Entry |
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Name |
(RefSeq) nucleoprotein TPR isoform X1
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KO |
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Organism |
pvul Patella vulgata (common limpet)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pvul00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126817939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pvul03019]
126817939
Messenger RNA biogenesis [BR:pvul03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126817939
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
4:53523914..53576315
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AA seq |
2332 aa
MAGNEFLSKALELSEIELLSSTTKHKLERHVADLDIKLTNAKASYESLRVNSEQQYNELE
RKLIESVTQLETETSSKKALQSKVAELEKRLSDEVEKISTLENSYQKAHEAEIKFTRLSE
RLEADKAELVERLEKKNKKIESLNDEWKAVTDKVANVEKQKCELQAKLSELQSKDITRDF
KEKKLIQERDQLMERVAWLNDQVTEKSNAYINDRKEKSVKLLELMSQIESKTEEFNHTKD
VVDGLKKNNSDQAAKINELLQKLKDARDSQMQSDEHFHQEIKSQTKLLDLYKESALENEK
KMKETTKAFEDMQKLLKEAADASRDQKEQSTAEIEQCIEQLKEKEAKIEDLEEELRNAND
LIVRIKGEGNMSLSALETLYPTAAATSKILKTGMTLTEIYSEYVKVTDSLQAEKAENSQL
KIYLDEIGKELEEKAPLLVRQREDYEAALQSNTRMAEQLNTAMVEREELLKDRDQQKRKS
NFLERETQRLQQQTVDLGRQVKRLVQEISEMKGGPIVRETSQVSSSQDITASDVVSENLV
TFRNLEELQEQNQKLLTLVRELSEKNEREEQEAVNSRTEDLQQQLETALTELNQLQSARQ
RQEELVKSIVRQRDMYKVMLQNTSDTTIPVSSEFTSRSPVRSKTTSQGADIEKQLNETKE
ALKELNVQFTTYRKEKNENEKMLNEQIEAARNKESQLQIENAKLSSRLDFSAERNKVQQS
NIDSYKIEITALSNRSQKYSSQVMKLEQTVNTLRDDLMAAQENLTRFEIQNQNLRAEKDL
LKDSERHMLEEIDRIRNENGSQNLVMLNLQAIQNNLERADFENKSRLEQQIENKDKEISS
IRRKLENIQDEHQSTIRYWENLVKTLQTEVSKERENMKAEKSKMEDANTFIQSLKQDLSA
TEAKLAAAEIKLSNSNLGDSVAGGSMSITAVSMSIDEIKDLKSQLAQANAKVKNLEKTCE
DSKRQMEQYKQIASNVEESIKQQNQTSEEFQQALEKRMEESTAAKVNLEKRIEMLEKENQ
ELNNQNIKTLEEAHNLNADLRKQLSSLQNELLDAVERRETAIATETAAKIKCEQQVQVAA
EAQDKYERELMLHAADVEALTSLKRQLADKNEPLAKSQEELKKCELELLESKTSWAEQER
LLREECKILEDRCAELSNQNKLLHEQMTKLTSQVSTIQHKSSGLDSANTSMTEETEKSSD
QLLEVIRFLRREKEIAEMKMEVSEIECNRLKHRSEHLKKQLEDANNILTKEREDSQVALT
TVSEHADILKKIQNVNILSDSNKILREERDRLKQDYLTLEAKVKKMEDNINPLQATIRNL
ETQKGLLAGEKQALESEVTRWKSRTNQLIEKCNKTDPEEQKKLMLEKDSMKRQLSSLSEE
NFKHKAEISKLNSTIQSLQNELKNVRQENVKLTQAMTTLKAQQATQQATDSDEKAKTINQ
LKKIGRKYKEQAEKIAKEFEDFKSKAASQTPAAGDNTAAIEQVKTEMTEKLTTVEKEKAD
FKTKIDEQMQEINTLKEQINEFNKEKNQLEETSRKYQDDITEYEKKQTQSKNVLSTAKSK
ITSQKEHIERLNTENTDLRQKLNETERQNKEENEMRVNMLKTQYDGRISRLENELTNSRT
SNTTADNTQIERLMKENSELQAKILQLQKQVENMSKQVTPQQQVTRTPVTMAPSVSTSDA
PKTANIRPMATSTAPVRPTTPIQHSSMAARVTASIRPMAIAPSTSTGGITPTATVMPTTV
SQQETNDEPATSSTPSSIPAASVTPRISTQVQIVTPQIETPSEVNVETSVPEPTPVSPIL
