Patella vulgata (common limpet): 126814586
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Entry
126814586 CDS
T09576
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126814586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126814586
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126814586
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC8
TPR_14
TPR_1
RIOX1_C_WH
Motif
Other DBs
NCBI-GeneID:
126814586
NCBI-ProteinID:
XP_050395792
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All DBs
Position
3:45178043..45210344
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AA seq
704 aa
AA seq
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MNEPKYDENADMPSIPAITPSQSDLMKLATQEFDKKNFPAAFSLMGKLAAQRTTDPKVLH
NKVVAEFYQSGLKNKDDFNKNLQSVCKLIRYGPRRLSSETEALEDVDQTVIFYNQSVLLY
HHRQYKAALEVLEKVVPSLEPLVSLYPTEENLSRKCVLLLVELYLCTYQPEKAMGRIAYF
EKTYFIGKPATQMTADKPTSSGGGERSDSSVDALRYKIGLYKTRCLLMFKSLKSSKRELK
ALLAIHPNQQPLSVTYLKCYLDFLRGNYKKAMKGLSGLPQTQVISEHGECLTMMYYNNLA
CIHFQMKKHHLGALHLRKSLQENENAIKDPRYTEKDRPLNMMGMSRHYELLYNMGIQLLH
CGKSQPAFDCLIQAVQVYQTNPRLWLRLAECCIQYNRENNDEDRKLEKRLEVIQGSVGNG
IHRKLILGPGLKKEKQSSGSSAIPAPTYEFASLCLRNALFLLPEDPLDFDTAPSPDNVDA
SKSQQDMLMVPAPPGNPMRSVEVANLRCSILCAAAYVSLSLNDHLMALNYAKNLLRQPRI
SGAQRYLGNLYMAEVLVILDRISDAVNHLKPEDLEVINPCPPEEKTDKSEKEKDEPTEEK
GPLYPWSPKEMIHAKKIMQYNLAVTYAIRGDFDKSNANLSESVAAIGTPLPAQMFFLKLY
LDLMEGRRITAQNVIKDHFGHMTPNRVENQVLSKSSTNAWHDNS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaccaaagtatgatgagaatgcagatatgccttctatcccagcaattactcca
tcacagagtgatttgatgaaactggccactcaagaatttgacaagaaaaattttcctgca
gcatttagccttatgggaaagcttgctgctcaaagaacaactgatccaaaggttcttcat
aataaagttgtagcagaattttaccaaagtggattgaagaataaagatgattttaataaa
aaccttcagagtgtgtgtaaacttatacgatacgggccccgacgactatcaagtgaaacc
gaggcgttagaagatgttgatcaaacagttatattttataatcagtctgttctattgtat
catcacagacaatataaagcagcattagaagttttggaaaaggtggttccatcattggaa
ccattagtctctctttatcctacagaagaaaatctatcaaggaaatgtgttttactgttg
gtagaactttatttatgtacctaccagccagagaaggcaatgggtagaatagcatatttt
gaaaagacatattttattggtaaacctgctacacaaatgacagctgataaaccaacaagt
agtggtggtggtgaaaggtctgacagtagtgtggatgctttaagatacaagataggattg
tataaaactagatgtttattaatgtttaagtctttaaaatccagtaaaagagaattaaaa
gctttacttgctattcatcctaatcaacaacctttatcagtaacatatctaaaatgttat
ttagattttttacggggtaattataagaaagctatgaaaggtttgtctggtttaccacag
acgcaggttattagtgaacatggtgaatgtttaactatgatgtactataataatctagct
tgtatacattttcaaatgaaaaaacatcatcttggagctctccatttgcgcaaatcttta
caagaaaatgagaatgccatcaaagatccaagatatacagagaaagatcgtccattaaat
atgatgggtatgagtcgacattatgagttattatataatatgggtatacagttattacat
tgtggtaaatcacagccagcctttgattgtttaatacaagctgtacaagtatatcagact
aatcctagattgtggttacgtcttgctgaatgctgtatacaatataacagagagaataat
gatgaagatcgtaagctagagaaaagattagaagtaattcaaggttcagtaggcaatgga
attcatcgtaaacttattttaggtcccggtttaaagaaggaaaaacaaagttctggtagt
tctgctattccagcaccgacttatgaatttgcttctttgtgtttacgtaatgctctgttc
ttattaccagaagatcctttagattttgatacagcaccatccccagataatgttgatgct
agtaaaagtcaacaggacatgttaatggttccagcaccaccaggaaatcctatgagatca
gtagaagttgccaatctcagatgtagtatattatgtgccgcagcttatgtctccttgtct
ttaaatgatcatctcatggctttaaattatgcgaagaatttgctacgtcaacctagaata
tctggtgctcaaagatacttaggaaacctatatatggcagaagtattagttatattagat
cgtatttctgatgctgtcaatcatttaaaaccagaagatttagaagttataaatccttgt
ccaccagaagaaaagaccgataaaagtgaaaaagagaaagatgaacctacagaagaaaaa
ggtcctctgtacccatggagtcccaaggaaatgatccatgcaaaaaagataatgcagtat
aacttagcagtgacatatgctattcgaggagactttgacaaatcaaatgcaaatttatct
gagagtgttgcagccattggtaccccattaccagcacaaatgttcttcttaaaactgtat
ttagatctaatggaaggcagaagaataactgcacaaaatgttatcaaagatcattttggt
catatgacacccaaccgggtagagaaccaagttctttcaaaatccagtacaaatgcttgg
cacgacaattcatag
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