Patella vulgata (common limpet): 126817473
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Entry
126817473 CDS
T09576
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126817473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pvul04091
]
126817473
Lectins [BR:
pvul04091
]
C-Type lectins
Lecticans
126817473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Big_9
Calx-beta
Big_15
Motif
Other DBs
NCBI-GeneID:
126817473
NCBI-ProteinID:
XP_050400427
LinkDB
All DBs
Position
4:69070395..69127786
Genome browser
AA seq
2122 aa
AA seq
DB search
MASRNIIRVFLLIFVPVYGSLLLDKRDITVNVGRSVFLERPDLVFVKGGRDEECRVEVVN
TDPMTQRVGKLEPTIFDCHFSAKTIKYIHNGSPLLSKDEVKLRVHRFTSTATQTETVYLT
VRIVNASNEVFMTQGLRPVVVPGLLKLSNTIDGSVLRFRHSNNKNGSCTVGFSRYHSHWP
IAGQMTIGKNRQTVDAVRKDCREFLYMNLHYEHLRSPIPDVDYLPLTVELFDPSISEEVI
TEMFYLPIYIKGAIPNSPPRSSDMSLSMMDVDQFVLSTIIPGIIQAEDYETPNSQLVFNI
SKNFGDGKGYFVNINDQSTQITSFYQDDLDNHRIAYRPPNVSYTTQRHYEAELVVFDSHF
ASSMPITLHVAVRPSSTSAPRVSHNHGLVLLEGQTRPITVDDLQIVDRDNLEGIRVYVKG
GVRHGTLTVNGKQSIMFRPVDLRNGQVMYVHDDSDSTKDEIGLRINDGIHTVLATFPITI
IPKDDTPPNLVNNLGFHINQGKMKKISDDVLLAHDDDSLDYNIIYTLTDPPKAGIIVRKL
RSSNTETTIFGFRQRDILKGQVYYKHNGKDVFRDTFRFRLQDQHDPPNESDEHEFHILID
PLNENPPQMDTNALKILQVRETDVGYIGQAQLLYTDVESPPRDIVYTITTPPYFVFNTGE
RDAGYLVATHNLTMVTKEHILPQVPKFTQEDINYLKIAYLPPREDIGPLPRLVRFVYTVE
DGNRNKIYGQTFDIEVLPVNNRVPRFTTEKLLVEEGGILGITVNQLSAIDDDTPSEELKF
ICDILPKYGKLQRDGVDIGKKGVFMVEDLQKTAIRYVHDGSDVEIDTFTLTLTDGVNQAT
KVITVDIVPIDDKTPRLQKNLRPYLIVSEGSEALLTPHILAATDDDTDDESLVFLIVRQP
RYGVLQLKGQPLTKFTQKALKDELISFLHTSGEIGLKSLHDVATFIVSDQNYLASVELPV
YDLNITITPVNNQKPTILLGDPVLVSEGDVYNINENVLQVTDLDSKTKEIEFMITKQPQW
GFLENIKPSPGSEKSNAGLRINSFTYSDILDRSINYVQSNHRGVEPVHDQFELYATDGKL
NSDSQIISVNIIQANDEAPDLMLKDFTIDEGGFMMMDQSMMDAIDLDMPKDSLTMSLSQQ
PQHGQIVMMIQTRKGHVEAEVQDFTIEELHSGMQLKYKHDGSESMNDKFVVTVSDGKHDI
KRVCNVTVRARNDEKPEVIKNAGLQLDYGESGLISSIALQATDDDNGDAYLYYIVVELPK
KGILQYCPNPFSKSLDSDCRDIEPGTNFTQKDVDLNKVRYVHTTSMGESETDRFMFVLSD
GKYKRHEETFEIRIKNSRKANIALLNRGMEIREGERVAISTNNLSASDESTNAEEIVFAV
IRPPRLGKIQYIDQPTGLINSFSQLDLASQKVVYIHLTKTDITEDSFVFTVTNGLSEAKN
GEFRIKIQPLDRFLPSLVANNLLEVLQGTEEVITPHHIKATDPDTDALNLTYTIAKPPTY
GNLSNRGVMITHTFTQTDIDRGFITYTSDGSRAGLDNFLFTLSDGKHSTFLINNTAQTQP
AMSSIFVHVLKDDPPTMIVNKHPEFLEHFGKQKYGYKLNSKVLRAVDSDTRSSNLIYTMV
KKPKHGHIQNTEAKRFVRRRFTQKDLDEDSLIYIVNKDVTSTNDSFTFRVEDNRGNELNN
QHISFEWSRIEFISADMVACENVGTLSITILRRGALNQMAYVGVQIKEMSAKTGEDFVPS
