Patella vulgata (common limpet): 126820376
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Entry
126820376 CDS
T09576
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126820376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126820376
03012 Translation factors [BR:
pvul03012
]
126820376
Enzymes [BR:
pvul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126820376
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126820376
Translation factors [BR:
pvul03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126820376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
ATPase
NACHT
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126820376
NCBI-ProteinID:
XP_050404237
LinkDB
All DBs
Position
5:complement(76583624..76589766)
Genome browser
AA seq
1100 aa
AA seq
DB search
MFPFRLVFYRSGSGFIGSKFFPPVCDMSDYGRYGDGYGRRGQGYRGYKGRGRGYRYNDKE
YSENKQRDYEFGGHRGYDREEGQGHRHEGGGGDRGRGGRGRPPGLKGRDIGLWYAAKSRA
KKEKTERCHRPVVHMNRTEEKEIRSVLNNFDIKPPVSLKKHSYNLRDSTSKSKQNSYEPT
ETKISYGSDWFDNCDQKSEYSEPLNLETGAASSSYSAASQQGLGIGSQYSGDKSEGIHTR
FTQEDDEDLDISAFKDMVELSKFESDFIELDSDVSEFYAFSPSSELDSLYKSELENKNMR
PEYQKMLKFREKLPSFKMQDEIIETLARNQVVVIGGETGCGKTTQVPQFILDEEIRQGRG
SQCHIICTQPRRISAISVAERVAQERAVRCGGEDVGYMIRLESRLPRPRGSILFCTTGCV
LKFLESDPSLTRATHVILDEIHERDLHSDFLMIILKDLLPKRPDIKVILMSATLNAEMFS
GYFHNCPMLHIPGFTFPVEEYFVEDVLEMLNYRVEAAQSRPKRLFGLKKHEAQNRIQLQE
SWLQTIKGDYSYNTISSLRNLMADEDKVNINLISNLITYIVQNKPDGAILVFVPGWSEIS
NLNKCLLDQPMFNSSNFRIIPLHSLMPTVNQKQVFDRPPPGVRKIVIATNIAETSITIDD
VVYVVDAGKIKVKDFEPENNLSTLESKQVSLANAKQRRGRAGRVQPGVCYRLYTRQEESM
MIDCFPPEMLRTRLEEVCLQIKILKLGKILPFVSKAMEPPSILALDHAITTLQDLNALDK
HEELLPLGYHLARMPVDPHTGKMILFGAMFGCLDPVLSVAASLSYKNAFYTPLGKESEAD
EARRLLSADSHSDHILLINALKKWEKAKSNGNEYQFCREFFLSVNVLRLLKEMKKQLAKL
LQEVGFTTSSDPNDPSANIHSSNLSLIKAVVCAGLYPNVAKIGKTPRASGKGTTTVKLNL
KGGQKAAMHPVSVNAKCSSFKSRWVIFHQMLKTSAIYVHDCTTISPYPLLFFGGDIRLIY
DEGDCVSVDDWIVFKASPETAQLVKDMRFQLDRLLERKITRPGSTDWSTGSKESKLMNVI
IDLITKEDDQINWADEEADY
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgtttccatttcgactcgtcttttatagaagtggaagtggctttattggaagcaaattc
tttcccccagtttgtgacatgtcggactatggaagatatggtgatggttatggacgtaga
ggtcaaggttacaggggatacaaaggtcgaggtcgcggctacagatataatgataaggaa
tattcagaaaataaacaaagagactatgaatttggaggtcacagaggttacgacagggaa
gaaggtcaaggtcataggcatgaaggaggaggaggggatagaggaagaggaggaagagga
agaccacctgggttgaagggacgagatattgggttgtggtatgctgccaaatcaagggcc
aagaaagaaaaaacagaacgttgtcatagaccagtcgtacatatgaacagaacggaagaa
aaggaaatcagatctgttttaaataatttcgacatcaagccacctgtatctttaaaaaaa
cattcttacaatctaagggattccacatccaagagtaaacaaaattcctacgagccaact
gaaacaaagatatcctacggtagtgactggttcgacaactgtgatcagaaatcagaatat
tcagaaccattgaatctggaaacgggagcagcttccagtagttattcagcggcatcacag
caaggtttaggcataggatcacaatacagcggtgataaatcggaaggtattcatacacgc
