Patella vulgata (common limpet): 126816357
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Entry
126816357 CDS
T09576
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03018
RNA degradation
pvul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126816357
09123 Folding, sorting and degradation
03018 RNA degradation
126816357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126816357
03041 Spliceosome [BR:
pvul03041
]
126816357
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126816357
mRNA degradation factors
5'-3' decay
Lsm complex
126816357
Spliceosome [BR:
pvul03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126816357
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
126816357
NCBI-ProteinID:
XP_050398757
LinkDB
All DBs
Position
3:46471965..46475689
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AA seq
112 aa
AA seq
DB search
MAQQGNKSFGDGDKEKKKKESILDLSKYLDKPIRVKFSGGREATGVLKGFDPLLNLVLDG
TTEFLRDPDDPFKLTEDTRQLGLVVCRGTSVVLICPADGMEAIPNPFVQQDG
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaaggaaataagtcatttggtgatggtgataaagagaagaagaaaaaagaa
agtattttagatttatctaaatatcttgacaaacctatcagagttaaatttagtggtgga
agagaagccactggtgttttgaaaggatttgatcctctgttaaatcttgtattggatgga
acaacagaatttctaagagatcctgatgatccctttaaattaacagaggacactagacag
ttaggattagtggtttgtagaggtacatcagttgttttaatatgtcctgctgatggtatg
gaagctatacctaatccttttgttcaacaagatggatga
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