STTGPSTETTSPITPQASTSTGTTHAVTPQPSASSSSQLGKRAREDTDSQEEGDTFNKRT
RTSSQEQGIPAITVTDEHAQTITHLSPQTGSTSTSPAVEVAPLTSSTDQLQDARTEEFSP
SVLQSNIQQTMVEPMMSSHPRRRQAVAPRNQQQEDDGDIIVLGSDDEDQGYREQMEDYRE
GGEEMGLKEYTESMEEDDYDDEYDEDDDEDDEDDDEEDDEDDEDDEDSNDVVIVDNGADE
TEQQVVSIQHPVTVPVTDLPRPPANLQSMGRSQLAPFTLGPGVFDEEDGLVPSTPTLSIP
IRRADGFAEAINSPAGPQRFVFGAEGSVSQPVLAQLESQRALGMDDTRMDLSQFDEGRSP
VPVSQLVPRSGSASTDSTSVVPSTSGTVQSTESNVTEVADVPDADNEFEDDDEALLEGLQ
GEEDTTDDVKPEEETGEVEGGEDIEGVPSTSTGVTHDDDKATGDNTGAGRRKIQKIVWSE
EQASNTPTAPPTAPVVQHTRGRTARRGRGGLWRGQHFTPGSRGGPRGGYRQF |
NT seq |
6999 nt +upstreamnt +downstreamnt
atggcggggaatgagtttctttcaaaagctctagaattatctgaaatagagctactttcc
tctacaacaaaacataaattagagcgccatgtagccgacttagacataaaactaacaaat
gcaaaggctagctatgaaagtcttcgagtaaattctgaacaacagtataacgagttagaa
agaaaactaatagaaagtgttacccagttagaaactgaaacttcatccaagaaagcctta
caaagcaaagtagcagaattagagaagagattgtctgatgaagttgaaaaaatatcaacc
cttgaaaacagctatcaaaaggctcatgaagcagagattaagtttacaagattatctgaa
agacttgaagctgataaagcagagctagttgaaagacttgaaaagaaaaataagaagatt
gaatctttaaatgatgaatggaaagctgttacagataaggtagccaatgttgagaaacag
aaatgtgaattacaggcaaaattatcggagttgcagtctaaagatatcacacgagatttt
aaagaaaagaaattgatacaagagagagatcagttaatggaaagagtagcttggctaaat
gaccaagttacagaaaaatccaatgcttatatcaatgatcggaaagaaaagagtgtgaaa
ctacttgagcttatgtcacagattgaatctaaaacagaagagttcaatcatacaaaagat
gtggttgatggattgaaaaaaaacaatagtgatcaagctgccaagataaatgaactttta
caaaaacttaaagatgccagagattctcagatgcagtctgatgaacacttccaccaagaa
atcaaatcccaaacgaaacttcttgacctatataaggaatcggctcttgaaaatgaaaag
aaaatgaaagaaacgacaaaggcttttgaagacatgcagaaattattgaaagaagctgct
gatgctagtagggatcagaaagaacagagcacagcagagattgaacaatgtatagaacaa
ctcaaagaaaaagaagcaaaaatagaagatctagaagaagaattaaggaatgccaatgat
ctgattgtaagaattaaaggtgaagggaatatgagtttatcagctttagaaacactttat
cctacagctgcagctaccagtaaaatacttaaaacgggaatgactctaactgagatttac
agtgaatatgtaaaagttacagatagtttacaggcagaaaaagcagagaacagtcaactt
aaaatctatctggatgagattggaaaagagttggaagaaaaggccccattgttggtacga
cagcgtgaagattatgaagcagctttacagagtaacactagaatggcagaacagttaaac
acagccatggtggaaagggaagaattgttaaaagatcgagatcaacagaaaagaaagtca
aacttcttggaacgagagacacagagattacaacaacagacagtagatttaggccgacag
gtgaaaagattagtacaagaaatatcagagatgaaaggtggaccaattgttagagaaact
tcacaggtttcatctagtcaagatattacagcaagtgatgttgtttctgaaaacttagtt
acatttagaaacttagaagaattacaagaacagaatcaaaaattattgactttagtacga
gaattaagtgaaaagaatgaacgagaagaacaagaagctgtgaatagtagaactgaagat
ttacaacaacaattagaaacagctctaacagagttaaatcaattacaatcggctagacaa
agacaagaagaactggtgaagtctatagttagacagcgtgacatgtataaggttatgtta
caaaatacatcagataccacgattccagtatcgtcagaattcacatctaggagtccagtt
agaagtaagacaacatcacaaggtgccgatatagaaaaacaattgaacgaaactaaggag