SARQVQFGAGQSRATWELLIKDDGLEETNEKLRLTLVDPINAIIGDTRKLRLRLINSENG
ECPQYLGMVSSNHDGFLTHADSIMIPSKNSSTGLGDIYHTSNILSKPFKAGDNTYLNTEP
KITKKTKKKKKKNKKKNSNNKKKKKKKDVSMQNNFDKSQISPGSPTNHPVCDVSKKGLLR
FDLYTQQMFQCTGRKWQVWNAISNNDERPKSNICQQGWHEFDGYCYKYINDKLPWDDAEA
LCVSTHNGHLTSVRSSKHLKWLGHQARKKSFWIGLNDKQDTGVWKFVSGDPVAITNWKNG
RPRVKRMLHKKNCVVVKRKLKWRNKHCDRYTARFICEQSPQGLQVKETKRSRRGQLRGKR
QRRNKNAKNLKNMKNMKAFFFK
NT seq
6369 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcggaatattatacgtgtgttccttttgatatttgtgcccgtgtacgggagt
ttgttactggataagcgggatattacagttaatgttggacgttcagtgtttttagaacgt
ccggatttagtatttgtgaaaggtggacgtgacgaagaatgccgagtggaagtagtaaat
acggaccctatgacacaaagagttggaaaattagaacctacgatctttgactgtcatttc
tcggcaaagacgatcaaatacattcacaatggttcaccacttctgtcgaaagatgaagtt
aaattacgggtccatagatttacaagcacagccacacaaactgagacggtatacctaacg
gtgaggatagttaacgcatctaatgaagtcttcatgacacagggactcaggcctgttgtg
gttcctggattgctgaaactatccaacacaatcgacgggtcagtgttaaggtttcgtcat
agcaacaacaaaaacggctcgtgcaccgtcggattctcaaggtatcattcccactggcca
attgctggtcagatgacaattggcaaaaatagacaaactgtggacgcagttcgaaaagat
tgcagagagtttttatatatgaatcttcattatgagcatctgagatcaccgataccggac
gttgattacttaccattaacagttgaactttttgacccgtctatcagtgaggaagtgata
acagagatgttctatctaccaatatatattaaaggtgctatccccaactccccaccacgt
tcatcagatatgagtctgtcaatgatggacgtggaccagtttgttctctcgacgatcatt
cctggaataattcaagctgaggattatgaaacacccaattcacaattagttttcaatatc
agtaaaaattttggtgatgggaagggctattttgtgaacattaatgatcagtcaacacaa
atcacttcattttatcaagacgatttggataatcaccgtattgcttatcgacccccaaac
gttagttatacaacgcaacgacattatgaagcagaacttgttgtctttgatagtcatttt
gcatcttctatgccaataacgttacacgtagctgtgcggccatcttcaacaagtgcccca
agagtttcgcataatcatggattagttttgttagaaggacaaacacgacctatcacggtt
gatgatctgcagattgttgatagggataatttagaaggaattcgtgtctatgtaaaaggt
ggtgtccgtcacggcaccttaaccgtcaatggcaagcaaagcatcatgtttcgaccagta
gatttaagaaatggccaggtgatgtatgttcacgatgacagtgattcaactaaagacgaa
attggcctgagaataaatgatggtattcatactgtactagccaccttcccaattacaatc
atcccaaaagacgatacccctcccaatttggtcaacaatttaggtttccatataaatcaa
ggtaaaatgaagaagataagtgatgatgtgttgcttgctcatgatgacgattctttggat
tacaacattatctacactctaaccgatcctccaaaagctggtataattgtaagaaagcta
aggagctcaaacactgagaccaccatctttggattccggcagagggatatcttgaagggt
caagtgtactacaagcataatggcaaggatgtctttagggacacttttcgattcaggtta
caagatcaacacgatccaccaaacgaatcagatgaacacgagttccatatcctgatcgat
cccttgaatgaaaatccaccgcagatggatactaatgcgttgaagattctacaagtcaga
