Patella vulgata (common limpet): 126821732
Help
Entry
126821732 CDS
T09576
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126821732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvul03041
]
126821732
Enzymes [BR:
pvul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126821732
Spliceosome [BR:
pvul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
126821732
Complex C
U4/U6.U5 tri-SnRNP related factors
126821732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
AAA_30
PWI
Motif
Other DBs
NCBI-GeneID:
126821732
NCBI-ProteinID:
XP_050406181
LinkDB
All DBs
Position
1:complement(34251527..34271295)
Genome browser
AA seq
1031 aa
AA seq
DB search
MSVEKWVSERLFDLLGISDKYIAQYFVGLANKSGSEDDFVDRLRDTGTVEIDDNIINFTK
ELYHKVPHKQKAVKTLTVQQQSQLDLEKKNQTFQLLSDGEDLEEDYKIPTKKKKENKRQK
HLRKKQESESSSESEKDVPVSRGRQAESSSEDEMDALEKERLHDLQERDEFANRMKDKDK
DKTRNVASKSEKRAYEEAKKRLQMETEDKKKIIPEIRKKSRRDYLKKRQADKLYDLEGDV
ADEEYLFKDVRLSSREKKELEYKKRVLKLASEHRKAGDIEKVSRYHMPKDDVKPEDKYVE
DELERGNYEQKRWEEDHLHAATLKFGAKDAKTKNKVKEYDVIMDEEIEFVQTLKMPGVGK
NKEKDEMMDSSKLKKMSLEETRKSLPIYPFKQDLIDAIAEHQVLIIEGETGSGKTTQIPQ
YLHDAGYTKNGMKIGCTQPRRVAAMSVAARVSQEMGWKLGNEVGYSIRFEDCTSERTILK
YMTDGMLLREFLSEPDLGGYSILIIDEAHERTLHTDVLFGLVKDIARFRPDLKLLISSAT
LDAQKFSEFFDDAPIFRIPGRRFPVHVYYTKAPEADYIDAAVVSVLQIHVTQPIGDILVF
LTGQEEIETAQEMLLERTRKLGSKIKELVILPIYSTLPSDQQAKIFEPAPPGGRKVILAT
NIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLQVTPISKASANQRAGRAGRVAAGKC
FRLYTAWAYKNELEDNTIPEIQRTNLGNVVLLLKSLGINDLINFDFMDPPPHETLVLALE
QLYALGALNHRGELTKLGRRMAEYPVDPMMSKMIIAAEQYKCSKEIITIAAMLSVNNAIF
YRPKDKIVHADTARQNFFRPGGDHLTLLNVYTQWEETDYSTQWCYENFIQHRSMKRARDV
RDQLESLLERTEIEITSDVGNTVGIRKAITSGYFYHTVRLSKGGQYKTVKHQQTVMIHPN
SSLFEEHPRWIIYFELVFTTKEFMRQVIEIENSWLMEVAPHYYKARELDDGATKKMPKRI
GKSKNDLTRTY
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagaaaagtgggttagcgaacggttattcgatttattaggaatatctgacaaa
tacattgctcagtattttgttggattggcgaacaagtcaggaagtgaagatgattttgtt
gatagactaagggacaccggaactgttgaaatagatgataatattattaactttaccaaa
gaactctatcataaggtacctcataaacagaaggcagtgaaaacattaactgttcaacaa
cagtcacagttagatttagagaaaaagaatcaaacttttcagttattatctgatggagaa
gatctggaggaagattataaaatacctaccaagaagaaaaaagaaaataaaagacaaaaa
cacttgagaaaaaaacaagaatctgaaagtagtagtgaaagtgagaaggatgttcctgtt
agtcgtggtcgtcaagctgagagttcatcagaagatgaaatggatgccttggaaaaagaa
agacttcatgatttacaggagagagatgaatttgctaatagaatgaaagataaagataag
gacaaaactagaaatgttgcttcaaagtcagaaaaaagggcatatgaagaggctaagaaa
cgtctacagatggaaacagaagataaaaagaaaatcattccagaaatacgaaaaaaatct
cgacgagattatttgaaaaaacgtcaagctgataaattatatgatttagaaggcgatgtt
