KEGG   Patella vulgata (common limpet): 126818365
Entry
126818365         CDS       T09576                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126818365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvul03021]
    126818365
Enzymes [BR:pvul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     126818365
Transcription machinery [BR:pvul03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     126818365
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 HMG_box_2
Other DBs
NCBI-GeneID: 126818365
NCBI-ProteinID: XP_050401712
LinkDB
Position
4:25824010..25859969
AA seq 1728 aa
MDTVGDKDVPIFRLNEIGFRVYSDEEIKALSVKEISHPISFDNLAHPNANGLYDSSLGPY
DRGEVCSTCGQNNIHCPGHIGHIQLALPVYNPLFFKQLYRLLKGTCFECHRLTVSLVESC
LFVSQIELLDAGYVTAFLELSEHVISMVKDRDMNEMSVFIEVKHFITSFIKKIVNNGVNE
KQPGLSHIESCHKALVANFIDMIVSMKLCPHCKKKKVNIRQENNSKIVISLKSSRKIIKE
KEMIEANIKKKRQNIDDNDSTEGLDVLEMDDQKTTTIEESNEKPDESISKFFDGSMEQTL
LTPSSVKEHLRVIWKSDETILKKIFRALDFSDSDYISTDVFFMEVIPVPPCRFRPIAFRS
GGFSEHYQSVSLNRIIMDNVILKYILQSADKTNQDKTLDVEEFAQRAMNTVKGKTSTEKL
HFCWQTLQMHVNCMIDSDIDKYNKQDTRMPGIKQLFEKKTGLFRMHMMGKRVNYACRSVI
SPDPCLNTNEVGVPLVFATRLSYPQPVTPWNIHELRQAVINGPLIHPGALYVENEDGFLT
KLHPTDQLQREAIAKQLLTPSSTSKSLLGCKKVYRHLKNGDVMLLNRQPTLHKPSIQAHR
ARILPGQKTLRMHYANCKAYNADFDGDEMNAHFPQNEMARSEAYSLASTDYQYLAPKDGA
PLAGLIQDHMVSGVALTIRGRFFNRGDYFNMVYSALSDKYGKVKTLPPTIIRPHKLWSGK
QVLSTVLLNIIPEGCQPLSLNGTAKIGEKNWEKMKSNIDDKLASLGESIVIIRHGELLQG
VLDKGHYGNTPFGLVHCCYELYGGGVAGTLLSCLGRLFNAHLKLRGFTLGVADILVTKKA
NKKRSKIIRKYPRVGMEAVKKALGLQDSVSEEEMLAGWRSAHYNTTDDRGLREIDVSMKS
KTDVVQNKIANVCMPGGLEKKFPDNNLQLMVLSGAKGSMVNCMQISCLLGQIELEGRRPP
LMVNGSTLPSFLPYDTSPKAGGFVSGRFLTGIRPQEYFFHCMAGREGLVDTAVKTSRSGY
LQRCLIKHLEGVIVNYDLSVRDSDGSIVQFYYGEDGLDVQQTPFLQPKQFPFLVENRVAV
QQHTIESNPDKHKHFKKLQKRIKKWKKSNNPEVKKKYDSGFLIFCRKKGDELVTEEDRTS
TMKNGRFKASTKLCEEWRNLDENQKEKYMKKASPCPNPVLSEIWPHEDGNVRSERLDYII
DKYYTEQFDNMIKELGISDVYNKDEFECLIGSKLQQSYAQPGEAVGLLCAQSIGEPSTQM
TLNTFHFAGRGEMNMTLGIPRLREILMTASENIQTPAMNIPVHNTPQARAAAKNLQKNLS
KVRLTEVLKDIQIREEMSIEGQTMFNRYRKYHIKYQFLPRVCYKDNLSIKPSSILYYIEN
YYINQLVDVIRKRMGQSKRNKLIDTGNVKRRLDDDNEDIPPALDNDEDEESADEGDGDAT
AVKEKERMKDTQEYVGEENEKGEVTMSEDENDDDNDEGDDGVDGMDVEDDQKDVEMTSVK
PLSSTSVNARIQHLLASCPEAVDYKFDTKKQLWCEVVLQFNLSDVRLDIASVVNEHAKKV
VLHSVSGINQTFLNEQTENGESILHLMTEGINFQEMYKYADILDLNKLYSNNFKLFSQTY
GVEASARIIQQELKNVFGAYGIYVDNRHLSLLSDFMTFEGNIRPFNRIGIKNNSSPLLKM
TFETTMAFLVDSSIHSNIDRLKSPSSRIIAGQVVSCGTGSFDVLQPLI
NT seq 5187 nt   +upstreamnt  +downstreamnt
atggacacagtgggagataaagatgtacctatatttcgcctgaatgaaattggattccga
gtatatagtgatgaagaaataaaggcattaagtgtgaaagaaatatcacatccaatatca
tttgataacttagctcatccaaatgcaaatgggctttatgattctagtttaggtccgtat