tttacacaggaagatgacgaagatttagatatttcagcttttaaagatatggtagaactc
tctaaatttgaatcagacttcatcgaattggactctgacgtcagtgaattttacgccttc
agtccgtctagtgagttggatagtttgtataaatctgaactggaaaacaaaaatatgcga
ccagaatatcaaaaaatgttgaaatttcgtgaaaaactcccgtcctttaagatgcaggat
gaaataatcgagacgttggctagaaatcaggtggttgtcatcggcggtgagacaggatgc
ggaaagacaactcaggttccccagtttattttggatgaagaaatacgtcaaggtcgcggg
tcgcagtgtcacatcatctgtactcagccccgtagaatcagtgctatatcggttgccgaa
agggtcgctcaagaacgtgcggtccgatgtgggggagaggatgtagggtatatgataagg
ttagaaagtcgtttgccaagacctcgcggttcaatcctcttctgtacaaccggatgtgtt
ttgaaatttcttgaatctgatccatccttgaccagagctacgcatgttattcttgatgaa
atccacgaacgcgatttacactccgattttttgatgattattctcaaagatcttcttccc
aaaagaccagacattaaagttattctaatgagcgccaccctgaatgcggagatgttttct
ggatatttccacaactgtccgatgctgcatatccccggatttacgtttcccgttgaagaa
tattttgttgaggatgttttagaaatgcttaattatcgcgttgaagcggctcagtctcgt
ccaaaacgcctatttggactgaagaaacatgaggcacaaaacagaattcagcttcaagaa
tcctggctgcaaacaataaagggagattactcttataacacaatcagtagtttacgcaac
ttgatggctgatgaggataaagtcaatataaatctaatttctaatttaattacgtatatt
gttcaaaacaaaccagatggcgctattcttgtgttcgttcccggctggagtgaaatcagt
aatttaaacaaatgtctgttggatcaaccaatgttcaactctagtaactttagaattatc
ccccttcattccctcatgccaactgtgaaccaaaaacaggtctttgatagacctccccct
ggtgtacgtaaaatcgtcatagcaacaaatatcgcggagactagtatcaccatagacgat
gttgtgtacgtggtcgatgctggcaaaattaaagttaaagatttcgaacccgagaacaac
ctgagtactttggaatcgaaacaagtatcgttagccaacgccaaacaaagacgtggacgg
gcaggaagagtgcagcctggggtatgttatcgtctctacacacgacaagaagaatccatg
atgattgattgttttcctccggagatgctccgaacgcgactagaggaagtctgtctccaa
ataaagatcctgaaattaggaaagattttaccgtttgttagtaaagccatggaaccacct
tcaattctagctctagatcatgccattacaacacttcaagatttgaacgctctcgataag
cacgaggagttattgcccttgggatatcatctagcgagaatgcctgtagatcctcatacc
ggtaaaatgattctatttggagcaatgtttggatgtctcgatccagtattatcagtcgcg
gccagtttgagttataagaatgctttctatacgccacttggtaaagaatcggaagcagac
gaagctcgtcgtctgctctccgctgacagtcatagtgaccatatactccttatcaacgcg
cttaaaaaatgggagaaagctaaatccaatggaaacgaataccaattctgtcgggaattc
tttctgtcggtaaatgttctcaggttattaaaggagatgaaaaaacaactggctaaactt
ttacaggaagttggttttactacaagttcggatcccaatgatccgtctgccaacatccat
tctagtaatctgagtctaatcaaagcagttgtgtgtgccggactgtatccaaatgttgca
aaaatcggcaaaacacccagagcgtcaggcaaagggacaacgactgtaaaattgaatcta
aaaggcggtcaaaaggccgccatgcatcccgtgtcagttaacgcaaaatgtagttcgttt
aaatcgcggtgggttattttccaccagatgttaaaaactagtgctatttatgtccacgac
tgtacaacgatttctccgtatcctctgttgttttttggtggggatattcggctaatttat
gacgagggtgattgtgtgtctgttgatgattggatagttttcaaggcctctcccgaaact
gctcaactcgtgaaagatatgagatttcagttggatcgtctgttggaaagaaagataact
cgtccaggatcgactgattggtcgacgggaagtaaggaatccaaattgatgaacgttata
atagatttaatcaccaaagaagatgatcaaataaactgggcagatgaagaggctgattat
tag
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integrated database retrieval system
