aagggattcgaaaaaaaggctgcaaaaaattttggatcagattcagaagaagaggatcta
ttaaggaaacagattcgaaaaatgttagcaagtaaagcacctggtggttgtgttagttct
gactctgactgtgatgggaaagatacagtcatggatccagatataatatttatatctgat
gatagtccagaatgcaagccttcacaacagatgccatttacccttaaaccaaaacctgat
ctggttttaaacaaaccagtttcagttacatcagaacctatagtactgtttgatgatcca
gtaactgaagaaatagtttttccagagcaagtggcagatattcatccttcagttttatgt
aatcctaagccagagcctataaaaactgaaacagttccttgcaaatcaaaatcagtggat
atggaacctattacaattatagatgaaccagtttcacctgaaccgatctttattgtaaaa
aaatcaaaacctattaaaagcaaacagaaagcagtaaaacagaaagcggtttcagaacca
gttgagtctgtaagaagatctcgacgggctgtgaagcaaccagccaggtatgtggatgat
ggagatgatgatacggaaatggagaaaccagctaccaaacgatctaggaaagaagacatt
caaaatgtagaagattcagtgaaagataaatcaataaaagaaccaataataattgattta
tctacacccacaccagttaaaccccttccagaatcttctcagatagcttcactaccttta
aaaataccagggtttcagccaccacaattagccatctgctggtcagatgagtctaggaat
aagacaccaatatcaagtcttactgcttcaaccacacacaatgcaactgttcgttccaat
gcaacacagcaatcagagcctccagttaataaaggcaaaggaaagggcaagaaaaagggt
aaaggaaagggaaagaaattaaccaatcaggtcgaagatgatgctccacctctgcccagt
ctaccagcagaattcaatgatgaaaataatccacctgttaagagccaatcaatagatggt
agtaattttatttcatcagatgatagtgcttctagtgatgaagattggttacctgaatta
ggtagtcaagatttaccttataactgtgataaaaatggtagtgatgatgatatattacct
gatttagtcagtaaagagttaccttttaacattgataagtctgtgatgagtaagtgtgat
tctacaactggtaggataaaatcttgtggaccacgaacaacattaatagtctgtcctctt
tctgtcatgaataactgggtgagtcagcttgaagaacatttaagacgtgatgttcatcta
gagatttatacattttatggtataaatagaacaacagataataatttactggaatcacag
gatattgtaatatcaacgtacggaacagtcgcttccgattttaaaagtactgattcagtt
ttaaagaaagttcattggttgaggattatcctggatgaaggtcattacatacgaaatgcg
aaaactgtcatgtgtcaggccatattggaattaaaagctgaaagaagatgggtgttaaca
ggaacacctatacaaaattctatcaaagatttgttttcattggtcaactttctcaagatc
agtccattaactgatccgcaatggtggattagaacaatagaacgtccaatagctcttgga
gaagaaacagctataaaacgagttcaagctctgatggctaatatagctttacgacgaacc
aaaaaccaacaagttaacggtaaagctttagtagagttacctgcccgcgatgtatttacg
gaacatgtaactctatcagaagatgaaaggaaactttatagtgctatgcaaacagaggga
aaacttatcatcagcagatattttcaggaaggtacattattacatcattatagtcaagta
ttagccatattattacgattacgtcagttgtgtattcatcctatgttatgttctaaagct
gctcatggagttcaaagagctatggaaatgttaggtatgactaagaatggtccaacagta
gaagttgatgatgaaactaagaagaagttaatagatgcgttgatggatgtattaaattct
gggtctgatgaagaatgtcctatatgtttagagagtttaacgtctcctgttataacaccc
tgtgctcatgtatattgtagagcttgtattactaacgtcatcaatgtagggaacccgaat
gcagcttgtcctctatgtagaggtgaactaaaagaagataaattaatagaagtaccaaaa
gaacaagaccaaatacaagataatctgattattactgatgaaaattatcagtccagtagt
aaggtggatgctttattaaaatcattggttaaccttcgatctgaagatcctacagtgaag
agtattattgtctcccagttcacatctttattaaatctgatcgaaatacccctcaaactt
aatggttttaagtttgcgagattagatggtaccatgacgaataaaaaaagaatagaaaat
atagacatctttatggatccatcccctggctcaccgactatatttctactctctcttaaa
gctggtggtatcggtttaaatcttacagctgcttctcgcgtcttccttatggatcctgca
tggaaccctgcagctgaggaacaatgttttgacagatgtcacagattaggacagaaacga
gatgttatcattaccaagtttattgttcaagattccgtagaagaaaagatgttggaacta
caggatcgtaaacgagaattaatgcaaggggctttctctaaaaaacaatcagccaatgaa
agacgtgctaatcgtgtgcaagatatcagaaatcttcttgatatgtag

DBGET integrated database retrieval system