KEGG   Patella vulgata (common limpet): 126814625
Entry
126814625         CDS       T09576                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pvul  Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvul03041]
    126814625
Spliceosome [BR:pvul03041]
 Complex B
  Other components
   Complex B specific factors
    126814625
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_ACSF4 NBCH_WD40 Beta-prop_RIG_2nd Ge1_WD40 LisH_TPL Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_NWD2_C Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_BBS7 LisH_WDR26 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd VPS8_N Beta-prop_DCAF12 LisH_2 PD40 TFIIIC_delta WD_LRWD1 DUF7899 TolB_like PROPPIN DUF7165 LisH_PAC1 WDR54
Other DBs
NCBI-GeneID: 126814625
NCBI-ProteinID: XP_050395861
LinkDB
Position
3:57071008..57104244
AA seq 513 aa
MAVEIESADVVRLIEQYLKENNLLKTLSILQEESGISLNTVDSVDGFISDINSGHWDTVL
QAIQTLKLPDNKLIDLYEQIVLELIELRELGAARSLLRQTDPMLMMKHNQPDRYLHLENM
LARSYFDPREAYPEGQTKEKRRTAISQALAGEVNVVPPSRMLALLGQALKWQQHQGLLPP
GTTIDVFRGKAAVKEQDEEKYPTQLSKTIKFGQKAHIECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLRYQAQDNFMMMDDAVLCMSFSRDSEMLATGAQDGKIKVWKILTGQCLR
KFERAHSKGITSLYFAKDNSQLLSASFDQTIRMNGLKSGKTLKEFRGHTSFVNDAVFTPD
GHLVISASSDGTIKIWNIKTTECQSTFKSLGGTSSTDITVHSIHPLVRNAEQFVVCNRSN
TVVLMNIQGQIVRSFSSGKREGGDFVCATVSPRGEWIYCTGEDMVLYCFSISTGKLERTL
TVHEKDVIGISHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggctgtcgaaatagagtctgccgatgttgtgaggttaattgaacagtatttaaaagaa
aacaacctgttgaaaacattatcaatattacaagaagagagtggtatttccttgaatact
gttgactctgtagatggctttatctctgatattaacagtggacattgggatacagtacta
caagctatacaaactcttaaattacctgacaataaacttatagatctttatgaacagatt
gttttagaattaatagagttacgtgaattgggagcggctagatctttattaagacagacg
gatcctatgctgatgatgaaacataatcaacctgacagatatcttcatttagaaaacatg
ttagctagatcatattttgatcctagagaggcttatcctgaaggtcaaacaaaagaaaag
cgacgtactgctatatctcaagccttagctggtgaagtaaatgttgtaccaccttctcgt
atgttggctttgttaggtcaagctttaaaatggcaacaacatcaaggtttattaccacct
ggtacaacaattgatgtatttcgtggtaaagctgctgttaaagaacaagatgaagagaaa
tatcctacacaactgagtaaaacaattaagtttggtcagaaagctcatattgaatgtgct
agattttctccagatggtcagtacctagtaacaggctctgttgatggttttatagaggtt
tggaattttacaacagggaaaataagaaaagatttacgatatcaagcacaggataatttt
atgatgatggatgatgctgtgttatgtatgagctttagtagagattcagaaatgttagcc
actggtgctcaagatggaaaaataaaggtttggaaaattctcactggacaatgtttgcgt
aaatttgaaagagctcacagtaaaggtattacatctctatattttgctaaagacaacagt
cagttactcagtgcctcttttgatcaaacaatacgaatgaatggtttaaaatcaggaaag
acactaaaagaattccgaggtcatacatcgtttgttaatgatgcagtttttactccagat
ggacatcttgttataagtgctagttcagatggtactataaagatctggaatataaaaaca
acagaatgtcagagtacgtttaaatcattaggtggaacatctagtacagatataactgta
catagtatacatccattagttagaaatgctgaacagtttgtagtatgtaatagatctaat
acagttgtcttaatgaacatacaggggcagattgttaggagtttttctagtggtaagcgt
gaaggaggggattttgtatgtgcaacagtatcgccaagaggtgaatggatctattgcaca
ggagaagatatggtgttatattgttttagtatatcaacaggaaaattagaaagaacatta
actgttcatgaaaaagatgtaataggtatatctcatcatccacatcaaaatttaatagct
acatattctgaagatggattgttaaaactgtggaaaccctga

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