gatcgtggagaagtatgttctacctgcggtcaaaataacatacattgtccgggtcacata
ggtcatatacagttagcattgcctgtatataatcctctgttttttaaacaactatatagg
ttgttaaaagggacctgttttgaatgtcatcgtttaacagtaagcctggtagaatcctgt
ttatttgtaagccagattgaattattagacgcaggatatgttacagcttttctagaatta
tctgaacatgtcatctctatggtaaaagatagagatatgaatgaaatgtccgtatttata
gaagtcaaacatttcatcaccagctttatcaagaaaattgtcaataatggtgtgaatgag
aaacaacctggattaagccacattgaatcatgtcacaaagcacttgttgctaactttatt
gatatgatagtgtcgatgaaactgtgtcctcattgtaagaaaaagaaagttaacatacga
caagaaaataatagtaaaatagttataagtttaaagtcttcaagaaagataataaaagaa
aaagaaatgattgaggcaaatatcaaaaaaaaacgtcaaaatattgatgataatgatagt
acagaaggattggatgttctagaaatggatgatcaaaagaccaccacaatagaagaatct
aatgaaaaaccggatgaaagtatttccaaattttttgatggaagcatggaacaaactctg
ttaactccatcatctgtcaaggaacacttaagagttatctggaaatccgatgaaacgatt
ttaaaaaagatattccgtgctcttgatttttctgattcagactatatttcaacagatgta
ttttttatggaagtgataccggtaccaccatgtagatttagaccaattgcttttcgatct
ggtggatttagtgaacattatcagtctgttagcttaaatagaattataatggataatgtt
atattaaaatatatcttacaatcagctgataaaacaaatcaagataaaacattggatgtt
gaagaatttgctcagagagcaatgaatacagtgaaaggtaaaacatcaactgagaaactt
cacttctgctggcagacattacagatgcatgttaattgtatgatagatagtgatatagat
aaatataataaacaagatactagaatgcccggtattaaacagttatttgagaaaaagact
gggttgtttagaatgcatatgatgggaaagcgagttaattatgcttgtcgttcagttatc
tcccctgatccatgtttaaataccaatgaagttggagtacctcttgtatttgctacccgt
ctgtcctacccacaacctgttacaccatggaatatacatgaactacgtcaagctgttatt
aatggacctttgattcatcccggggcgttatatgttgaaaatgaagatggatttttaacg
aaattacatccaactgatcagttacagagagaagctatagctaaacaactattaacacca
tcatctacatccaaatctcttctgggctgtaaaaaggtttatcgtcatctgaagaatgga
gatgttatgttattaaatcgtcaaccaactttacataaacccagtattcaggctcataga
gctcgaatactgcctggacagaaaacgttaagaatgcactatgctaactgtaaggcctat
aatgcagattttgatggagatgaaatgaatgcacattttccacaaaatgagatggcaaga
tcagaggcttattcccttgcaagtacagattatcagtatttagcacctaaagatggtgca
ccattagctgggttaattcaagatcacatggtatcaggtgtagctctaactatacgtggt
agattctttaatagaggtgactattttaatatggtatattcagctttatcagataaatat
ggtaaagttaaaacactgccaccaactattatacgtccacacaaactctggtcgggaaaa
caggtattatctacagtgttgttaaatattatacctgaaggatgtcaacctcttagttta
aatggtactgcaaagatcggagaaaagaattgggagaaaatgaaatcaaatatagatgat
aaattggcatcattaggtgaatcaatagttataataagacacggtgaattattacaaggt
gttttagataaaggtcattatggtaatacaccttttggtctagttcattgttgttatgag
ctatatggtggtggtgtagctggtaccttgctgtcatgtttaggaagattatttaacgct
catctcaagttacgtggatttacattaggtgtggctgatattcttgttactaaaaaggct
aataagaaaagatctaaaataataagaaagtatccaagggtaggtatggaggctgtaaaa
aaagcactaggtttacaagatagtgttagtgaagaagaaatgttggcaggatggaggagt
gcacattataatacaacagatgatcgaggtttaagagagatagacgttagtatgaaaagt