gcattaaaagaactaaatgtacagtttactacatatagaaaagagaaaaatgagaatgaa
aagatgctaaatgagcaaattgaggcagctagaaataaagagtcacaactacaaattgag
aatgcaaaattgtcttcaaggcttgatttttctgctgaaaggaataaagtacagcagtcc
aatatagatagttataagatagaaataacagcattaagtaacagatctcagaaatattct
tcacaagtaatgaaactggaacaaactgttaatacacttagagatgatttaatggctgca
caagaaaatttaacccgctttgaaatacagaatcagaatttacgagccgagaaagatcta
ctaaaggattcagaacgacatatgttagaagaaatagaccgaataagaaacgaaaatggt
tctcagaatctagtcatgttaaaccttcaggcaatacagaataatcttgaaagagctgac
tttgaaaataaatcccgtttagaacaacagatagaaaataaagataaagaaatttccagt
attagacgtaaattagaaaatatacaagatgaacaccagtctactattagatattgggag
aatttggtgaagacactacaaactgaagttagtaaagaaagagaaaatatgaaggcagaa
aaaagtaaaatggaggatgctaatacattcatacaaagtctgaaacaagacttatcagct
acagaagccaagttagctgcagcagaaattaaactgtctaattctaacttaggagattca
gttgctggtggcagtatgtctataacagctgtatctatgtctattgatgaaataaaagat
ctcaagtctcagctcgcacaagccaatgccaaggttaaaaatttggagaaaacatgtgaa
gattccaaacgtcaaatggaacaatataaacagatagcaagtaatgtagaagagagtatt
aaacaacaaaatcaaaccagtgaagaatttcagcaagctctagaaaaacgcatggaagaa
tctactgcagccaaagtaaatctggagaagagaattgaaatgttggaaaaagaaaaccag
gaactaaataatcaaaatattaaaactctggaagaagctcacaacttgaatgctgattta
cgtaaacagttatcaagtttacagaatgagttattagatgctgtagaaagaagagagaca
gctattgcgactgaaacagcagccaagattaaatgtgaacaacaagttcaagtagcagct
gaggctcaagataaatatgaaagagaactgatgcttcatgctgctgatgtagaggcatta
acctctcttaaaagacagttagccgataaaaatgaaccgctagccaaatcccaagaagaa
ctgaaaaagtgtgaacttgaacttctagaatcaaagacatcgtgggcggaacaagaacga
ttattgcgtgaagaatgtaagatattagaagatagatgtgctgaattatccaatcaaaat
aaacttctacatgaacagatgaccaagttaactagccaagtatctactatacaacataaa
tcaagtggtttagattcagccaatacttcaatgacagaagaaactgagaaatcatcagat
cagttattagaggttatcaggttcctgagaagagaaaaagaaatagccgaaatgaaaatg
gaagtatctgaaatagagtgtaatagattaaaacatagatctgaacatttaaagaaacaa
ctagaagatgccaataatatattaactaaagaaagagaagactcacaggtggctcttacc
acagtatcagaacatgctgatatattgaagaagatacaaaatgttaatatattatcagac
agtaataaaatattacgagaagaaagagatagattaaaacaagattatcttactctagaa
gccaaggttaagaaaatggaagataatattaacccacttcaagctacaatacgtaattta
gaaacacagaaaggtttgttagcaggagagaaacaggccttagagagtgaagttactcgc
tggaaatcacgaaccaatcaattaatagagaaatgtaacaagacagatcctgaagaacaa
aagaaattaatgctagaaaaagatagcatgaagcgacaattaagttcgctaagtgaagaa
aatttcaaacataaggcagaaatatctaaactaaactccactatacagtcattacaaaat
gaactcaagaatgtaagacaagaaaatgttaaactgactcaagcaatgacaacattgaaa
gctcaacaagcaactcaacaggcaacagatagtgatgaaaaagccaaaactattaaccag
ttgaagaagataggaagaaaatataaagaacaagctgagaaaattgcaaaggagtttgag
gattttaagtctaaagctgctagtcagacgccagctgcaggtgataatacagcagccatt
gaacaggttaaaacagaaatgacagagaaattaacaacagttgagaaagaaaaagctgat