gaaacagatgtaggctatatcggccaagctcagctactttatacggatgttgaatcgcca
ccccgtgacattgtctacacgattaccacacctccttatttcgtgtttaatactggtgaa
agagatgctggttatcttgtagctacacataatcttactatggtcaccaaagaacatatt
ttgcctcaggttcccaaatttactcaggaagacattaactatttgaagatcgcgtatctt
cctccccgggaagatataggccctctaccacgactcgttcgttttgtgtacacggttgaa
gatggaaacaggaataaaatctatggacaaacctttgatatagaggttttacctgtaaac
aaccgagttcccaggtttactaccgagaaacttctggttgaagaaggcgggatattaggt
ataactgttaatcaactgtcagccattgatgacgatacaccatctgaggagttgaaattc
atttgcgacattcttcctaaatacggtaaattacaaagagatggcgttgatatcggtaaa
aaaggggtatttatggttgaagatctacagaaaactgcaataaggtatgttcacgacggg
tccgatgttgagatcgacaccttcacattaactttgactgacggtgtcaatcaagctacc
aaagttattaccgtggatattgtgccgatagatgataaaacaccgcgtcttcaaaaaaat
cttcgaccatatctgatcgtatcggaaggaagtgaggccttgttgacgcctcatatttta
gcggcaaccgacgacgacactgatgacgaatcactggttttcttgatcgttcgtcagccg
agatatggtgtacttcaactgaaaggacaacccctcacaaagtttacccaaaaagcccta
aaagacgaattgatatcattcctacacaccagtggggaaattggactgaagtccttacat
gatgttgcaacatttatcgtgtctgatcaaaactatctagcttccgtcgaacttcctgtg
tatgatttgaacataacgataacccccgtaaacaatcaaaaaccaacaattctgttgggt
gacccagttcttgtatcagagggggatgtttataacataaatgagaacgtcttgcaagtc
acagatctcgactcgaaaacgaaggaaatcgaatttatgataactaagcaaccgcaatgg
ggcttccttgaaaacattaaacctagtccagggtccgaaaagtctaatgcaggacttcgt
atcaactcattcacttacagcgatatcttggatagatccatcaactatgtacaatcaaac
caccgaggcgtcgaacctgtccacgatcagtttgaactatatgctactgacggcaaatta
aactccgattctcaaatcatctccgtcaatataatacaagcaaatgatgaagcacccgat
ttaatgctaaaagatttcactatagacgaaggaggcttcatgatgatggaccaatccatg
atggatgccattgatttagacatgcccaaagattctctaaccatgtcactatcacagcaa
cctcaacatggacaaattgtgatgatgattcagacaagaaaaggtcacgttgaagctgaa
gttcaggactttaccatcgaagaactccacagcggaatgcaattgaaatataaacatgat
ggctccgagagtatgaacgataaattcgtcgtaacggtatcggacggtaaacatgatata
aaacgtgtttgtaatgtcactgttcgggctagaaatgacgaaaaacccgaggttattaag
aatgcggggttacaactggattatggtgaatctggattaatttcaagtattgccctgcaa
gcaacggatgacgacaatggcgatgcctatctatactatatcgtggtggaattacctaag
aagggtattcttcaatattgtccaaaccctttctccaaaagcttagatagtgattgcagg
gacatcgaaccaggcacaaacttcacccaaaaagacgtggatttgaataaagtaagatat
gtgcacacaacaagtatgggtgaaagtgaaacggatagatttatgtttgtgctgtcagat
ggtaaatataaaagacacgaagaaacgtttgaaatcagaatcaagaattcccgcaaggct
aacatcgccttgttaaacaggggtatggaaatacgtgaaggcgagcgagttgctatcagc
actaataatctaagcgcatcagacgagagcactaatgcagaagaaatcgtatttgcagta