aaaactgatgttgtacaaaataaaatagcaaatgtctgtatgcctggtggattagagaaa
aaatttcctgataataatctacaacttatggttttatctggtgctaaaggttctatggta
aactgtatgcagatatcttgtttattaggacagattgagttagaaggtagacgaccacct
ttaatggttaatggtagtacattaccatcatttttaccatatgatacttcacctaaagca
ggtggttttgtttctggtcgatttcttactggaatcagaccacaggaatatttcttccat
tgtatggctggtagagagggtttggtagatacagctgttaaaactagccgtagtggatat
ctacaaagatgtttaattaaacatttagaaggtgttatagttaattatgatctaagtgtt
agagatagtgatggtagtatagtacagttttattatggagaagatggtttagatgtccag
caaacgccatttttacaaccaaaacaatttccattcctggtagagaatcgtgttgcagta
caacaacatactatagaatcaaaccctgataaacacaaacactttaaaaagctgcagaaa
agaataaagaaatggaagaaatctaataatccagaagtaaaaaagaagtatgattctggt
ttcctgatattttgtcgaaagaaaggagatgaactggtcactgaagaagatagaacatca
accatgaaaaatggtcggtttaaagctagtactaaactttgtgaagaatggagaaattta
gatgagaatcaaaaagaaaaatacatgaagaaagcatcaccttgtcctaatcctgtatta
agtgaaatatggccacatgaagatggtaatgtacgatcagagagattagattatattata
gataaatattatacagaacagtttgataatatgataaaagaattaggtatatcagatgta
tataataaagatgaatttgaatgtttaattggaagtaaattacaacagtcttatgctcag
ccaggtgaagctgttggtttattgtgtgctcagtctataggggaaccatcaactcagatg
acattaaacacatttcattttgctggtcgtggtgagatgaacatgacattaggtattcct
agattacgtgagatattgatgacagccagtgagaatatacaaacaccagctatgaatata
ccagtacataatacaccacaagctagagcagctgctaaaaacttacagaaaaacctgtct
aaagttagattaactgaggtattaaaagacatacagatcagagaagaaatgtcaatagaa
ggacaaacaatgtttaatcgatatagaaaatatcacatcaagtatcagtttttaccacgt
gtttgttataaagataatctgagtataaaacctagctctatattgtattatatagagaat
tactatattaatcagctggttgatgttataaggaaaagaatgggacagtctaaaaggaac
aaattaatagatacaggaaatgttaagaggcgattggatgatgataatgaggatatacca
cctgctctagataatgatgaagatgaagaatcagcagatgaaggagatggcgatgctaca
gctgtaaaagagaaagaaagaatgaaagatacccaggaatatgtaggagaagagaatgag
aagggggaagttacaatgagtgaagatgaaaatgatgatgataatgatgagggagatgat
ggtgttgatggaatggatgtagaagatgatcagaaagatgttgaaatgacatcagttaaa
cctttaagttctacatctgttaatgctagaatacaacatttattagcctcttgtcctgaa
gctgttgattataaatttgatacaaagaaacaattgtggtgtgaagttgtcttacagttt
aatctgagtgatgttagactagatattgcctcagttgttaatgaacatgctaagaaagtt
gtattacattcagttagtggtatcaaccaaacatttttaaacgaacagacagaaaatggt
gaatctatacttcatttaatgacagaaggcatcaacttccaggaaatgtataaatatgct
gatatattagatttaaataaattatatagtaataattttaaactgttttctcaaacgtat
ggtgtagaagcatctgctagaataatacaacaggaattaaagaatgtatttggagcttat
ggaatctatgtagacaatagacacctgtcactgttatctgattttatgacatttgaagga
aatattcgtccgtttaatagaatcggtataaaaaataactcctcaccattgttaaaaatg
acatttgaaacaacaatggcatttttagtggactctagtatacatagtaatatagataga
ttaaagtcaccatcatcaagaattattgcaggacaagtggtatcatgtggtacaggtagt
tttgatgtgttacaacctttaatttaa

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