KEGG   Patella vulgata (common limpet): 126816333
Entry
126816333         CDS       T09576                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul03013  Nucleocytoplasmic transport
pvul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126816333
  09122 Translation
   03013 Nucleocytoplasmic transport
    126816333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvul03019]
    126816333
   03041 Spliceosome [BR:pvul03041]
    126816333
Messenger RNA biogenesis [BR:pvul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     126816333
Spliceosome [BR:pvul03041]
 Complex C
  Other components
   EJC/TREX
    126816333
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    126816333
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_1st ANAPC4_WD40 WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_Aladin Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Tricorn_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N WD40_RFWD3 RMC1_N Beta-prop_WDR75_1st Beta-prop_HPS5 NBCH_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_ELP1_1st Beta-prop_DCAF12 PD40 B-prop_COPA_B_2nd Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Peptidase_S9_N WD_LRWD1 Beta-prop_WDR41 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 126816333
NCBI-ProteinID: XP_050398724
LinkDB
Position
3:23707399..23712138
AA seq 318 aa
MATYMESMQKHFQNNNRVRDTQSHLAKVHSVAWSCDGRRLASGSFDKTVCVYTLERDRLS
KENTFRGHGDSVDQLCWHPKHPDHLVTASGDKTIRIWDTRSSRSVASVNTKGENINICWS
PDGSTIAVGNKEDLVTFIDARTHRSRTDEQFKYEVNEISWNNDGDLFFLTSGQGTINILS
YPALKPLHSLTAHPANCICIEFDPVGTYFATGSADALVSLWDLSELVCVRTFSRLDWPVR
TLSFSYDGQLLASASEDLVIDIAMVETGEKVTEIPCDTPTFTVAWHPKRHLLAYACDDKH
DRDRDSGTVKVFGFPTDP
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcgacttacatggagagcatgcaaaaacattttcaaaataacaaccgtgttagggat
acacagtcacatttagcaaaagttcactcagtggcatggagctgtgatggtagaagactg
gcttccgggtcctttgacaagactgtgtgtgtttataccctggaaagagatagattaagc
aaagaaaatacctttcgtggtcatggtgatagtgtagatcagttatgctggcatcctaaa
catcctgatcatcttgtgacagcgagtggtgacaaaacaatacgaatctgggatacaaga
tctagtagatctgtagctagtgttaatacaaaaggtgaaaatataaatatatgttggtca
ccagatggtagcactatagctgttgggaataaagaggacttggtgacctttattgatgcc
agaacacaccggtcacgaacagatgaacaatttaaatatgaagtaaatgaaatttcctgg
aataatgatggtgatctctttttcctaacaagtggtcaaggaacaataaatatacttagt
tatccagcattaaagccattgcacagtttaacagctcaccctgctaattgtatatgtatt
gagtttgatcctgtaggaacatattttgctactggtagtgctgatgccttagtgtcattg
tgggatttgtctgaattagtttgtgtaagaactttctcaaggttagattggccggtgaga
actttaagttttagttatgatggtcagttattagcttcagcatcagaagatcttgttata
gatatagctatggtagaaacaggagaaaaagtgacagaaattccgtgtgatactcccact
tttacggtagcctggcacccaaaacgtcatttactggcatacgcgtgtgatgataaacat
gacagagatcgagattcaggaacagtgaaagtgtttggattcccaacagatccataa

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