Patella vulgata (common limpet): 126817583
Help
Entry
126817583 CDS
T09576
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126817583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvul03009
]
126817583
Ribosome biogenesis [BR:
pvul03009
]
Eukaryotic type
Pre-60S particles
RNases
126817583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
126817583
NCBI-ProteinID:
XP_050400601
LinkDB
All DBs
Position
4:64820457..64837970
Genome browser
AA seq
1201 aa
AA seq
DB search
MFASCGYFRGITCPYFQSGLCERPYCHFRHVKEKQKDPYPTSISQSSSTVTSTEKVENIT
SAILPNDSYFHENVSKKIENNVEKKETELTKSTGEENDNEKKEVEYDSESNDAEFPLPNP
SFQPVYNPTPKSQAIKRNPDDPLPEYCPTPITKLKRMKKPLSADLQYDPVSNYLYPISEK
NDTTVIDEPVYVPIKRSLSNDSCDLPSKKQIRLDGEASKEEDNGFILGEEISNSDVEGDH
DDAQFSDDDILMSRNNKCKKDNDCEEIFATKSYVRDNVREKGNDSEKVHEPKTVGLPKNL
KKYDIISDIMKEDKSKSNEKNISHKRSETVKKVSSDKSKDTNHRHSDKENLKNQSKSSSK
ISSEKEVKNYKSDHSKERTKYDKEKSSSRSSSSHRESNKESSSGSYKSRNKHESSSSKSQ
SGSVSSSSSSSHKKPSTSVSTSKHSGDKSSSQKESENKKSSSSSSSSTKYGSSHKSSSSA
SSSHKSSSSSSNKPSSKSSSSSRSSTSHSSSHNKTVSTSNKHDNHKNDKTQRQSSSDKSS
HKTKSSSGSSSSHRDKHNGEHKNKEKSSSSSDKEKDDKPSKRYSIEEIHADLFGSSEEED
NLSPPQEANEMSDSELLQYLDESDFSDADTYEECLKIFNETNSAKSKTPVKKDVRKRPET
TSEENAPGKKRMAHESAAKVHKKPVENVKMHLSAAQVMHNRIIAMQKHALEAAAAKKALA
EASTSGSSSMFGKKRVAHTTGHMNGKADDNKTLAITASKTEKRKAHAPTIKNIKRPTVPT
EFGSKVPTAIRQRYLNLIIDECLKFIKDEESAFKRAQEEEHVAYGRSSSKNIYLRMAVNT
IKRLRTEAESKVASPKKKIPNSQSHEATLGGSKAAKTSFTVKRSGKSQVFYGDFSGADLY
KRLTKYITSEELLQANNFPRPCPESSSSAKFYVDKSIKDVTLKDYEKVCCRCGKRFIVYP
DCEYGTKEQCSYHWGKAWKRRIAGSIETRYTCCSGELGSNGCAISKAHAYETNKYENTTG
YMKTLPTSPPIDGNYGVYAMDCEMVYTTGGMELARVTVVGSDKQPVYESLVKPDYPVIDT
NTRFSGIEDKDLENVTTTLRNVQAVLLSLFNDQTILLGHSLESDLIAVKLIHNTVVDTSL
VFPHRLGPPYKRALRNLMSDHLQKIIQNDEGGHDSNEDASACLELMQWKLKEDAKKEHRR
S
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccagctgtggatattttcggggaataacatgtccttattttcaaagcggttta
tgtgaaagaccgtactgtcattttcgacatgtgaaggaaaaacaaaaggatccgtatccc
accagtatttctcagtcatcttctacagtaacaagtacagaaaaagtagaaaatatcaca
tcagcaattttaccaaatgatagctatttccacgaaaatgtgtcgaaaaagattgaaaat
aatgttgaaaaaaaagaaactgagttaacaaaatcaactggtgaagaaaatgacaatgag
aagaaggaagtggaatacgattcagaatcaaatgatgctgagtttccattaccaaatcca
agctttcaaccagtatacaatcccactccaaagtctcaagctattaaaagaaatccagat
gatccactgccagaatattgcccaacaccaataactaagttgaaacgcatgaagaaacct
ttatcagcagatttacaatacgaccccgttagtaattacctttacccaataagtgagaaa
aatgatactactgtgattgatgagcctgtttatgtaccaataaaacgttcattgagcaat
gactcgtgtgatctcccttccaaaaaacagatacgtttagatggagaagcatctaaggaa
gaagacaatggattcatcctgggtgaagaaatcagtaacagtgatgtcgaaggtgatcat
gatgatgctcagttcagtgatgatgatattctgatgagcagaaataacaaatgtaaaaaa
gacaatgactgtgaagaaatatttgcaacaaaatcctatgttcgtgataatgtgagggaa
aagggtaatgacagtgagaaggtacatgaacctaagactgtaggcctacctaaaaacctc
aagaaatatgacatcatatcagacattatgaaagaagataagtcaaaatctaatgaaaaa
