Patella vulgata (common limpet): 126823214
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Entry
126823214 CDS
T09576
Name
(RefSeq) uncharacterized protein LOC126823214
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126823214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvul03041
]
126823214
Enzymes [BR:
pvul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126823214
Spliceosome [BR:
pvul03041
]
Complex C
Other components
Step II factors
126823214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_DEAH11
OB_NTP_bind
Helicase_C
IBR
DEAD
IBR_1
KH_DEAH11_2nd
IBR_2
ResIII
AAA_22
RBD_DEAH11
zf-RING_2
nSTAND3
RRM_1
AAA_19
SLFN-g3_helicase
KH_1
ATPase
AAA_7
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
126823214
NCBI-ProteinID:
XP_050407829
LinkDB
All DBs
Position
6:complement(24617957..24628866)
Genome browser
AA seq
2122 aa
AA seq
DB search
MHRDGRHYSPERRDSRHYSPERRDSRHYSSEHRGGRHYSPDHRNGGHYNPDRRDGRHYRS
EYRDSRHYSPDRRDARCHSPYSQKGRRYSPERCAEEDKRESTIVNVYMNPEKKNTANNEQ
YQERRSYISVPPPEITPGPQLSYLAPSSRYPPGLPGGLLPTPGNYFPANSIPQMVHAQQF
MVPPPPLMGTIGNPGSSMPSFSIPSNQPLSSNYDSSSRYKSQNSGKYGRSRPSSTSSSQS
MPSDMRGSRQNLLETKASTGMSSMPSNMTGSRSDIRGGGRGREGSNMRGRGEGISSNSGR
RRGRRGQNKQDGADNISKSSNQMVDKHPKTGKNPTLLFMVFKNKNDDSFDYTSCLSKRTE
KLKSLDYMIESFKTVGNDRILLVSFPSKSASTKVIKLFRKTNASSDIEILCFMRQNLPDY
LSELKSVDTESKKIPEEKQVQPQQETRKAKKKKRAGDSEAKQVKQRETNVYVTLYDTVKF
EDMEGFLKTRMGCGSVYPFKLIASKIDDKGTKTEVIIQFPSEAMALSAMNSIGDSNVDSP
TQISCSMTPSSDASDTKEVRLSKLLADIQTRSDYKLKDHSVKIQAALEDISQVVIKQNIS
VAEYQRRMEEKSALESKLTELRSQETEFCSFLTRVKTKLSESVMSDDFDTILTNHSKSFG
IESRRLDSALPIYARRADIVECVKNNQVTIIRGETGSGKSTQMVQYLYENLSSDKIIVCT
QPRKVACISLASRVAEELLIPLGQGVGYKTGMKYKTSDKTKIVFMTDHSLLNECLKDPLL
KKYSCVIIDEAHERSIYTDLLLGIVKKCLPQRNDLRVIISSATIDIKVFSDYFKGSQSMQ
IAGRTFPVEEVWLSDEEHAKLDSYMDGAVKLAAKIHKEKHEGDILIFMTTPLETEKCKES
LEKILGLTNDYICLPLHGQLHADEQQAVFKSLAKGIRKIVFATNTAETSITIPGVKFVID
TGLAKEMNFDAKRGINTLSVETISKSSAEQRKGRAGRTAAGTCYRLYSQKSYQDMKSSNI
PEILRVHLGQVLLKLLELNVNPNECDFVESPNPEAMASALRNLEELKAMDEYKITEQGKW
LAKIPFEPQLGTIVKLGFDNGLIYDALVLTTLISSGSYIFYRGGSDADKDNLDLLKTKFC
DSRGDCLTFLNVYKEWINQPENKKSKWCFDNGINNKAIRGARETITEIMSVLKKELNIEV
KREFSNDEEALEILQKIITLSFRNNISHYIGHKNAGYFVPTLNQQVYLHPSSVLKTLNNT