gcagatgaagaatatttattcaaagatgtcagattatcaagcagagagaaaaaagaacta
gaatacaaaaaacgtgtcttaaaactagcgtcggaacataggaaagccggagatattgag
aaagttagtcgatatcacatgccaaaagatgatgtaaagccagaagataaatatgtagag
gatgaattggaacgggggaattacgaacagaaacgatgggaagaggatcatttacatgca
gccaccttgaagtttggtgctaaagatgctaaaactaaaaataaagtaaaagaatatgac
gttataatggatgaagaaatcgaatttgtacagacgttaaaaatgcctggtgttggtaaa
aataaagagaaagatgaaatgatggattcttctaagttaaaaaagatgagtttagaagaa
acacgaaaaagtttacctatttatccatttaaacaagatttaattgatgctattgctgaa
catcaggttcttattattgaaggtgaaacaggttcaggaaagactactcagatacctcaa
tatctacatgatgcaggttatactaaaaatggaatgaagattggttgtacccagcctcga
cgtgttgcggcaatgtctgttgctgctcgtgtttcacaggaaatgggatggaagctgggt
aatgaggttggttatagtatacgttttgaagattgtacatcagagagaaccatattaaaa
tatatgacagatggtatgttattaagagaatttcttagtgaacctgatctaggagggtac
agtattttgattattgatgaagctcatgaaagaactcttcacactgatgtattatttgga
ttagtcaaagatattgctagattccggccagatttaaaattacttatttccagtgctact
ttagatgctcaaaaattttcagaattttttgatgatgctcctattttccgtatccctggt
cgaagatttcctgttcatgtttattatacaaaggcaccagaagctgattatatagatgct
gctgtagtatcagtgttacagattcatgtaacacaaccaattggtgatatacttgtattt
cttactggacaagaagaaatagaaacagctcaagaaatgttgctggaaagaacaagaaaa
ttaggatcaaagataaaagagttggttatattacctatatattctacattaccatcggat
caacaggccaagatatttgaaccagcaccacctggtggtagaaaggttattcttgcaact
aatatagctgaaacatcattaactattgatggtattatatatgtcattgatccaggcttc
tgtaaacaaaaaagttataatgctaaaacaggaatggaatctctacaagttacacctata
tctaaggcatcagccaatcaaagagctggtcgagcaggtcgtgtcgctgctggtaaatgt
tttagactgtatacagcatgggcgtacaaaaacgaactggaagacaacactataccagag
atacagagaacaaatctaggaaatgttgttctgttattaaagagtttaggtataaacgat
ttgattaattttgatttcatggatccaccacctcacgagacattagttttagctttagaa
cagctgtatgcattaggtgccttaaatcatcgaggtgaattaaccaaattaggtcgacgt
atggctgaatatcctgttgatccaatgatgtcaaaaatgattattgctgctgaacaatat
aaatgttctaaagagataatcacgatagctgccatgttgtctgttaacaacgccatattt
tatcgacctaaagataaaattgttcatgctgacacagctagacagaatttcttccgtcct
ggtggagatcacctgactttattaaatgtgtacacccagtgggaagaaaccgattattcg
acacagtggtgctatgaaaactttattcaacatagatctatgaaacgtgctcgagatgtg
cgtgaccaattagaatctctgttagaaagaacagaaatagaaataacatcagatgttggt
aatactgttggtattcgtaaggcgataacatcaggttatttttatcatactgttagatta
agtaaaggtggacaatataaaacagttaaacatcaacaaactgtcatgatacatcctaat
agttcattatttgaagagcatcctcggtggattatatattttgaattggtttttacaaca
aaagaatttatgagacaggtcatagaaattgaaaactcttggttaatggaggtggcaccg
cattattataaagctcgggaattagacgatggcgctaccaaaaagatgccgaaaagaatt
ggaaaatctaagaatgatttaactaggacatactaa
DBGET
integrated database retrieval system
