Patella vulgata (common limpet): 126815231
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Entry
126815231 CDS
T09576
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pvul
Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvul03041
]
126815231
03016 Transfer RNA biogenesis [BR:
pvul03016
]
126815231
Enzymes [BR:
pvul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126815231
Spliceosome [BR:
pvul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126815231
Transfer RNA biogenesis [BR:
pvul03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
126815231
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SPRY
ResIII
CMS1
PFK
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
126815231
NCBI-ProteinID:
XP_050396746
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All DBs
Position
3:complement(41879652..41945003)
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AA seq
428 aa
AA seq
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MTAFEEMGVMPEIGKAVEEMDWSLPTDVQNEAIPMILGGGDVLMAAETGSGKTGAFCLPI
LQIVHETIRDLREGKGLQNQSSRLKGSGGSAKSQKWKMNSYDRGNAMAIDPEGLLCQARD
AAGWHGTRSNRAVVGGGKYYYEGTITDEGLCRLGWSTDKGTLDLGTDRFGYGFGGTGKKS
SAKQFDSYGEPFGINDTIGNYLDMEKGEIRWSKNGVDLGKAYDIPRQMLNEKFFAAVVLK
NAEILFNFGDKPFKFPPKGEFIGLSQTPKENFVESTIIAKGAVSAKPAPNAPQAIIIEPS
RELAEQTFNQLQKFKKYVNNPQVNELLIIGGESAKDQVNALENGVDIVVGTPGRMEDLIS
TGKLALHQIRFFVLDECDGLLQQGYGNLITRLHDQIPKVTSDGKRLQMIVCSATLHSFDV
KKMAVCGK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgactgctttcgaagagatgggtgtcatgccagaaattggcaaggctgttgaagagatg
gattggagcttgcctacagatgtacagaatgaagcaataccaatgatattaggaggagga
gatgttttgatggcagctgaaaccggaagtggtaaaactggggcattttgtttaccaata
ttacaaatagtacatgaaactattagagatctacgagagggaaaaggtcttcagaatcaa
agtagtcgtcttaagggatctggcggctcagcaaagagccaaaaatggaaaatgaattca
tatgacagaggaaatgccatggctatagatccagagggtctattatgtcaggcgagagat
gcagcaggttggcatggtactagatctaacagggctgttgttggtggaggtaaatattat
tatgaaggaactataactgatgaaggattatgtcgattaggctggtcaactgataaagga
actcttgatttaggaacggatagatttggttatggttttggtggaaccggaaagaaatct
tctgcaaaacaatttgattcatatggagaaccatttggaattaatgacacaattggtaat
tacttagatatggaaaaaggagaaatcagatggtctaaaaatggtgtagatctaggtaaa
gcttatgatatacctcgtcagatgttgaatgaaaaattcttcgcagctgtagtattaaag
aatgctgagattctcttcaactttggagacaagccatttaagtttccaccaaagggagaa
ttcattggattaagtcaaacaccaaaagagaattttgtagaatctacaataattgcaaaa
ggtgctgtaagtgctaaacctgctccaaatgctcctcaggcgataattattgagccatca
agagaattggctgaacagactttcaatcaactacagaagtttaaaaagtatgtcaacaat
cctcaggtgaatgaattgctgattataggtggagaaagtgcaaaagatcaagtgaatgca
ttagagaacggggttgatattgttgttggaacaccaggtagaatggaagatctgatatca
actggtaaattggctctacatcagatcagattttttgttttagatgaatgtgatggttta
ttacaacaaggctatggtaatcttataacacgattacatgaccaaatacctaaagttacc
agtgatggtaaacgtttacagatgattgtctgttcagctactcttcattcttttgacgtt
aaaaaaatggcggtatgtgggaagtga
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