Patella vulgata (common limpet): 126822534
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Entry
126822534 CDS
T09576
Name
(RefSeq) protein trachealess isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pvul
Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvul03000
]
126822534
Transcription factors [BR:
pvul03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
126822534
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
bHLH_HIF1A
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
126822534
NCBI-ProteinID:
XP_050407427
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All DBs
Position
5:80120198..80202297
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AA seq
846 aa
AA seq
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MNDQAYFHWDLLRQPLQPPGFGMGASFFDVNSILEVRKEKSRDAARSRRGKENYEFYELA
KMLPLPAAITSQLDKASIIRLSISYLKLRDFSGHGDPAWNRDGQLNKGLKGGGRRRTNMA
VEIFETRQGTHVLQSLDGFGFAISNDGRFLYISETVSIYLGLSQVEMTGSSIFDYVHQAD
HPELAEQLGLCLPQCSSSSMSSPNSSSDDVSSSRPRSVTPPGERGFVMNPNPQKGMDRSF
CVRMKSTLTKRGVHVKSQGYRVVHILGRMRHQLSFSVNRKQPPPLLGLVGVAIAMPPPTI
TELRIDNDTFITRLTPDFKLVYCEPIICELMDLSAEDVNNKLLYDFCHAADLTKLRKAHV
DLLAKGQVLSDYYRLTNRNGGYVWIQTCATTIYNNKNNDEQSIIAINYVLSGVECDHIVL
DTWQLPPSSHRGTDQSDHSDHSEIGSQPGSLSPQIEDQAMRNKPNMDSTTEERISSPPET
CHNLKKETTKDEKMSKDLVEDLSLYGERTDKDTKNSRRKMDKPRKRKRDNDNSQLDFSID
KKLRNNFSYSDGSEVLCPSSLDSSSNSIISASPQDLSFKSLNHNTESDKDWTLANSSTTG
EATPSSVKELEAAMNRHLPATDSKDSHKTDQMTRSYPKKGTIQWAGSNNANHTESGEILP
ATNFLRTLYANRESVIRCNNRPTFYNEMSPNLLTPPSADAYKDQPCFSVSNLSKSTLNGH
YPNMAAYSSASLSVSMTAASDSYGMTPPSSVSPQEKLQSPFGDPNYAENCTSTSHGNSHL
TLKQPYHVTAMTTNPMEYNGVKSPYFSSVSSYPSVEDYQPEVNHETVSYEPCSRSVLPWY
PVSFSS
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcaagcatattttcactgggatctgctgagacagcctctacagccacctggt
ttcggcatgggtgcttcgttctttgatgtcaacagtatcttagaagtgcgtaaagagaaa
tcacgcgatgctgcacgatcacgaagaggaaaagagaattatgaattttatgaattggct
aagatgttgcctttacctgccgccattacaagtcagctggacaaagcctccattatacgt
ctgtcaatcagttatctaaaattacgcgatttctctggtcatggagatcctgcgtggaat
cgagacggacagttgaataaaggtctaaaaggtggtggaagacgaagaaccaatatggct
gtggaaatatttgaaacgcgtcaaggaacacatgttctacagtcattagacggatttggt
tttgcgatatctaatgatggaaggtttttgtatatatccgaaacagtatcaatatatctc
ggactttcacaggtagagatgacaggtagtagtatatttgattatgtacatcaagctgat
catccagaattagcagaacaacttggtctctgtcttccacaatgtagttctagttccatg
tcatcaccaaactcttcatctgatgatgtttcctcatcacgaccacgatccgtcacacct
cccggagaacgagggtttgtaatgaatcctaatccacagaaaggaatggatcgatcgttt
tgtgttcgtatgaaatctacgttaaccaagcgaggtgttcacgttaaatcacagggctac
agggtcgtccatatactgggtagaatgagacatcaactgtcattctctgtcaaccgtaaa
caaccaccgcccttattaggtttggtaggcgtggctatagcaatgcctccgcccactatc
acagaactacgaattgacaacgatacatttataactcgccttacaccagattttaaatta
gtctactgtgaacccataatctgtgaattaatggatttatcagctgaagatgtcaataat
aaattactctacgatttctgtcatgcggctgatctcacaaaattacgtaaagcacatgtt
gatttattagctaaaggtcaggtgttgtccgattattatcgactaactaatagaaatggt
ggttacgtatggatacagacatgtgctactacaatatataacaataaaaataacgatgaa
cagagcattatagccattaattatgttttaagtggtgtggaatgcgatcatattgtttta
gatacgtggcaactaccaccgtcatctcatcgtggtaccgaccaatcagatcacagcgat
cacagtgaaatagggtcacaaccaggttctttgagtcctcaaattgaagatcaagcaatg
cgaaacaaacccaatatggacagtacaacggaagagagaatatcgtcaccacccgaaact
tgtcataatttaaaaaaagaaacaaccaaagatgaaaagatgagcaaagatttggtggaa
gatttgtcattatatggtgaaaggaccgacaaggatacgaaaaatagtcggaggaaaatg
gacaaaccgcgaaagcgaaagcgtgataacgataattcacagttagatttttcaattgat
aaaaagttacgcaataatttcagttattctgacggatcggaggtgttgtgtccatcgtcg
ttagattcgagcagcaatagtataatctcagcgtcacctcaagatttgtcgtttaaatct
ttaaatcataatactgaatctgataaagactggacgttagcaaactcctcgacaacaggg
gaggcaactcccagctctgttaaggaattggaggcggccatgaacagacatttaccagcc
acggacagtaaagactctcataaaacggatcagatgacacgatcctaccctaaaaaggga
accatccaatgggcagggtcaaataatgcaaaccacacagaaagcggggagatcctacca
gccaccaattttttacgtactttgtatgcgaatcgtgaatctgttatacgctgcaataac
cgtccaacattttacaacgagatgtctcctaatttattaacgccaccttcagcagacgcc
tacaaggatcagccatgttttagtgtctcaaacttgtcaaaatctacgttaaatggacat
tatccaaatatggctgcctactcgtcagcctctctttcggtgtcaatgactgctgccagt
gattcatacggcatgacaccgccgtcatctgtgtcaccgcaggaaaaacttcagtcacct
ttcggcgatccaaattacgcagaaaactgtaccagcacgtctcatggtaattcccatttg
acgttaaaacagccataccatgtgaccgccatgacaaccaatcctatggaatataatggc
gtaaaatcgccatatttctcgtcagtctcatcataccctagtgtcgaagactatcaacca
gaagtgaatcatgaaactgtttcgtacgaaccgtgttcccgttccgtgttaccatggtat
cctgtctctttctcatcttga
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