tttaaaactaaaattgatgaacagatgcaagaaattaacaccctgaaagaacagattaat
gaatttaataaggaaaaaaaccaactcgaagagacttctagaaaataccaagatgatatt
acagaatatgagaaaaaacagacacagtctaaaaatgtattatcaacagccaaatctaaa
ataacatcacagaaagaacatatagaacgtttaaatacagaaaatacagatttaagacaa
aaactaaatgaaacagaacgtcaaaataaagaagaaaatgaaatgagagttaatatgtta
aagacacaatatgatggtagaatatcaagattagagaatgaattgacaaacagtagaaca
tccaatactacagctgataatacacaaattgaacggcttatgaaagaaaactcagaactc
caggctaagattctgcagttacaaaaacaagttgaaaatatgtcaaaacaagttacacca
caacaacaagtcacccgtactccagttactatggcaccaagtgtatcaacatcagatgct
cctaaaacagcaaatattagacctatggcaacatccacagctcctgtaagacctacaact
ccaatacaacattcttcaatggctgctcgtgttacagcaagcatacggcccatggctata
gctccatctacgtctacaggggggataactcctactgctactgtcatgccaacaacagtg
tcgcaacaagaaacaaatgatgaaccagctacatcatcaacacctagttctataccagca
gctagtgttacgccacgtatatcaacacaagtacaaatagtaacacctcagattgaaaca
ccttctgaagtaaatgtggaaacatcagtacctgaaccaactccagtatcccctatatta
tctactactggtcctagtacagaaactacatcaccaataacaccacaagctagtactagt
acaggtactacacatgctgttactccacaacctagtgcatcatcatcttcacaacttggt
aaacgagctagagaagatacagatagtcaagaagaaggggatacatttaataagcgaacc
agaacatcctcacaggaacaagggatacctgcaataacagtaacagatgaacatgcccag
actataacacatcttagtccacaaactggtagtacatcaactagtccagctgtagaggtt
gctccattaacatcttctactgatcagctacaagatgctcggacagaagaattttcacca
tcagttctgcaatcgaatattcagcaaacaatggttgaaccaatgatgtcatcccatcct
agacgtagacaagctgtagcacctagaaatcaacaacaagaagatgatggtgatattata
gtactaggcagtgatgatgaagatcagggttatcgtgaacaaatggaagattatagagaa
ggaggtgaagaaatgggattaaaggaatatacagaatccatggaggaggatgattatgat
gatgaatatgatgaggatgatgatgaggatgatgaagatgatgacgaggaggatgatgag
gatgatgaggatgatgaagattctaatgatgttgtgatcgtcgataatggtgcagatgaa
acagaacaacaagtagtatcaattcaacatcctgtaactgtgccagtaactgatttacct
agaccacctgctaatttacaatctatgggtagatcacaattagctccttttacgttgggt
cctggtgtgtttgatgaagaggatggcttagtacctagtacacctacattatctatacct
atacgtagagctgatggatttgcagaagctatcaattcaccagcaggaccacagagattt
gtttttggagcagaaggttctgtcagtcaaccagtattggctcaactagaatcacaaaga
gcattaggtatggatgatacaagaatggatttatcacagtttgatgaaggtagaagtcct
gtaccagtatcacagttagttcctagatcaggatctgcgagtactgatagtacatctgta
gtaccatctacatcaggtacagttcaatctacagaatctaatgttacagaagtagcagat
gttcctgatgcagacaatgaatttgaagatgatgatgaagccttattagaaggtttacaa
ggggaagaagatacaactgatgatgttaaaccagaagaagaaaccggtgaagtagaaggt
ggtgaagatatagaaggagtacctagtactagtacaggtgtaacacacgatgatgataaa
gctacaggtgataatacaggtgctggtagacgaaaaatacagaaaattgtttggagtgaa
gaacaagcttccaatacaccaactgctccacctacagctcctgttgttcaacatacacgt
ggacgaacagctagaagaggacgtggaggattatggagaggccaacattttactccaggg
tcacgaggaggaccaagaggcggatatagacaattttaa |