Entry |
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Name |
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
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KO |
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Organism |
pvul Patella vulgata (common limpet)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pvul00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126815849
09124 Replication and repair
03420 Nucleotide excision repair
126815849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pvul03021]
126815849
03400 DNA repair and recombination proteins [BR:pvul03400]
126815849
Enzymes [BR:pvul01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126815849
Transcription machinery [BR:pvul03021]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126815849
DNA repair and recombination proteins [BR:pvul03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126815849
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
3:16695816..16716606
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AA seq |
1175 aa
MYGEDEEMFEAEEENDEITTDMWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPTIDLQAESQHTSGVIETPPRYELKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLT
YSAPLYVDISKTFQKEGEDKIQTLHQKTYIGKIPIMLRSTYCLLSGLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMAANTVYVFQQKDSKYAFKTELRSCLEHSSRPTSTMWVNL
MARGGGGAKRSAIGQRIIAILPYIKQEIPIIIVFRALGFVSDRDILEHIIYDFDDPEMME
LVKPSLDEAFVIQEQNVACNFIGSRGARPGVTKEKRIRYAKEILQKEMLPHVGVSEFCET
KKAYFLGYMVHRLLLAALGRREVDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRMYA
QKFIDRGKDFNMELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRLNSPIGRDGKLARPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEVAPSAIQDASKIFVNGCWVGIHRDPDQLMSTLRKLRREMDIIVS
EVCMIRDFHEREIRIYTDAGRICRPLLIVENQKLLLKKSHVEQLKLREYNNYSWQDLVAS
GVVEYIDPLEEETTMLAMTPDDLCEKEAQYCSTYTHCEIHPSMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGFYITNYHVRMDTLAHGLFYPQKPLVTTRSMEYLRFRELPAGINSI
VAIACYSGYNQEDSVILNSSAIDRGYFRSFFFRSYKDSESKKGLDQEEIFEKPNRETVQG
MRAAIYDKLDEDGIIAPGTRVSGDDVLIGKTITLPASDDELDGTYMKFSKRDCSVFMRRS
ETGIIDQVMVTINNDGYKFCKIRVRTVKKPQIGDKFASRHGQKGTCGITYRQEDMPFTCE
GISPDIIINPHAIPSRMTIGHLIECLQGKVAANKGEIGDATPFNDTVNVQKISNLLQQYG
YQQRGNEVIYNGFTGRKQNAQVFLGPTYYQRLKHMVDDKIHSRARGPLQILNRQPMEGRS
RDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYRVHVCNFCGLIAIANLRNQTFECRG
CKNKTHISQIRIPYACKLLFQELMSMNIAPRMMTT |
NT seq |
3528 nt +upstreamnt +downstreamnt
atgtatggggaagatgaagaaatgtttgaggcggaggaggagaatgatgagatcacgact
gacatgtggcaggaggcgtgttggattgtcatcagttcttattttgacgaaaagggcctg
gtacgacagcagcttgattcttttgatgagtttatccagatgtccgttcagagaattgtg
gaggactcgccaactattgaccttcaagcagaatcccaacatacatctggtgtcatagaa
acaccgcctcgttatgagttaaagtttgaacagatttatctgtcaaagccgacacattgg
gaaaaagatggtgcaccaagtcccatgatgcccaatgaagcgcgactgagaaatttaacg
tattcagcgccactttatgtagacatttcaaaaaccttccaaaaagaaggtgaagacaaa
atacagacactgcatcagaagacgtacatcggtaaaatacctataatgttacgatcgaca
tattgtttactgagtggactcacagatcgtgatttgacagagttaaatgaatgtccttta
gatccgggcggatatttcattatcaatggatcagaaaaagttttgattgcccaagaaaaa
