Patella vulgata (common limpet): 126821841
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Entry
126821841 CDS
T09576
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126821841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126821841
03016 Transfer RNA biogenesis [BR:
pvul03016
]
126821841
Enzymes [BR:
pvul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
126821841
Messenger RNA biogenesis [BR:
pvul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
126821841
Transfer RNA biogenesis [BR:
pvul03016
]
Prokaryotic type
tRNA degradation factors
126821841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
126821841
NCBI-ProteinID:
XP_050406310
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Position
5:26411974..26429737
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AA seq
762 aa
AA seq
DB search
MMSIKCLCKVCGTPLSRIKYRLNVIRRYVSNPWRDAKSTETNVKVGQSSLKISTGKLARF
SDGAAVVELGNTSVLVTAVSKTKTTPASFLPLTVDYRQKAAAGGRIPTNYIRRELGASEK
EILTGRVIDRSLRPLFPKGYFYETQLICNLLAVDGVNDPDVLSINAASAALSLSDIPWNG
PVGAVRVGYIDDEVVINPTRRQLALSTLNLIITGSDKKKVVMLEGSAENILQQDFLKAIK
EGVKETQNIIREIQNLQKIYGQPKREFIPAAGCDQEISEAVKSVAETRIKEVLEDVTHDK
ISRDRALFDIKSDMKEMFKESYPDTESYKIADCYDAVVKDVFRTLILDNEKRCDGRGLTN
LRDIKCSVDMFKTLHGSALFQRGQTQVLCTVTLDSLQSALRLDPMSILTGDLKEKNFMLH
YEFPPYATNETGKPGGVGRREIGHGALAEKGLRPIIPTNYPFTIRLTSEVLESNGSSSMA
SVCGGSLALMDAGVPVSETAAGVAIGLVTRPSPENPNEIQDYKILTDLLGIEDYMGDMDF
KLAGTRKGITAIQADIKLSGLPLKIVVEAVLQAIEAKSYIIGIMNNTIPRSRSERKEWGP
VTEKLNIPIAKRSRFIGIGGYNLRKLTNDTGVQVTTIDESNFQIYAPNNEAMAEAKEMIE
EFLKDDREPELEFGAIYTGTITEIRETGLMVQLHPNLQPVYLHNSQLDQRKINHPSVLGF
EVGQEIQVKYFGRDPTNGKIRISRKVLHSIPTSIMKNLAPKG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccataaaatgcctttgtaaagtttgtggaacacctttatctaggattaagtac
agattaaacgtcataagaagatatgtaagcaatccatggcgagacgcaaaatctactgaa
acaaatgtcaaagttggtcaaagttcattgaagatcagtacaggaaaactggcaagattt
tcagatggagcagctgtagttgaacttggaaacacttcagtattggttactgctgtaagt
aaaacaaaaaccacaccagcttcatttcttcctttaacagttgattatagacagaaagct
gcagctggaggtagaatacctacaaactatatccgtagagaacttggtgcatcagaaaaa
gaaatattaactggaagagtaatagatagatctttaagaccgttatttcctaaaggttat
ttttatgaaacacagttaatatgtaatttattggccgtagatggtgtaaatgatcccgat
gttttaagtataaatgcagcttcagcagcattatcactgtcagatataccatggaatggc
ccagttggtgctgttagagtaggatatatagatgatgaagttgtcattaatcctactaga
agacagttagctcttagtacattaaacctcattataacaggatcggacaagaaaaaagta
gtgatgttagaaggttcagcagaaaatattttacagcaagattttctcaaggctataaaa
gaaggagtaaaagaaacacagaatattatcagagaaatacaaaatttacaaaaaatatat
ggtcaacctaaacgcgaatttatacctgcagcaggctgtgatcaagaaatatcagaggca
gtaaaaagtgtagcagaaactagaattaaagaagttttagaggatgttacacatgataaa
atatctcgagaccgtgcattatttgatattaaaagtgatatgaaagagatgtttaaagaa
agttatccagatacagagagttataaaatagctgattgttatgatgccgttgttaaagat
gtattccgtacattaattctagataatgaaaaaagatgtgatggtcgtggtttaacaaat
cttcgtgatataaaatgtagtgttgatatgtttaagacattacatggttcagctttattt
caacgtggtcaaactcaggttctttgtaccgtgactttagatagtttacagtcggcttta
agattagacccaatgtccattttaacaggggatttaaaagagaaaaacttcatgctacat
tatgagtttccaccttatgctactaatgaaactggaaaaccaggaggagtgggtagaaga
gaaattggtcatggtgctttggctgaaaaaggattaagaccaattattccaaccaattat
ccctttacaattagactaacatcagaagtgttagaatcaaatggttcatcatcaatggcg
tctgtgtgtggtggtagtttagcattaatggatgctggggtaccagttagtgaaacagca
gctggtgtagccataggtctggtgacacgaccttcgcctgagaaccccaatgaaatacaa
gattataaaatattaacagatttactgggtattgaagattatatgggggatatggatttt
aaactagcaggaacaagaaagggtattacagctattcaggcggacattaagctctcaggg
ttaccattaaaaatagtggtagaagccgtcctacaggcaatagaagcaaagagttatatt
atcggaataatgaataatactatacctagaagtagaagtgaaagaaaagagtggggacct
gttacagaaaagctgaatattccaattgccaagcgatctcgatttattggaattggtgga
tacaacttacgaaagttaaccaatgacacaggagtacaagttacaactatagacgaatca
aattttcaaatctatgctcccaataatgaagctatggcagaagcgaaagaaatgatagaa
gaatttttgaaagatgatagagaaccagaattagaatttggtgctatttataccggtact
ataacagaaataagagaaactggtttaatggttcaacttcatcccaatctacagccagta
tatttacataattcacagttagatcaaagaaagattaatcacccaagtgtccttggtttc
gaagtgggacaagaaatacaggtcaaatattttggacgagatcctacaaatggaaagata
cggatttctcggaaagtcttacactccatcccaacatctatcatgaaaaacttagctcct
aagggctga
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