Patella vulgata (common limpet): 126819248
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Entry
126819248 CDS
T09576
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03013
Nucleocytoplasmic transport
pvul03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126819248
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126819248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126819248
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126819248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
EF-hand_Zip
Motif
Other DBs
NCBI-GeneID:
126819248
NCBI-ProteinID:
XP_050403140
LinkDB
All DBs
Position
4:complement(25780033..25816569)
Genome browser
AA seq
1462 aa
AA seq
DB search
MATDGGGKLKPKRSQPAQKPYERRKSLYKKVTDTVKDLLSPSWLTDIVSTVKKSPPKQNY
PSTLDEDEDEMFMSPPQSPNQVNSYSGPPRIASQLENKLPAPQPKRSRVPVPSVSLNNPA
FGSSTSHPGGSFSSSQLPLSRYGTSTNNPSTSTNRNVVTRSPIHDNVSHLATGYSFEQQT
NLLNLNEKELQQIKDNLSTGQTKSTSDSEDQHSRTMARNTSLKTDGSSQRARVWQNEVCQ
PIRPIEPVVTDKPSFKASLFGSPVIDTSLLGDDVLNQSSFYPGKTTFGGSSSVRNRSRLN
VTAPYQTALPIRKHMTPKLANNSFSAVTSSSARRILESLERMSTPLSDVKKIPMEVPSVS
DSLFSFTPSSYRRQSRSFQPSVLSRRSLDVPIRSGPPTSQIRTHSIASISRNRQTVTSTP
ISSRKVSLTQEDSNETQEASKRKEDNDGISAQLPRDKLYETPSSSSWGAGGGKMKRDKTH
HYSSKRPEDDDIMEIPSLKADFTLPVSNLPQIHFTATPIVKVDDDMAKCISETNKGELKF
SFSSPVHQSQTPVNVESPGSNVKSFTFSSPLKADDKSKDAQPSTVAFTFMSTPTTAPKLK
TTSVLGNGGVDCKSNQLSSKTEMNKSNLANFTSKSDSFKSSPVLKSGSVMDILGNGSSPK
TLKQGSVMDILGKNSTTSPVSTLKEGSVMDIQNKKDKNTVEPEFRKADTVKITATEGTIT
GNKESLSSLFSKPSGAWSCDICMVQNNPDKTKCAACEAPRPGSKPPVGSITGNKESLSSL
FSKPSGAWSCDICMVQNNPDKTKCAACETPRPGSKPSVTQATSLSVLFKKEEGSWDCNVC
LVQNKADVTKCISCETPKPGAKSTEGNSNTLSSGIKFGSSGAGTITDSGFKINTVDSNKT
NTSACGFKFGSTDSTTPVTTGGFKFTDSQSSDKVSFATDNKLSDKTTTGFSFGSKDTTSS
NPKTDTGFAFGNPKSSGEQKSETGFTFGNPKASGGEKSETGFNFGIAKSTDEGQAGSGFS
FSPPASSDNKTDNMAFGQTKTDDVNVSSGFSLGAQSNSIFGGNTNLEKGFQFNQPLKTAD
NSNSSQTNTNGQSSTGGFVFGASDSKNKIQETNNNNLVKDKSVEIKSGFSFGQSAPSSVG
GFNMGSNSVLGDSQQKLPNDFTFGGSTTNTNTGGLGVFSSAPTGNLTNTNNTSFTSSKRT
IDDDSDEPKAKKSFVFGASSSTAPNGPFDSKPTVAVQPETKNTAGPVFNFSANSTQQPNN
TGFNFGVSTPNVPVFKAVTKKIEKQSDSLFTFGGGGVGNNSQSFGNTSNNFSGAPAAFGS
SSFGGNGSTSGSTIGSTQATNAPAFGASSATPAFGASGQTSAFGNSSNAGFQFSATPNLS
FTGNSGSSTFQFSGKSNESGNATTAQTPQTPAFAFGGPGPAAVAPTTSFTAPNFGTPGQP
GSFNIGAGATDRKIKKAVRRKR
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgatggagggggcaaacttaagccaaagcgttctcaaccggcacaaaaaccc
tatgagagaagaaagtcattgtacaagaaagttacagatacagtaaaggatttattgtca
ccctcctggttaaccgatatagtttcaactgtaaagaagtcaccaccaaaacagaattat
cccagtacattagacgaagatgaagatgaaatgtttatgagtccaccgcagtcaccaaat
caggtgaattcttacagtgggcctccaagaattgcatctcagttagaaaataaactaccg
gctcctcagcctaaacgatctagagtgccagtaccttcagtttccctgaataatccggct
tttggttcttcaacttctcatccaggtggaagttttagttcgtcgcagttaccgttatca
agatatggtactagtactaataaccctagtaccagtacaaatagaaatgttgttacaagg
tcacctatacatgataatgtatctcatttagccactggttattcgtttgagcaacagacc
aatctgttaaatttaaatgaaaaggaattacagcaaataaaagataacctgtctacaggt
caaactaaatccacatcagattcagaagatcaacattctaggacaatggctagaaatact
agtttaaaaactgatggctcatcacaaagagctagagtttggcagaatgaagtgtgtcaa
ccaatacggccaatagaacctgttgttactgacaaaccctcttttaaagcctcattattt
ggttcacctgttatagatacaagtttactgggtgatgatgtgttaaatcaatcatctttt
tatcctggtaaaactacatttggaggatcgtcatctgtcagaaacagaagtcgtttaaat
gttacagctccatatcagactgctttaccaatacgcaaacatatgacaccaaaattagcc
aataactctttcagtgctgttacaagttcatctgccagaagaattttagaatcgttagaa
agaatgtccacaccattatcggatgtgaaaaagattcctatggaagttccttctgtctcg
gactctttgttttcctttacgccatcaagttacagacggcagtcccggtctttccaacca
