Patella vulgata (common limpet): 126818384
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Entry
126818384 CDS
T09576
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126818384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvul03021
]
126818384
03036 Chromosome and associated proteins [BR:
pvul03036
]
126818384
Transcription machinery [BR:
pvul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126818384
Chromosome and associated proteins [BR:
pvul03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
126818384
Chromatin remodeling factors
BAF complex
126818384
PBAF complex
126818384
GBAF(ncBAF) complex
126818384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
ResIII
QLQ
BRK
HDA2-3
DEAD
HNF_C
Motif
Other DBs
NCBI-GeneID:
126818384
NCBI-ProteinID:
XP_050401736
LinkDB
All DBs
Position
4:complement(51476734..51501297)
Genome browser
AA seq
1666 aa
AA seq
DB search
MASEDGNMMNSTSQQQYPQPMNKMDDKNMQDDSRYPHMGNISNRGRPGMGGPLSGMPGQQ
GMNPQQNMPGGPMQGMPGGPMHGMPGSHNMGGNPASGMSSGPPPGMQGGPSPSMPSGPSP
GMPGVPSPGMRAVPSPGMRAVPSPGMRTGSSPGAQGQPMSSGPQGMHGGPPAQGMPQGHQ
GGNQGMPGGPSMGMQGQQPNMSGPNNIGGPNMPNSNMNNPNMPPNMPPGAMNSGMSGQNM
GGPVMNMGPGTGGPNTTIGPNMQPSNMSDPGSNMPQGGMNMPNSGMNGPSPNVNNMPGGG
MPNVQTAAMGPPNQSIDGNQGGIPGPRTSSFANPQLHQLRAQIMAYKLISRNQPIPETLR
LAVEGKRPLGPFPRTGDVHQQMRMQHQAPGALPHQQMQPMGRPPTSMDGPGGDHQPSTDS
DSSTPKPPTTSTPQPLPNQPAPPPSVQAMMALQQKQNRVAPVEKPKGLDPIELLNERENR
VAARISQRIQELSNLPATMSEDLKVNAMIELRALRLLNYQRTLRAEVVSCMRRDTTLETA
LNTKAYKRNKRQSLREARVTEKLEKQQKVEYERKRRQKHQEYLNAVIQHAKDFKEFHRNI
TAKIGKLNKAVMTYHTNTEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDHRLAYL
LDQTDEYISNITKLVQTHKEDLKKKKREMRGKKKKKVPKIEAGAEAQLMEPIDELSNMSN
PEKRLTVVHTATGHIISGDDAPFARDIQEWMAQNPGYEVQKDEDDDDDEEDEEEEESEPE
EEHKTPNIVTPARDDDEYTVDSESLNYYGIAHTIREKITQQASIMVYGKLKEYQVQGLEW
CVSLYNNNLNGILADEMGLGKTIQTIGLITYMIEKKRVNGPFLIIVPLSTLSNWLMEFDR
WAPSVVKIAYKGCPQTRRLLAPQLKSGKFNVLLTTYEYIIKDKSVLSKFRWKYMIIDEGH
RMKNHHCKLTCVLNTYYEAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVGTFEQWFN
APFASTLEKVELNQEETLLIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYVIKCEMSALQ
RTLYKHMQHKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPFIFQHIEEALAEHYG
IQGGIINGPEIYRASGKFELLDRVLPKLRSEDHRVLIFCQMTALMSILEDFFVSRGFRYL
RLDGMTKSDDRGHLLELFNAPNSPYFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDL
QAQDRAHRIGQEKEVRVLRLMTVNSVEERILAKARYKLNVDEKVIQAGMFDQKSTGMERR
HFLATLLTQDEENEEEEDEVPDDETVNQMIARSEEEFEIYQKMDIDRRRNEVRDGKRKPR
LIEEDELPSWMIKDEQEVDRLTFEEEEDKLFGRGSRSRKEVDYSDALTEKQWMRAIEDGN
LEEIEELPPKPRKPRKRKGDSPVQDANTPKKRRGRPPVEKMAPNPPKLTKLMKKILDVVT
KYKDNDGRVLSDMFLTLPPKKELPEYYEIICKPVDFKKIKARIKDHKYRSVDDLEDDVML
LCQNAQSFNVEGSMIYEDSIVLQSVFTNARERLEKEFNIESSDESGSEEEDGEEEEEKPV
