Patella vulgata (common limpet): 126821885
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Entry
126821885 CDS
T09576
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
pvul
Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126821885
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
126821885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
AAA_29
Motif
Other DBs
NCBI-GeneID:
126821885
NCBI-ProteinID:
XP_050406427
EnsemblRapid:
ENSPVUG00005014568
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All DBs
Position
5:complement(67646643..67658920)
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AA seq
467 aa
AA seq
DB search
MSDPLDRDRSGRRRRRRDNKPIRKERDSREHDPSPTSSKPPIILGLAKPSQDPGASSNNS
SPSAGSGIASKLPDKPIVVLRSRDDNRPVPSTNQSSNTLSTGEINTPPHITRQPSVGHLV
FEASSQNRLVAPPEMKHSIKLVDETLRWCDNAMEMLLDQTDYLVIGAIGLQGSGKSTILS
LLGGNSPQDTYRNYIFQPQTKETKEEGSHQTNGIDMFVSSERIILLDAQPVMSASLLDNL
IRHDKKYPTEYSSAEYCIEMQSLQIATFLFTVCNVVLVVQDWFTDVNFLRFLQNAEMLKP
PTPSSSHDGGSSQDDTPDYYPNVVFVQNKGSVEDFGLESYKAMQQTLLRVFENSRLKSQG
CVSLATGGLLPGINNRTVETDFNLFILPTMEYYKNEQDSILSFLPEYRGYPSFNSLIKCL
RNQLFSIPRTPLTHANLSEKNWFHYAARTWESVRKSQLLADYNRLLP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacccgttagacagagatagaagtggaagaagaagacgcagacgagataataaa
ccaattagaaaggaacgtgattctagagaacatgatccgtcaccaacatccagtaaacca
ccgattatcctgggtctggctaaaccatcacaagatccgggtgcatcaagtaataactcc
agtccatcagccggttcaggaattgctagtaaattaccagataaacccatcgtagtacta
cgctctcgagatgacaacagaccagtgccatctaccaatcagtcgtcaaatacattgtca
acaggggagataaataccccaccacacataactagacaaccatcagttggacacctagta
tttgaagcgtcatcacagaatcgtctagtagctccaccagaaatgaaacacagtataaaa
ttagtagatgagacattacgctggtgtgataatgctatggagatgttgttggaccagaca
gattatttagttattggtgctattggtctacaaggtagtggaaagtccacgatattatct
ttattaggtggtaactcccctcaggatacatacagaaattatatatttcaaccccaaact
aaagaaacaaaagaagaaggaagccatcaaacaaatggtatagatatgtttgtgtcgtcg
gagagaattatattattagatgcacagcctgtaatgagtgcatcattactggacaatctg
atacgacatgataaaaaatatccaacggaatatagttcggcagaatattgtatcgaaatg
cagtcattacagatagcaacatttctatttactgtttgtaatgtagtcttggtcgtacaa
gactggtttactgatgttaatttcctaaggtttttacagaatgcggagatgttgaaacct
ccgacgccatcttctagtcatgatggtggttcgagtcaggatgatacacctgattattat
cctaatgtcgtttttgtacagaataagggcagtgtagaagattttggtttagaatcatat
aaagccatgcaacagacgttattacgagtatttgaaaattctcgattgaaatcacaaggt
tgtgtatcactagctacaggtgggttgttacctggaatcaataacagaacagtagaaact
gattttaatctgtttattctacctaccatggaatattataaaaatgaacaagattcgatt
ctaagtttccttccagaatatcgaggctacccaagttttaactctttaataaaatgttta
cggaatcagttattttctatacccagaacaccactgactcatgctaatttatctgagaaa
aactggtttcattatgctgcacggacatgggaatccgtgagaaaatcacaattattggct
gattataaccgacttctgccgtga
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