KEGG   Patella vulgata (common limpet): 126815849
Entry
126815849         CDS       T09576                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul03020  RNA polymerase
pvul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126815849
  09124 Replication and repair
   03420 Nucleotide excision repair
    126815849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvul03021]
    126815849
   03400 DNA repair and recombination proteins [BR:pvul03400]
    126815849
Enzymes [BR:pvul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     126815849
Transcription machinery [BR:pvul03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     126815849
DNA repair and recombination proteins [BR:pvul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      126815849
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 DUF5817
Other DBs
NCBI-GeneID: 126815849
NCBI-ProteinID: XP_050397793
LinkDB
Position
3:16695816..16716606
AA seq 1175 aa
MYGEDEEMFEAEEENDEITTDMWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPTIDLQAESQHTSGVIETPPRYELKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLT
YSAPLYVDISKTFQKEGEDKIQTLHQKTYIGKIPIMLRSTYCLLSGLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMAANTVYVFQQKDSKYAFKTELRSCLEHSSRPTSTMWVNL
MARGGGGAKRSAIGQRIIAILPYIKQEIPIIIVFRALGFVSDRDILEHIIYDFDDPEMME
LVKPSLDEAFVIQEQNVACNFIGSRGARPGVTKEKRIRYAKEILQKEMLPHVGVSEFCET
KKAYFLGYMVHRLLLAALGRREVDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRMYA
QKFIDRGKDFNMELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRLNSPIGRDGKLARPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEVAPSAIQDASKIFVNGCWVGIHRDPDQLMSTLRKLRREMDIIVS
EVCMIRDFHEREIRIYTDAGRICRPLLIVENQKLLLKKSHVEQLKLREYNNYSWQDLVAS
GVVEYIDPLEEETTMLAMTPDDLCEKEAQYCSTYTHCEIHPSMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGFYITNYHVRMDTLAHGLFYPQKPLVTTRSMEYLRFRELPAGINSI
VAIACYSGYNQEDSVILNSSAIDRGYFRSFFFRSYKDSESKKGLDQEEIFEKPNRETVQG
MRAAIYDKLDEDGIIAPGTRVSGDDVLIGKTITLPASDDELDGTYMKFSKRDCSVFMRRS
ETGIIDQVMVTINNDGYKFCKIRVRTVKKPQIGDKFASRHGQKGTCGITYRQEDMPFTCE
GISPDIIINPHAIPSRMTIGHLIECLQGKVAANKGEIGDATPFNDTVNVQKISNLLQQYG
YQQRGNEVIYNGFTGRKQNAQVFLGPTYYQRLKHMVDDKIHSRARGPLQILNRQPMEGRS
RDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYRVHVCNFCGLIAIANLRNQTFECRG
CKNKTHISQIRIPYACKLLFQELMSMNIAPRMMTT
NT seq 3528 nt   +upstreamnt  +downstreamnt
atgtatggggaagatgaagaaatgtttgaggcggaggaggagaatgatgagatcacgact
gacatgtggcaggaggcgtgttggattgtcatcagttcttattttgacgaaaagggcctg
gtacgacagcagcttgattcttttgatgagtttatccagatgtccgttcagagaattgtg
gaggactcgccaactattgaccttcaagcagaatcccaacatacatctggtgtcatagaa
acaccgcctcgttatgagttaaagtttgaacagatttatctgtcaaagccgacacattgg
gaaaaagatggtgcaccaagtcccatgatgcccaatgaagcgcgactgagaaatttaacg
tattcagcgccactttatgtagacatttcaaaaaccttccaaaaagaaggtgaagacaaa
atacagacactgcatcagaagacgtacatcggtaaaatacctataatgttacgatcgaca
tattgtttactgagtggactcacagatcgtgatttgacagagttaaatgaatgtccttta
gatccgggcggatatttcattatcaatggatcagaaaaagttttgattgcccaagaaaaa
atggctgccaacacagtttatgtatttcaacagaaggattctaaatatgcatttaaaact
