Patella vulgata (common limpet): 126821379
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Entry
126821379 CDS
T09576
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126821379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvul03021
]
126821379
03036 Chromosome and associated proteins [BR:
pvul03036
]
126821379
Transcription machinery [BR:
pvul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126821379
Chromosome and associated proteins [BR:
pvul03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126821379
PBAF complex
126821379
GBAF(ncBAF) complex
126821379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
Motif
Other DBs
NCBI-GeneID:
126821379
NCBI-ProteinID:
XP_050405747
LinkDB
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Position
5:complement(61247175..61261718)
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AA seq
614 aa
AA seq
DB search
MASLQKKKDGSPNNKFFESVETIAQFDSVRTWLHKNGRKYTQADPPTNKGLASLTVQLLQ
FQEETFGKQNANPPLTKLPMKCFMDFKPNGGLCNIFLAVFKFKSDQGWRRFDLQSPSRMD
RNVEMFMNIEKALIHNKCLTLPAIHIRSDVDRILVPKLKDIIKRHQGTLADSADNATHIV
YTLPSQSPPDEDFFRPILKRDKYTMVHWWYTPDSYDMWVSDPPIDYDPETPSSHQGPWEV
TARWLLDLEEFNEWMNEEDYLAEDEFNGEVPGKSKDKVKKSNRLKLTVDDLNSDSERRDK
KDKKSKRKRSPSPVPEKKKRKSARTPGGASSTKKRSMREEEEEEDLTKDMDEPSPEPNIQ
EIHIAKQVTGSRSQKDSELQPIKGATLMDLDEDTSDKGDEKGEATPMSDDGSKKEKEEQD
DNVTEQTHHIIIPSYSAWFDYNSIHAIEKRALPEFFNGKNKSKSPEIFLAYRNFMIDTYR
LNPTEYLTSTACRRNLAGDVCAIMRVHALLEQWGLINYQVDADSRPTCMGPPPTSHFHII
GDTPSGLVPINPPRLNQPSAAQQIVDLDKNKDKEDSSKDMSSFGLKTDIYAKKAMKVSAA
AALAAAAVKAKVGP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttgcaaaagaagaaagatgggagtcctaataacaaattctttgaatcagtg
gaaacaattgctcagtttgactccgttagaacatggctgcacaaaaacgggagaaagtac
actcaagccgatccacccaccaacaaaggtttagccagcctaacagtacaacttttacag
tttcaagaagaaacttttggcaaacaaaatgccaacccaccacttacaaaattacctatg
aaatgttttatggacttcaaaccgaatggtggcctgtgtaatatatttcttgcagtgttt
aaatttaaaagtgaccagggatggagaagatttgatcttcaatctccatctagaatggac
agaaatgtagaaatgtttatgaacattgaaaaagctttgattcataataaatgtttgact
ttgcctgccatccatattcgttctgatgtcgacagaatccttgtccccaaattgaaagac
atcatcaaacgacatcaaggaactctagctgatagtgctgataatgctactcacatagtg
tacacactaccatcacaatctcctccagatgaagactttttccgacctatattaaaacga
gataaatatacaatggtacattggtggtacacacctgacagttatgatatgtgggtgagt
gatccacctatagattatgacccagaaacaccaagttcacatcaaggtccatgggaggta
accgctcgatggttattagatttagaagaatttaatgaatggatgaatgaagaagattac
ttggccgaagatgaatttaatggtgaggttcctggcaaatcaaaagacaaagttaaaaaa
tcaaaccgacttaagcttacagtagatgatttaaattcagactctgaaagaagagataaa
aaagataagaaaagtaaaagaaaaagatcaccatctcctgttcctgaaaaaaagaaaaga
aaaagtgctagaactccaggtggtgccagttccactaagaaacggtcaatgagagaagaa
gaagaggaagaagatttaacaaaagatatggatgagccatcacctgaacctaatatacag
gaaatacatattgctaaacaagttacaggttctagaagtcagaaagatagtgaactacaa
cccattaaaggtgctacattgatggatttagatgaagacaccagtgacaagggagacgag
aaaggggaagctactccaatgagtgatgatggttctaagaaagagaaagaagaacaagat
gataatgtgacagaacaaacccatcatataataatacctagttattcagcctggtttgat
tataattcaatacatgctatagaaaaacgagcattaccagaattcttcaacggcaaaaat
aaatcaaaatcaccagaaatttttttggcatatcgtaattttatgatagatacctacaga
ttaaatccaacagaatatttaacaagtacagcatgtagaagaaatctggctggtgatgtc
tgtgcaattatgagagttcatgctttgttagaacagtggggtttgattaattatcaagta
gatgccgattcaagacctacatgtatgggaccacctcctacttctcatttccatattatt
ggtgatacaccatcaggtctagtacctattaaccctcctagacttaatcagccatcagca
gctcaacagatagtagatctcgataaaaataaagataaagaggacagtagtaaagatatg
tctagttttggtctcaaaacagatatttatgccaaaaaagcaatgaaggtttctgcagca
gcagcactagcagcagctgctgttaaagccaaggttggtccataa
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