KEGG   Patella vulgata (common limpet): 126821841
Entry
126821841         CDS       T09576                                 
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    126821841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvul03019]
    126821841
   03016 Transfer RNA biogenesis [BR:pvul03016]
    126821841
Enzymes [BR:pvul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     126821841
Messenger RNA biogenesis [BR:pvul03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     126821841
Transfer RNA biogenesis [BR:pvul03016]
 Prokaryotic type
  tRNA degradation factors
   126821841
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase KH_1 S1
Other DBs
NCBI-GeneID: 126821841
NCBI-ProteinID: XP_050406310
LinkDB
Position
5:26411974..26429737
AA seq 762 aa
MMSIKCLCKVCGTPLSRIKYRLNVIRRYVSNPWRDAKSTETNVKVGQSSLKISTGKLARF
SDGAAVVELGNTSVLVTAVSKTKTTPASFLPLTVDYRQKAAAGGRIPTNYIRRELGASEK
EILTGRVIDRSLRPLFPKGYFYETQLICNLLAVDGVNDPDVLSINAASAALSLSDIPWNG
PVGAVRVGYIDDEVVINPTRRQLALSTLNLIITGSDKKKVVMLEGSAENILQQDFLKAIK
EGVKETQNIIREIQNLQKIYGQPKREFIPAAGCDQEISEAVKSVAETRIKEVLEDVTHDK
ISRDRALFDIKSDMKEMFKESYPDTESYKIADCYDAVVKDVFRTLILDNEKRCDGRGLTN
LRDIKCSVDMFKTLHGSALFQRGQTQVLCTVTLDSLQSALRLDPMSILTGDLKEKNFMLH
YEFPPYATNETGKPGGVGRREIGHGALAEKGLRPIIPTNYPFTIRLTSEVLESNGSSSMA
SVCGGSLALMDAGVPVSETAAGVAIGLVTRPSPENPNEIQDYKILTDLLGIEDYMGDMDF
KLAGTRKGITAIQADIKLSGLPLKIVVEAVLQAIEAKSYIIGIMNNTIPRSRSERKEWGP
VTEKLNIPIAKRSRFIGIGGYNLRKLTNDTGVQVTTIDESNFQIYAPNNEAMAEAKEMIE
EFLKDDREPELEFGAIYTGTITEIRETGLMVQLHPNLQPVYLHNSQLDQRKINHPSVLGF
EVGQEIQVKYFGRDPTNGKIRISRKVLHSIPTSIMKNLAPKG
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgatgtccataaaatgcctttgtaaagtttgtggaacacctttatctaggattaagtac
agattaaacgtcataagaagatatgtaagcaatccatggcgagacgcaaaatctactgaa
acaaatgtcaaagttggtcaaagttcattgaagatcagtacaggaaaactggcaagattt
tcagatggagcagctgtagttgaacttggaaacacttcagtattggttactgctgtaagt
aaaacaaaaaccacaccagcttcatttcttcctttaacagttgattatagacagaaagct
gcagctggaggtagaatacctacaaactatatccgtagagaacttggtgcatcagaaaaa
gaaatattaactggaagagtaatagatagatctttaagaccgttatttcctaaaggttat
ttttatgaaacacagttaatatgtaatttattggccgtagatggtgtaaatgatcccgat
gttttaagtataaatgcagcttcagcagcattatcactgtcagatataccatggaatggc
ccagttggtgctgttagagtaggatatatagatgatgaagttgtcattaatcctactaga
agacagttagctcttagtacattaaacctcattataacaggatcggacaagaaaaaagta
gtgatgttagaaggttcagcagaaaatattttacagcaagattttctcaaggctataaaa
gaaggagtaaaagaaacacagaatattatcagagaaatacaaaatttacaaaaaatatat
ggtcaacctaaacgcgaatttatacctgcagcaggctgtgatcaagaaatatcagaggca
gtaaaaagtgtagcagaaactagaattaaagaagttttagaggatgttacacatgataaa
atatctcgagaccgtgcattatttgatattaaaagtgatatgaaagagatgtttaaagaa
agttatccagatacagagagttataaaatagctgattgttatgatgccgttgttaaagat
gtattccgtacattaattctagataatgaaaaaagatgtgatggtcgtggtttaacaaat
cttcgtgatataaaatgtagtgttgatatgtttaagacattacatggttcagctttattt
caacgtggtcaaactcaggttctttgtaccgtgactttagatagtttacagtcggcttta
agattagacccaatgtccattttaacaggggatttaaaagagaaaaacttcatgctacat
tatgagtttccaccttatgctactaatgaaactggaaaaccaggaggagtgggtagaaga
gaaattggtcatggtgctttggctgaaaaaggattaagaccaattattccaaccaattat
ccctttacaattagactaacatcagaagtgttagaatcaaatggttcatcatcaatggcg
tctgtgtgtggtggtagtttagcattaatggatgctggggtaccagttagtgaaacagca
gctggtgtagccataggtctggtgacacgaccttcgcctgagaaccccaatgaaatacaa
gattataaaatattaacagatttactgggtattgaagattatatgggggatatggatttt
aaactagcaggaacaagaaagggtattacagctattcaggcggacattaagctctcaggg
ttaccattaaaaatagtggtagaagccgtcctacaggcaatagaagcaaagagttatatt
atcggaataatgaataatactatacctagaagtagaagtgaaagaaaagagtggggacct
gttacagaaaagctgaatattccaattgccaagcgatctcgatttattggaattggtgga
tacaacttacgaaagttaaccaatgacacaggagtacaagttacaactatagacgaatca
aattttcaaatctatgctcccaataatgaagctatggcagaagcgaaagaaatgatagaa
gaatttttgaaagatgatagagaaccagaattagaatttggtgctatttataccggtact
ataacagaaataagagaaactggtttaatggttcaacttcatcccaatctacagccagta
tatttacataattcacagttagatcaaagaaagattaatcacccaagtgtccttggtttc
gaagtgggacaagaaatacaggtcaaatattttggacgagatcctacaaatggaaagata
cggatttctcggaaagtcttacactccatcccaacatctatcatgaaaaacttagctcct
aagggctga

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