gagttacgttcatgtttagaacattcgtccagacctacaagtacgatgtgggttaattta
atggctagaggtggaggtggagcaaaaagaagtgctataggtcagagaattattgccatc
ttgccgtatattaaacaagaaatacctataattattgtattccgtgctctcggatttgta
tcagatagagatatcctagaacatattatttacgactttgatgatccagaaatgatggag
ttggtaaaaccatcattagatgaagcctttgtcatccaggaacaaaatgtagcttgtaat
tttattggatcaagaggagcacgtcctggtgtaaccaaagaaaagagaattcgctacgca
aaggaaattctacaaaaagaaatgttgcctcatgttggagtttcagaattttgtgaaaca
aaaaaggcctatttcttaggatatatggtacatcgtctgttattggctgctttaggacga
cgagaagttgatgatcgagatcactatggtaataaaagattggatttagccggaccatta
ctggctttccttttccgagggttgttccgaaacttgatgaaggaagtgagaatgtacgcc
cagaagtttattgatcgtggtaaagattttaacatggagttggccattaaaactagaatt
ataacagatggtttgaaatattccctggctacaggtaactggggtgaccagaaaaaagct
catcaagctcgagcaggtgtctcacaggtattgaatagactaacatttgcatcaaccttg
tcacatcttcgtcgtttgaattctccaattggtcgggatggtaaattagcgagaccccgt
cagttacacaacacactatggggtatgatctgtcctgccgaaacaccagagggagctgct
gtcggcctggtgaagaatttggcgttaatggcttatatttctgttggttcgcaaccatca
ccaattctagaatttttggaagaatggagtatggagaatttagaggaagtggcaccttct
gctattcaagatgcttctaagatatttgtaaatggatgttgggtaggaatacatcgggat
cctgatcagctgatgagtacacttagaaaattacgacgtgaaatggatatcattgtatct
gaggtgtgtatgattcgagatttccatgaaagagaaattcgtatttatacagatgctggt
cgtatttgtcgtccattgttgattgtagagaatcagaaattattattaaagaaaagtcac
gttgaacagttgaaattacgagagtataacaactacagttggcaggatttagtggctagc
ggtgttgtggagtacattgatccgttagaagaggagacaaccatgttagctatgacccct
gatgacctatgtgagaaagaggcacaatattgttccacgtatacacattgtgaaattcat
ccgtcaatgatcctgggtgtatgtgcctccattattccatttcctgatcacaatcagtct
cctcgtaatacatatcaatccgctatgggtaaacaggctatgggtttttatattacaaat
taccatgtgcgtatggatacgcttgctcatggcttattttacccccagaaaccactagta
acaacacgatctatggaatatttacgattcagagaacttcccgcaggtattaattctatt
gttgctatcgcctgttattctggttataatcaggaagattccgttattttaaacagttcg
gccattgatagaggttatttcagatcgtttttcttccgatcttacaaagattctgaatct
aaaaaaggattggatcaagaagaaatttttgagaaacctaacagagaaaccgttcaaggt
atgagagctgctatttatgataaattagatgaagatggtattatagcaccaggtacaaga
gtatctggagatgatgttttaattggtaaaactataactctacctgccagtgatgatgag
ttggatggtacatatatgaagtttagtaaaagagattgttctgttttcatgagaagaagt
gaaactggtattattgatcaggttatggtcactataaacaacgatgggtataaattttgt
aaaattcgagttcgaactgtgaagaaacctcagattggtgataagtttgctagtcgacac
ggacagaagggaacgtgtggtataacatacagacaagaggacatgccgttcacatgtgaa
ggaatatctcccgatattatcatcaatccccacgctattcccagtagaatgacaattggc
catttaattgagtgcttacaaggcaaagtagctgcaaataaaggagagattggtgatgcc
acgccttttaatgatactgttaatgtacagaaaatttctaatttactccaacaatatggt
taccaacagagaggaaatgaggttatatataatggttttactggtagaaaacagaatgcc
caggttttcctcggaccaacatattaccaacgtttgaaacatatggtggatgataaaata
cattctcgtgcacgaggtcctttacagatcctaaacagacaacctatggagggtagatct
cgtgatggtgggcttcgttttggtgagatggagagagattgtcagattgctcatggagct
gcccagtttttacgagaaagattatttgaggcatcagatccctatcgagtccatgtgtgt
aatttctgtggtcttattgcgattgctaatcttcgtaatcagacttttgaatgtagaggc
tgcaagaataaaactcacatttcccaaatccgtataccatatgcttgtaaattattgttt
caagagttgatgtcgatgaacattgcaccaagaatgatgacaacataa

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