KKSKKGESSKKKSAPEPEEKGSGRKRLTRTAKVKPVISDDDSDESS
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgaagatggaaacatgatgaattctacatctcaacagcaatacccacaacct
atgaataaaatggatgataaaaatatgcaggatgactcaagatatcctcacatgggaaat
ataagtaacagaggaagaccaggaatgggaggacctctgtctggaatgcccggacaacaa
ggaatgaatccacaacagaatatgccaggaggacctatgcaaggtatgccaggtggacca
atgcatgggatgccaggatcacataacatgggtgggaaccctgcttctggaatgtcttct
ggacctcctccaggaatgcaaggtggaccaagcccaagtatgccatcaggtccatcacca
ggaatgccaggagttccatctccaggaatgagagctgtaccttctccaggaatgagagca
gtaccatctcctggtatgagaacaggttcctcccctggagcacaggggcaaccaatgtca
agtggaccacaaggaatgcatgggggtcctccagcgcaaggtatgccacaaggtcaccag
ggcggtaatcaaggaatgccaggtggaccatctatgggtatgcaaggtcagcaaccaaat
atgtcaggacctaataatataggtggacccaatatgccgaattccaacatgaataaccct
aacatgccaccaaatatgcctccaggggcaatgaactctggtatgagtggacagaatatg
ggtggaccagtcatgaacatgggacctggaacaggtggacctaatacaacaataggaccc
aacatgcaacccagtaatatgagtgatccaggctctaatatgcctcaaggtggtatgaat
atgccaaattcgggaatgaatggtccttcaccaaatgttaataatatgcctggtggtggg
atgcctaatgtacaaactgctgctatgggtccgcctaatcaatccattgatggaaatcaa
ggtggcataccaggaccaagaacatcatcattcgctaatccacagctccatcaattaaga
gctcaaatcatggcatataaactgatatctagaaatcaacccattccagaaaccttgaga
ttagctgtagaaggtaaacgaccacttggaccattccctaggacaggagatgttcatcaa
caaatgagaatgcaacatcaggctccaggtgctctaccgcatcaacagatgcaacccatg
ggaagaccaccaacatcaatggatggaccgggtggtgatcaccaaccaagtactgacagt
gattccagcacccccaaacctcccacaactagtactccccaaccattaccaaatcaacca
gcccctcccccatcagtacaagctatgatggctcttcaacaaaaacaaaatcgtgtggca
ccagttgaaaaacctaaggggctagaccctattgaattgttaaatgaaagagaaaatagg
gttgctgctcgaataagtcaaagaattcaagagttatccaacctaccagctacaatgtcg
gaagatttgaaagtcaatgctatgattgaattgagagctctgcgtctattaaattatcaa
cgaactttgcgagctgaagttgtgtcatgcatgcgaagagatacaacattagagacagcc
cttaatactaaagcttataagcgaaacaagaggcagtcgttacgtgaagcacgtgttaca
gaaaaacttgagaaacaacagaaggttgaatatgaaagaaaacgcagacaaaaacaccag
gaatatttgaatgcggtaatacagcatgccaaggacttcaaggagttccacagaaatata
acagctaagattggtaaattaaataaggctgtaatgacttaccatacaaatactgaaaga
gaacagaagaaagaacaagaaagaatagagaaagaacgtatgcgcagacttatggctgaa
gatgaagaaggttatagaaagctgattgatcagaagaaagatcatcgtctggcttatctc
ttagatcaaactgatgagtatatatctaatattactaaactagtccaaacacataaagaa
gacttgaagaaaaagaaacgagaaatgagaggaaagaaaaagaagaaggttcctaagatt
gaagctggggcagaagcccaacttatggagcctattgatgaactatctaatatgagtaat
ccagagaagcgtttaacagtagtacatactgctactggtcatattatatctggggatgat
gcaccatttgctagagatatacaagaatggatggctcagaatcctggttatgaagtacag
aaagatgaggatgatgatgatgatgaggaagatgaagaagaagaagagagtgaaccagaa
gaagaacataaaacaccaaacattgtaacaccagcaagagatgatgatgaatatactgtg
gacagtgaatctctcaattattatggtatagcccatactatacgtgaaaaaattacacag
