KEGG   Patella vulgata (common limpet): 126819093
Entry
126819093         CDS       T09576                                 
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul03420  Nucleotide excision repair
pvul04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    126819093
  09124 Replication and repair
   03420 Nucleotide excision repair
    126819093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvul04121]
    126819093
   03400 DNA repair and recombination proteins [BR:pvul03400]
    126819093
Ubiquitin system [BR:pvul04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     126819093
DNA repair and recombination proteins [BR:pvul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      126819093
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40 Beta-prop_RIG_2nd Beta-prop_EML WDR55 Beta-prop_EIPR1 ANAPC4_WD40 EIF3I Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N CNH Beta-prop_TEP1_C Beta-prop_NWD2_C Urease_linker
Other DBs
NCBI-GeneID: 126819093
NCBI-ProteinID: XP_050402896
LinkDB
Position
4:9742799..9745977
AA seq 554 aa
MSTSASGTRTSSRRSAMSRKCKEHLEEDNSSTGISGTEVTLASKLRKRMLTDLNMNEIKS
ESRGKNTTTLDTESQNICSKKSKRLEATSAVNQGSSKSLGLQIAGQKTDFICNFESRKSD
FVVKNSVSSLMSKSMNMFHLLYKTNYGMQISPKQKHTLTNPVVNQLSEFGLCRCATPFDR
RTTAMEWHPSNPNILAVGSKGGDIILWDSSTITNDKFIGGDGAGGSIQAMKFWPWNNSFL
CTASINGKLTLHDFEGRHGQILSDTMNCMDFWYCSLDVSSSHSAVLTGDNVGNILCLSEK
GQKVWNKKLHKQKVTHVEFSPRENWLFCSASVDHTVRLWDIRMIKDNKSSLAVLQHNKGV
NSAYFSLTNGCRLLTTDQHSDIKIFSAPEWRLERTVHHPHRFFQHITPIKASWHPLQDLI
VVGRYPDQNFPGYKSGERRTIDIIDSETGEVVTKLFDPSAPGIVSLNKFNHSGEALASGM
GVNILLWNRKELIAQKQEKLKEKMTDFKSNALGIGNNDPSKKRTKTDKKTKTDSKTKLST
KLKNSSQKSNTKKK
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgtctacctctgcaagtggtactaggacttcttcgagaagatcggcgatgtccagaaaa
tgtaaagaacacctagaagaagataattcatcaactggaattagtggcactgaggttact
ttagcatcaaaactacgtaaacgaatgttgacagatctgaatatgaatgaaattaagagt
gaatctcgtgggaaaaacaccacaacactggatactgaatctcaaaatatttgttctaaa
aagagtaagaggttagaagctaccagtgctgtaaatcagggttcttcaaaatcattaggc
ctacaaattgctggacaaaagacagattttatttgtaattttgagagccgtaaatcagat
tttgttgtgaaaaattcagtttcttccttaatgagtaaaagtatgaatatgttccatttg
ttgtataaaacaaattatggaatgcaaatatcaccaaaacaaaaacataccttgacaaac
ccagttgtaaatcagctgtctgaatttggactttgtcgctgtgccactccatttgataga
cgaacaacagcaatggaatggcatccatccaatcccaatatattagcagttgggtcgaaa
ggaggcgatattatactgtgggattctagtacaattacgaacgataaatttattggagga
gatggagcaggaggatctattcaagccatgaaattctggccttggaataattcttttctc
tgcactgcatccattaatggaaaacttacattacatgattttgaaggtcgtcatggtcaa
atattatccgatactatgaattgtatggatttttggtattgttcgttagatgttagttcg
tctcacagtgccgtactgacaggtgacaatgtgggtaatattttgtgtttatcagaaaaa
ggacaaaaggtttggaataagaaattacacaagcagaaagtaacacatgtggagttttca
cctcgagaaaattggttattttgttcagcatcagttgatcatactgtacgactgtgggac
attagaatgatcaaggataacaaaagtagcctcgctgttcttcaacataataagggagtt
aactccgcctattttagcctgacaaatggctgccgtcttttgaccaccgatcaacacagt
gatataaaaatattcagtgcccctgaatggagattggaaagaaccgtacaccatcctcac
cgattctttcaacatataacccctataaaggcgtcatggcatccattacaagatctaatt
gttgtcggtcgttatcctgatcagaatttcccaggatataaatctggcgaacgaagaacc
atcgatataattgattccgaaacaggagaggttgtcacaaaactttttgacccaagtgct
ccaggaatagtgtctttaaacaaattcaaccacagtggtgaggcactggcttcaggaatg
ggcgtgaatattttgctgtggaatagaaaagaactcattgctcaaaaacaggaaaaatta
aaagaaaaaatgacagattttaaatccaatgctttgggcatagggaacaatgatccgtcc
aaaaaacggacaaaaactgacaaaaaaacaaaaactgattctaaaaccaagcttagtaca
aaattgaaaaattcatcacagaagagtaacactaaaaagaaatag

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