KEGG   Patella vulgata (common limpet): 126819110
Entry
126819110         CDS       T09576                                 
Name
(RefSeq) DNA damage-binding protein 2-like
  KO
K10140  DNA damage-binding protein 2
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul03420  Nucleotide excision repair
pvul04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    126819110
  09124 Replication and repair
   03420 Nucleotide excision repair
    126819110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvul04121]
    126819110
   03400 DNA repair and recombination proteins [BR:pvul03400]
    126819110
Ubiquitin system [BR:pvul04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     126819110
DNA repair and recombination proteins [BR:pvul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      126819110
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 EIF3I ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Beta-prop_TEP1_C CNH Beta-prop_NWD2_C ASTN_2_hairpin Beta-prop_RIG_1st RAB3GAP2_N
Other DBs
NCBI-GeneID: 126819110
NCBI-ProteinID: XP_050402939
LinkDB
Position
4:9756332..9758395
AA seq 368 aa
MFHLLYKTNYGMKISPKLKHTLTNPVVTQLCQLRVCRYITPFNRRTTALEWHPSNPNLLV
VGSKGGDIILCDTSTVKNDKLFAGDGERGSIQAMKFWPWNNSFVCTASVNGTVTLHDLEG
RQSQILSGTKNSMGFWYSSVDASLSHSAVLTGDNIGYIVCLSEKGQTIWSKKLHKQKVTH
VEFSPRENWLFCSASVDHTVRLWDIRMIKNNKSSLAVLQHNKGVNSAYFSLTNGCRLLTT
DQHSDIKIFSAPEWRLERTIHHPHRFFEDVTPIKASWHPLQDLIVVGRYPDQNFPGYKSG
ERRTVDIFDSDSGELVTKLLKLYGSSGIVSLNKFDHSGEALASGMGDNILIWNREEVFAQ
KQERLKDK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgttccatttgttatataaaacaaattatggaatgaaaatatcaccaaaactaaaacat
accctaacaaatccagttgttactcagctgtgtcagttaagagtttgtcgctacataact
ccatttaatagacgaacaacagcactggaatggcatccatcaaatcctaatctgttggta
gttggatccaaaggaggtgatattatactgtgtgacactagtacagttaagaacgataaa
ttgtttgcaggagatggagagaggggttctattcaagccatgaaattctggccttggaat
aattcttttgtctgcactgcatcagttaatggaactgtaacactgcacgatcttgaaggt
cgtcagagtcaaattctatcaggtacgaagaattctatgggtttttggtattcttcggtt
gatgccagtttatctcatagtgccgtactgacaggtgacaatataggttatattgtatgt
ttatcagaaaaaggacaaacgatttggagtaagaaattacacaagcagaaagtaacacat
gtggagttttcacctcgagaaaattggttattttgttcagcatcagttgatcatactgta
cgactgtgggacatcagaatgatcaagaataacaaaagtagcctcgctgttcttcaacat
aataagggagttaactctgcctattttagcctgactaatggctgccgtcttttgaccaca
gatcaacacagtgatataaaaatatttagtgcccctgaatggagattagaaagaaccata
caccatcctcaccgattctttgaagatgtaactccaataaaggcatcatggcatccatta
caagatctaattgttgtcggtcgttatccagatcagaatttccctggatataaatctggg
gaacgaagaaccgttgatatttttgattcagactcaggagagcttgtcacgaaactctta
aaattatatggctcgtcgggaatagtgtctttaaacaaatttgaccacagtggagaggca
ctggcttcaggaatgggtgataatattttgatctggaatagagaagaagtctttgctcaa
aaacaggaacgattaaaagacaaatga

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