caagcttctataatggtttacggtaaacttaaagagtatcaggttcaaggtttagagtgg
tgtgtatctttgtataataataatttaaatggtattttggctgatgagatgggtcttggt
aaaactattcagactataggtcttattacgtacatgattgaaaaaaaacgtgtcaacgga
cctttcctgattattgtaccattatcaacgttatctaattggcttatggaatttgatcga
tgggctccatcggtggtgaaaatagcttataaaggctgtccacaaacaagaagactgtta
gcaccacaattaaagtcaggaaaatttaatgttctcttgaccacttatgaatacatcatt
aaagataaatcagttttgtccaagttccgttggaaatatatgatcatagatgaaggtcat
agaatgaagaatcatcattgtaaattaacatgtgtattaaatacatattatgaagctcca
catagactgctattaacaggaacacctttacagaacaaactaccagaattatgggcattg
ttaaatttcctgctaccctctatatttaaatcagtaggaacatttgaacagtggtttaat
gcaccttttgcctctactttagaaaaggttgaactaaatcaagaagaaactcttttgatt
attcgacgtcttcataaagtactacgtccatttttattgagaagattgaaaaaagaagta
gaatcacagttgccagacaaggtggaatatgtgataaaatgtgagatgtccgctcttcaa
agaacactgtataaacacatgcaacataaaggtgttcttttaacagatggctcggagaaa
gataaaaagggtaaaggtggtactaaaacactcatgaataccatcatgcagttgagaaag
atctgtaatcatccttttatatttcaacatattgaagaagcattagctgaacattatggt
attcagggaggcattataaatggaccagaaatttaccgagcttcaggaaagtttgaacta
ctagacagagttttacccaagttacgatcagaggatcacagagtgttaatcttttgtcag
atgacagcattgatgagtattttagaagatttctttgttagccgaggtttccgttatctg
agattagatggtatgacaaaaagtgatgatcggggccatctgttggaattatttaatgct
cctaattctccctacttcatctttttactgagtacaagagcaggtggtttaggtttaaat
ctccaatcagcagacactgtggttatatttgattctgattggaacccgcatcaggattta
caagctcaagatcgagctcatcgtattggacaagagaaagaagtacgagtgttacgttta
atgactgttaatagtgttgaagagagaatcttagctaaagctcgatataagttaaatgta
gacgagaaggttattcaagctggtatgtttgatcaaaaatctactggtatggaaagaaga
catttccttgctactttacttacacaagacgaagaaaatgaagaggaagaagacgaggta
ccagatgatgaaactgtcaatcaaatgatagctagatcagaagaagagtttgaaatatat
cagaaaatggatatagatagaagaagaaatgaagttagagatggtaaacgaaaaccaaga
ttaatagaagaagatgaattaccatcatggatgattaaagatgaacaagaggttgacaga
ctgacgtttgaagaagaagaagataaattgtttggtcgtggttctagatctagaaaggaa
gtagattattctgatgctcttacagaaaaacaatggatgagagctatagaagatggtaat
ttagaagaaattgaagaactcccacctaagcctcgtaaaccgagaaagagaaagggtgat
tctccagtacaagatgcaaatacacccaaaaaacggcgtggtcgacctcctgttgaaaag
atggctccaaatccacctaagcttactaaattaatgaaaaaaatacttgatgtggttacc
aagtataaagacaatgatggtagagtattaagtgatatgtttttaactcttccaccgaag
aaagaacttccagaatattatgaaattatttgtaaaccggtggacttcaagaaaattaag
gctagaataaaggatcataaatatagatccgtagatgacttagaggatgatgtcatgtta
ttatgtcagaatgctcaaagttttaatgtagagggatcaatgatttatgaagactctata
gtactacagtctgtgtttactaatgctagagagcgactagagaaagagtttaatatagag
tctagtgatgaaagtggatcagaagaagaggatggagaggaggaagaagaaaaaccagtt
aaaaaatctaaaaaaggtgaaagttctaagaagaaaagtgctcctgaaccagaggagaaa
ggaagtggtcgtaaaagattaactagaacagcaaaagttaagccagttatatctgatgat
gattctgatgaaagtagttaa
DBGET
integrated database retrieval system