aacatttctcataaacgatcagaaactgtgaagaaagtgagttcagataaatccaaagac
acaaatcatagacattcagataaagaaaatcttaaaaatcagagcaaatcctcatctaaa
atcagttcagaaaaagaagtgaaaaattataaaagtgatcatagtaaagaacggacaaaa
tatgataaggaaaaatcaagctctagatcttcatcaagtcatagagaaagtaacaaagaa
agttctagtggcagttataagtctagaaacaaacatgagtcttcaagttcaaaatcacaa
tcgggtagtgtttcgtcaagttcaagttcgtctcataaaaaaccttcaacatcagtttcc
acatccaaacattcaggagataagtcaagcagtcaaaaagaatctgagaataaaaaaagt
agctcatcatcatcatcgtctacaaaatatggttcttcacataaatcatcctcttcagcg
tcatcatcacacaagtcatcctcttcatcatctaataaaccatcctctaaatcttcttca
tcttcccgtagttctacttcacactcatcatcacataacaaaactgtctcaacgtcaaat
aaacacgataatcataaaaatgataaaactcagagacaaagttcaagtgataaatcatca
cataaaacaaaatctagttcagggagttcctcatcacacagagacaaacataatggtgaa
cataaaaataaagagaaatctagttctagttcagataaagaaaaggatgataagccaagt
aaaagatacagtattgaagaaatacacgccgatttatttggaagcagtgaagaagaagat
aacttatccccaccacaagaggccaatgaaatgtcggattcagaattattacaatatctg
gatgaaagtgatttttctgatgctgacacgtatgaagaatgtttgaaaatattcaatgaa
actaattctgcaaaatctaagactcctgtcaaaaaagatgttcgaaagagaccagaaaca
acatcagaggaaaatgcaccaggaaagaagagaatggctcacgagtcagccgctaaagtc
cacaagaagccggtagaaaatgtaaagatgcatctgagtgcagctcaagtaatgcacaat
cgtattattgccatgcagaaacatgccttggaagcagctgctgctaagaaagcacttgct
gaagcttcaacatcagggtcatccagtatgtttgggaaaaaaagagtagctcatacaaca
ggtcatatgaatggaaaagctgatgataataaaacactagctattactgcatcgaaaaca
gaaaaacgaaaagctcatgctccaactattaaaaatattaagagaccaactgttccaaca
gagtttggttccaaagtgccaacagcaataagacaacgttatcttaatcttattattgat
gagtgcctcaagtttatcaaagatgaggaatccgcatttaaacgggcccaagaagaggaa
catgtggcctatggtcgaagttctagtaaaaatatctacttgagaatggcagtcaacacc
ataaaaagacttagaactgaggctgaatctaaagtagcatctccaaaaaagaaaataccc
aattcacaatcacatgaagccactttaggtggttcaaaggctgctaaaactagttttaca
gtaaaaagatcaggaaagagtcaagtattttatggtgatttttcaggtgcagatttatat
aagaggttaaccaaatatatcacaagtgaagaattattacaagctaataattttccacga
ccatgtcctgagtcaagtagtagtgctaaattctatgttgataaaagcatcaaagatgtc
actctcaaagattacgagaaggtgtgttgtcgatgtggaaagaggtttattgtttatcct
gactgtgaatatggaaccaaagaacagtgttcttatcattggggaaaagcttggaaacga
agaattgctggatctatagaaacaagatatacatgttgtagtggtgaattgggatcaaac
ggttgtgctatttctaaggctcacgcatatgaaactaataaatatgagaacacaacaggc
tatatgaagacattacctacttcacctccaatagatggtaattatggtgtttacgcaatg
gactgtgaaatggtatatacaactggtggtatggagttagctagagtaactgttgttggt
agtgataaacaacctgtatatgaatcattagttaaaccagattatcccgttatagatact
aatacaagatttagtggtattgaggataaagatcttgaaaatgtgacgacgactttaaga
aatgtacaagctgtattacttagtttatttaatgatcaaacaatattactaggtcatagt
ttagaaagtgacttgatagcagtgaagcttattcataacacagtagttgatacatcattg
gtatttccccatcgacttggtccaccttataaaagagccttgagaaatctgatgtcagat
catcttcaaaaaattatccagaatgatgagggtggccacgacagtaatgaagatgcttca
gcttgtttagaattgatgcagtggaaattaaaagaagacgccaaaaaagaacatcgaaga
tcttga
DBGET
integrated database retrieval system