atggctgccaacacagtttatgtatttcaacagaaggattctaaatatgcatttaaaact
gagttacgttcatgtttagaacattcgtccagacctacaagtacgatgtgggttaattta
atggctagaggtggaggtggagcaaaaagaagtgctataggtcagagaattattgccatc
ttgccgtatattaaacaagaaatacctataattattgtattccgtgctctcggatttgta
tcagatagagatatcctagaacatattatttacgactttgatgatccagaaatgatggag
ttggtaaaaccatcattagatgaagcctttgtcatccaggaacaaaatgtagcttgtaat
tttattggatcaagaggagcacgtcctggtgtaaccaaagaaaagagaattcgctacgca
aaggaaattctacaaaaagaaatgttgcctcatgttggagtttcagaattttgtgaaaca
aaaaaggcctatttcttaggatatatggtacatcgtctgttattggctgctttaggacga
cgagaagttgatgatcgagatcactatggtaataaaagattggatttagccggaccatta
ctggctttccttttccgagggttgttccgaaacttgatgaaggaagtgagaatgtacgcc
cagaagtttattgatcgtggtaaagattttaacatggagttggccattaaaactagaatt
ataacagatggtttgaaatattccctggctacaggtaactggggtgaccagaaaaaagct
catcaagctcgagcaggtgtctcacaggtattgaatagactaacatttgcatcaaccttg
tcacatcttcgtcgtttgaattctccaattggtcgggatggtaaattagcgagaccccgt
cagttacacaacacactatggggtatgatctgtcctgccgaaacaccagagggagctgct
gtcggcctggtgaagaatttggcgttaatggcttatatttctgttggttcgcaaccatca
ccaattctagaatttttggaagaatggagtatggagaatttagaggaagtggcaccttct
gctattcaagatgcttctaagatatttgtaaatggatgttgggtaggaatacatcgggat
cctgatcagctgatgagtacacttagaaaattacgacgtgaaatggatatcattgtatct
gaggtgtgtatgattcgagatttccatgaaagagaaattcgtatttatacagatgctggt
cgtatttgtcgtccattgttgattgtagagaatcagaaattattattaaagaaaagtcac
gttgaacagttgaaattacgagagtataacaactacagttggcaggatttagtggctagc
ggtgttgtggagtacattgatccgttagaagaggagacaaccatgttagctatgacccct
gatgacctatgtgagaaagaggcacaatattgttccacgtatacacattgtgaaattcat
ccgtcaatgatcctgggtgtatgtgcctccattattccatttcctgatcacaatcagtct
cctcgtaatacatatcaatccgctatgggtaaacaggctatgggtttttatattacaaat
taccatgtgcgtatggatacgcttgctcatggcttattttacccccagaaaccactagta
acaacacgatctatggaatatttacgattcagagaacttcccgcaggtattaattctatt
gttgctatcgcctgttattctggttataatcaggaagattccgttattttaaacagttcg
gccattgatagaggttatttcagatcgtttttcttccgatcttacaaagattctgaatct
aaaaaaggattggatcaagaagaaatttttgagaaacctaacagagaaaccgttcaaggt
atgagagctgctatttatgataaattagatgaagatggtattatagcaccaggtacaaga
gtatctggagatgatgttttaattggtaaaactataactctacctgccagtgatgatgag
ttggatggtacatatatgaagtttagtaaaagagattgttctgttttcatgagaagaagt
gaaactggtattattgatcaggttatggtcactataaacaacgatgggtataaattttgt
aaaattcgagttcgaactgtgaagaaacctcagattggtgataagtttgctagtcgacac
ggacagaagggaacgtgtggtataacatacagacaagaggacatgccgttcacatgtgaa
ggaatatctcccgatattatcatcaatccccacgctattcccagtagaatgacaattggc
catttaattgagtgcttacaaggcaaagtagctgcaaataaaggagagattggtgatgcc
acgccttttaatgatactgttaatgtacagaaaatttctaatttactccaacaatatggt
taccaacagagaggaaatgaggttatatataatggttttactggtagaaaacagaatgcc
caggttttcctcggaccaacatattaccaacgtttgaaacatatggtggatgataaaata
cattctcgtgcacgaggtcctttacagatcctaaacagacaacctatggagggtagatct
cgtgatggtgggcttcgttttggtgagatggagagagattgtcagattgctcatggagct
gcccagtttttacgagaaagattatttgaggcatcagatccctatcgagtccatgtgtgt
aatttctgtggtcttattgcgattgctaatcttcgtaatcagacttttgaatgtagaggc
tgcaagaataaaactcacatttcccaaatccgtataccatatgcttgtaaattattgttt
caagagttgatgtcgatgaacattgcaccaagaatgatgacaacataa |