Patella vulgata (common limpet): 126819030
Help
Entry
126819030 CDS
T09576
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
pvul
Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvul03041
]
126819030
Enzymes [BR:
pvul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126819030
Spliceosome [BR:
pvul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126819030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
Helicase_C
DEAD
Ank_2
Ank_5
Ank
AAA_19
nSTAND3
ResIII
Terminase_4
Ank_3
PhoH
Motif
Other DBs
NCBI-GeneID:
126819030
NCBI-ProteinID:
XP_055956156
LinkDB
All DBs
Position
4:complement(10404952..10425468)
Genome browser
AA seq
777 aa
AA seq
DB search
MAARGRYFNRQGSTGNQNHGSPLPMSGSNNYGSHRNNDNSSPRPSSGSSYSSMNDPTRGP
RPNQPVCIGEEVKIGIHLAFERFRLNPEQKELEFPSSLTATERAYIHRLCEDYNLKSKSH
GKGASRCLTIYKKEGNQSSGTSVTFQLARNSRHQILSLMQRFPLTNKERQELQPKTHKST
VNEIIKDLNYKTTTGRLNNGVPQIPPQRGNSDLNSFRESLPIQEYQEDIIHTINHNQVVL
VSSETGSGKTTQVPQMILDDCFANSKPCRIFCTQPRRIAALSIAERVAAERGEKIGQTIG
YQIRLESKVSPKTLLTFCTNGVLLRTLMGGDSSLTAVTHILVDEVHERDRFSDFLLIVLR
DALVKYKNLRLVLMSATLNTDLFLQYFNRCPIALIPGTLFDVQEFFLEDILKWTEYSNKK
MLKFKKEQYKVEKQQEQLSEWCHHEMINDDKPSTTSVTDSAIDINTNTHLDEQQLELGQE
CDELEDWVIQEMDRLLGELWLTGNEDLFSQVFHLILSENVSVDYKHSETSVTPLMIASGR
GFSNIVEKLLSLGANINIKASNEWTALDWSKKFEQNDIVDMLEGHLSTLELGTEESVNQK
NDETISTEDRELLKTYQHSFDDEKVDIDLLSILLYKIHTSQPEGAVLVFLPGYDDIVALR
DRVSEDKKFEQSRYVLYVLHSSIQSSDQKRVFKQPPAGVRKIILSTNIAETSITINDVVY
VVDCGKVKEKTFDALSGITMLKSNWISKASSQQRKGRAGRCHPGICYHHKWLEDDNL
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcggggtcgatattttaatcgacagggctctacagggaatcaaaatcatgga
tcccctttgccaatgtctggttccaataactatggatctcataggaataatgataacagt
tctcctcgaccctcaagtggaagtagttattcgagcatgaatgatccaacgcgtggacca
agaccaaatcagccagtctgtatcggtgaagaggtcaagattgggatacatttagcattt
gaaagattcaggctcaatcctgaacagaaagagttagagtttccatcatctttaacagct
acagagagagcttatatccacagattgtgtgaagattataatctcaagtctaagagtcat
ggtaaaggtgcctcaagatgtctgacaatttacaagaaagaaggtaaccaatcatctggt
acatcagtcacgtttcagttagccagaaactcacgacatcagatattaagtttgatgcag
cgttttcctctgactaacaaagaaagacaagaactacagcctaaaacacacaagtcaaca
gttaatgaaattatcaaggatctgaactacaagacgaccacaggccgattaaataatggt
gtcccacagatacccccacagagaggtaactctgatctgaatagtttccgtgaaagttta
ccgatacaggaatatcaagaagatattatacatacgattaatcataatcaggtggttctc
gtatcgagtgagacaggatcaggtaaaacaacacaggtaccccagatgatattagacgat
tgttttgctaacagtaaaccctgtagaatattctgtacccagcccagacgtatagcagcc
ttgtctatagctgaacgagttgccgcggaacgtggagaaaaaataggtcaaactatcggt
tatcagatcagactagaaagcaaagtttcaccaaagacattgctgactttctgtacaaat
ggtgtgttgctacgaacactaatgggaggtgactcttccctgacagctgtcactcacata
ctcgtcgatgaagttcatgaacgagacagattcagtgatttcctgctaatcgttctacgt
gatgctttagtcaaatataaaaatctacgtctagttctaatgagtgctacgttaaatact
gatttattcctacagtattttaatcggtgtcctatagcgttaatacctggtacgttattt
gatgtgcaagagtttttcttagaagatatattaaaatggactgaatattccaacaagaaa
atgttaaagtttaaaaaagaacaatacaaagttgagaaacagcaagaacaattaagtgaa
tggtgtcatcatgagatgataaacgatgataaaccatcaacaacatcagtgacagatagt
gctatagacatcaacactaatactcacttagatgaacaacaactagaattaggacaagaa
tgtgatgagttagaagattgggtgatacaggaaatggacagattattaggggaattgtgg
ttaacaggaaatgaagatctcttttcacaagtcttccatcttattttgagtgaaaatgtt
agtgttgattataaacattctgagacgagtgtcactccattgatgatagcgtctggtaga
ggattctctaatattgtagaaaaattattaagtctcggcgccaatattaatataaaggca
tcaaatgagtggacagctctggattggtcaaaaaagtttgaacagaatgatatagtggat
atgcttgaaggtcacttatcgactctagagttaggaactgaagaatctgtcaatcaaaag
aatgatgaaactatatctacagaagatcgagaattattaaaaacgtatcaacatagtttt
gatgatgagaaagttgatatagatttattgtctattttattgtataaaatacatacatca
caaccagaaggtgctgtattagtatttttacctggttacgatgatattgttgctttaaga
gatagagtttcagaagataaaaagtttgaacaatcaagatatgttttatatgttcttcat
tcatccatccagtcatccgatcaaaaacgggtatttaaacaacctcccgcaggtgttaga
aaaattattttatcaactaatatagctgaaactagtattactattaatgatgttgtctat
gttgttgactgtggtaaagtgaaagagaaaacgtttgatgccctgtctggtataaccatg
ctaaagagtaactggatatcgaaggctagtagtcagcagaggaagggaagggctggaaga
tgtcatcctggcatctgttatcatcataaatggctagaagatgataatttatga
DBGET
integrated database retrieval system