ataaggcccccgagactagggaaaattcaatatattgatcaacctacaggattaataaat
agtttttctcagctggatttggcttctcagaaagtagtgtacattcacttgacaaaaact
gacatcactgaagactcgtttgtgtttaccgttactaatggacttagtgaagctaaaaat
ggcgaattcaggattaaaattcaacctttggacagattcttgccttctttagttgccaat
aatctactagaagtgctacaaggaaccgaagaagttatcacacctcatcatattaaagct
acagaccctgacactgatgctttgaaccttacatacacaatagctaaacccccgacgtat
ggaaatctgtctaacagaggagtcatgatcacccatacttttacacaaacagacattgat
cgtggtttcattacctacacaagtgatgggtctagagcagggcttgataattttcttttt
actttatctgatggtaaacattccactttcctcattaacaacactgctcaaactcaacca
gcaatgagcagcatatttgtgcatgttctaaaagacgaccctcctacgatgatcgtcaac
aagcacccagaatttctagaacattttgggaagcaaaaatacggttataaattaaacagc
aaagtcctgagagccgtagactctgacacgcggagtagcaacttgatctacactatggtc
aaaaaacccaaacatggccatatccaaaacacagaagctaagcgattcgtaagaagacgt
tttactcaaaaggatttggatgaagacagtctgatttacattgttaataaagatgttact
agcaccaatgatagtttcactttccgggtagaggacaaccgtggcaacgaactgaacaac
caacatatatcctttgaatggtcaagaatcgagtttatatcggccgatatggtggcatgt
gaaaacgtcggaacattgtcaatcacaatactgcgaagaggtgcacttaatcaaatggct
tacgtaggtgtacagataaaggaaatgtcagccaaaacaggagaagattttgttccaagt
tcggcaagacaagtacagtttggtgcaggtcagtccagagctacatgggagttgcttata
aaagatgatgggttggaagaaacgaatgaaaagttgcgattgacactggttgatccaatc
aatgctattataggagatacgaggaagttgcgattgaggttaattaattcagaaaatggt
gaatgtccacaatatcttggaatggttagcagcaatcatgacggatttctcacacatgca
gacagcattatgattccatcaaagaattctagtactggcctaggtgacatttaccatact
tcaaacatactttcaaagcccttcaaagcgggagataacacatatttaaatactgaaccc
aaaatcaccaaaaaaactaaaaagaagaaaaagaagaacaagaaaaagaatagcaacaac
aagaaaaagaagaaaaaaaaggatgtctccatgcaaaacaattttgataaaagtcaaata
tctccaggatcaccaacaaaccatccggtgtgtgacgtatctaaaaagggtttactacgg
tttgacctttatacccagcagatgttccaatgtacgggtagaaaatggcaggtgtggaac
gccatatctaacaatgatgaacgtcccaaaagtaacatttgccagcaaggttggcatgaa
tttgacgggtactgttataaatacatcaatgataaacttccatgggatgacgccgaggcc
ttgtgtgttagtacacataatggtcatctaaccagcgttcgttcgtctaaacacttaaaa
tggttggggcaccaggcccgcaaaaaatcattttggataggtctgaatgataaacaagat
actggtgtatggaagttcgtcagtggtgatccagttgctatcactaactggaaaaatggc
cgtcctagagtaaagcgaatgttacacaagaagaactgcgtagtggtgaaacggaaatta
aaatggcggaataaacattgtgacagatacactgcacgttttatttgtgaacaaagtcca
cagggactacaagtaaaggaaacaaaacgatccagaagaggtcagttgagaggaaaacga
caacgtcgaaacaaaaacgccaaaaacttaaaaaatatgaaaaatatgaaagcatttttc
tttaagtga
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integrated database retrieval system