tctgttttatcacgaagatctcttgatgtccctataagaagtggcccacccactagtcaa
ataagaacacattctatagcttctatatctagaaatagacagacagtaacatccacacca
atatctagtagaaaagtctctttgacacaagaagattcaaatgaaacacaagaagcttca
aaaagaaaagaagataatgatggcatatcagcacaattgccaagagacaaattgtatgaa
acaccctcatcttcatcgtggggtgcaggtggaggtaaaatgaaacgagataaaacacat
cattattccagtaaaaggccagaagatgatgatattatggagattcccagtttaaaggct
gattttacattacctgtttccaacttacctcaaatacattttacagctacacctattgtt
aaagttgatgatgatatggccaaatgtatatctgaaactaataaaggagaattaaaattt
tctttctcctcaccagtacatcaatcacagacacctgtcaatgtggaatcacccggtagt
aatgtcaaaagttttacatttagttcacctttaaaagctgatgataaaagtaaagatgct
caaccatcaacagtggcatttacttttatgtcaacaccaactacggcccctaaacttaaa
actacatctgtgttaggtaatggaggtgttgattgtaagtccaatcagttgtcatcaaaa
actgagatgaacaagtccaacttggcgaattttacttctaaaagtgacagctttaaatca
tcacctgtgttgaaatctggaagtgttatggatattttgggtaatggatcatcacctaag
acgttaaagcagggaagtgtgatggatatattaggaaaaaattcgacaacttcaccagtt
tccactttaaaagaaggaagtgtcatggacattcaaaataaaaaggacaaaaatacagtt
gaaccagaattcaggaaagccgatacagtaaaaattacagcaacagagggaacaattaca
ggaaataaagaatcattatcatcactattttctaaaccatctggagcatggtcatgtgat
atctgtatggtacaaaataatcctgataaaacaaaatgtgctgcatgcgaggccccaaga
cctggttccaaaccaccagtgggatcaattacaggaaataaagaatcattatcatcacta
ttttctaaaccatctggagcatggtcatgtgatatctgtatggtacaaaataatcctgat
aaaacaaaatgtgctgcatgcgagaccccaagacctggttccaaaccatcagtgacacaa
gctacaagtttgtcagtattatttaagaaagaagaaggttcatgggattgtaatgtatgt
ttagttcagaataaagcagatgttacaaagtgtatatcttgtgaaacacctaaaccaggc
gccaaaagtacagaaggaaatagtaatacattatcatcaggtattaaatttggatcaagt
ggtgctggtacaatcacagattctggttttaaaattaatacagttgattcaaataaaaca
aatactagtgcctgtggttttaaatttggatcaacagactcgaccacacctgtgacaacg
ggaggatttaaatttacggacagccaatcttcagataaagtttcttttgcaactgataat
aaactgtctgataaaacaacaactggattcagttttggttctaaggacaccaccagttca
aatccgaaaacagacactggatttgcttttggtaatcctaaatcatctggtgagcagaag
tctgaaacaggttttacgttcggtaatcccaaagcctctggtggggaaaaatcagagacc
ggctttaattttggaattgcgaaatctactgatgaaggtcaagcaggaagtggttttagt
tttagtcccccagcctcatctgataataaaactgataatatggcatttggccaaacaaag
acagatgatgttaatgtgtctagtggttttagtttaggtgctcaatcaaactctatattt
ggtggtaatacaaatttggaaaagggctttcagtttaatcagcccttgaaaactgcggat
aattctaactcttcccaaacaaatacaaacggtcagtcatctactggaggctttgtgttt
ggagcttcagattctaagaataaaattcaagaaacaaacaataataatttagtgaaagat
aaaagtgtagaaataaaaagtggttttagttttggacaatcagcaccatctagtgttgga
ggttttaatatggggtcgaattctgttttaggtgatagtcagcaaaagttaccgaatgat
tttacatttggtggatcaacaactaatacaaatacaggaggattaggtgttttttcttct
gcaccgactggtaatcttacaaatacaaataatacaagctttacttcatctaaacgtact
attgatgatgatagtgatgaaccaaaagccaagaaatcatttgtatttggtgcatcttcc
tcaacagcacccaatggtccttttgattctaagcctacagtagcagttcaaccagaaacc
aagaatactgcaggacctgtatttaattttagtgctaactcaacacaacagccaaataat
acaggatttaattttggtgtttccactcctaatgtgccagtttttaaagcagtaaccaag
aagatagagaaacaatctgactcattatttacatttggtggtggtggtgttggaaataac
agccagtcttttggtaacacaagtaataatttctctggtgcgcctgcagcttttggtagt
tccagttttggtggcaatggttctacatcaggatcaacaattggatcaacacaagcaacc
aatgcaccagcatttggtgccagtagtgccacacctgcttttggtgcttctggccaaact
tcagcatttggcaattcatctaatgcaggattccagtttagtgccacacccaatctaagc
tttactggaaatagtggtagttcaactttccaattcagtggaaaatctaacgaatcaggc
aatgctacaacagcccaaacaccacaaaccccagcttttgcttttggtggtccaggacca
gcagctgttgcacctacaacttcatttactgcaccaaattttggtaccccaggtcagcct
ggtagttttaatattggggctggagctacagatagaaaaataaagaaagcagtcagaaga
aaacggtag
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