Patella vulgata (common limpet): 126816826
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Entry
126816826 CDS
T09576
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pvul
Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvul03016
]
126816826
Enzymes [BR:
pvul01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
126816826
Transfer RNA biogenesis [BR:
pvul03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
126816826
Prokaryotic type
126816826
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
126816826
NCBI-ProteinID:
XP_055956009
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All DBs
Position
3:64177094..64189915
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AA seq
504 aa
AA seq
DB search
MLRRSVQFFKQLTKLFKMSETLTPTATDKLVEETALKRPLNLGEEEITNSQEVKKVKLDE
EAPPPMLGRPDRPRKVALLLAYCGAGYYGIQIQKDYPTIESELLSSLVKGNFITQEHADS
PQKIQFQRAARTDKGVSALGNVISLKIPVDSESVVDKINENLPEQIRVIGYIRATRGFNS
KNFCDSRTYMYMIPTYAFAGVEKMVSDEYRIDDESLQTLQSVLNKFKGTHNFHNFTSGIK
PTESCAKRYIISFEAGKPVVEDGTEFITLVVKGQSFMLHHIRKMVALTVSILRGMCGIET
VDKAWLHDKMDVPKAPSEGLFLYQTHYDGYNKRYGADGIHDPIDWSNYKVELDEFQKKYI
TSHIVKSEKTDRIVLNWLKVLHLHKFDMREDQEHKRTTKQMYDIIKAASASCKSDNSSNN
TNQTTDVETTTPVSSKDCSKQTETVENIVSSSSLDMENINPTKDTQITAADSSHDNTNVE
IVNNNSLIDASVTMTTLKTEESKS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaagatctgttcagttttttaaacagttaacaaaattattcaagatgtctgaa
actctaactccaacagcaacagacaagcttgtagaggagactgctctgaagaggcctttg
aacttgggtgaagaagaaattacaaatagccaagaagtaaagaaagtaaaactagacgaa
gaggctccaccccctatgctgggtagaccagaccgaccaagaaaagtagcattattatta
gcttattgtggtgctggttactacggtatacaaatacagaaagattatccaacaattgaa
tctgagttgttgagctctctggtgaaaggtaattttataacacaagaacatgcagattca
ccgcaaaaaattcagtttcaaagagcagcaagaacagataagggtgtgtcagctcttggt
aatgtgatatcattaaagataccagtcgattctgaaagtgtagtggacaaaataaacgag
aatttacctgaacagattagagttataggttatatccgagctactcgaggttttaacagt
aaaaatttctgcgattccagaacttacatgtatatgatacccacctatgcttttgctggt
gtagagaaaatggtgtcagatgaatatagaatagatgatgaatctttgcagacattacaa
tctgttttaaacaagtttaaaggaacacataactttcataattttacatcaggaataaaa
cccaccgagtcttgtgccaaaagatatataataagttttgaggcaggtaaaccagtagtt
gaagatggtacagaatttattacattagttgttaaagggcaaagttttatgttacatcat
ataaggaaaatggttgctttaactgtatctatattaagaggtatgtgtggtatagagaca
gtagataaagcatggttacatgataagatggatgttcctaaagctccaagtgaaggactc
tttttatatcagacacattatgatggttataataaaagatatggtgctgatggaatacat
gatcctatagattggtcaaattataaagttgaattagatgaatttcagaagaaatatata
acatcacatattgttaaatcagagaaaacagatagaatagtattaaattggttaaaggtt
ctacatttacataagtttgatatgagagaagatcaagaacataaaagaacaactaaacaa
atgtatgatataatcaaggcagcatcagcttcatgtaaatcagataattcatcaaacaat
acgaaccaaacaacagatgtggaaacaacaactccagtttcttctaaagattgctctaaa
caaactgaaactgtagagaatattgtatccagtagttctttagacatggaaaatataaac
ccaacaaaagatacacaaattactgcagcagattcatctcatgacaatactaatgtagaa
atagtaaacaataatagtttgatagatgcatcagtaactatgacaacactaaaaacagaa
gaatcaaaatcctga
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