SEWVVYTNILQTSKYFITTVTPVKEEWILEIAKENKLFDIDEAKKKKISNIHTECFGPTS
FSFFVGPRYTKLRKYESILTEKCSSIVMLEADRDRGEIRVFSSKFTLDAKAALAQWVNEA
RNAMVSRSTEYRLGTKESRSGGVRIVLGSGGEGKLILMQNEYRTVFITKPNSKTTSKERI
IEKFSKFGDIADCWEEKRSNQRWGRVTFTSGIAAIAAVEGTKTDFDEVAIPEFKLSENPD
GLFKTRLIWSRRPSKGMAFVDVELLCLAQAVSLGRINVLGELASVSLDAKSATSLCVRKI
PLTATETDVRNSVYEAMGYITEEDRQNVHRVTVVREKAFTSTPHILESIRAEIENRIVQV
IGSKEFTVDIMKPRKDGDTIYKAHVKFSRPDHGKLACTRLNGILNIGGQIVEMTPDISSY
MNVSRHVYDLMKGAVEETIQAMNFLEFKHHVRLLDNDRVIINLYSTKPDDLARVKSVLEG
ILKGEVIECWRNENYRHLFLKSGRKFIRDVQERTSTYIQVDERQYTISIYGTAANFTSAQ
TEFQNHLNEILMGTGKEIDLRAPGQPNGLMKNLIKEYGMNLEKLVDECNLKSALLDHKRQ
MVKLIGDPQNIDQAISVILMMSKNLTKNQKQTSTVEEDFPECCACLCPIEDTSQLYRLEY
CGHAYCFDCLGRQITVAIQSKDLPILCGEEECQKPLVWNDFVNSFKKAQVNPQALVGSAV
TRFMMNDKHDAYRHCLTPDCPMIYRVTSEGNVFSCYECGIRICTTCHVEYHDGLSCQQYK
ANVMDKLQVEIYLKEYGNTTKHCPGCKILIEKNYGCNHMVCSACKISFCWLCSASFASSG
LCYDHLNKVHGGIMTEDDLLYD
NT seq
6369 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgggatggtagacattacagtccagagcgtcgggatagtagacattacagtcca
gagcgtcgggatagtagacattacagttcagaacaccggggtggtagacattacagtcca
gatcatcgaaatggtggacattacaatccagatcgtcgagatggtaggcattacaggtct
gagtatcgggatagtaggcactatagtccagatcgtcgggatgctcgatgtcatagtcca
tatagtcagaaagggcgacgctacagtccagaacgttgtgcagaagaagataaacgagaa
tcaacaattgttaatgtgtatatgaacccggaaaagaaaaatacagctaacaatgaacaa
tatcaagaaagaaggagttacatttcagtaccaccaccagaaattacacctggaccccag
ctgagttatctagctccgtctagtaggtatccaccaggactgccaggtggattactacca
acaccaggaaattattttcctgctaattccatcccacagatggtccatgctcaacaattc
atggtcccccctcctccgctaatgggtaccattggaaatccgggatcatccatgccaagc
ttcagcataccatctaatcaaccattatcaagtaattacgatagctcttccagatacaaa
agtcagaactctggtaaatacggtagaagtagaccttcaagcacatcaagtagccagagt
atgccgagtgatatgagaggctcgagacaaaatttactggaaaccaaggccagtacagga
atgagtagtatgccaagcaacatgacagggtccaggagtgacatcagaggagggggtaga
ggaagagaagggagtaatatgagagggcgtggagaagggatatcgagcaatagtggtaga
agaagggggagaaggggtcaaaataaacaggatggggctgataacatctccaaatcctca
aaccagatggtggataaacatccaaagacggggaaaaatccaacattacttttcatggtt
ttcaaaaacaaaaatgatgactcgtttgactacaccagttgtcttagtaaaagaactgaa
aaattaaaaagcctagactatatgattgaatcattcaaaaccgtaggtaatgatagaatt
cttctagtaagtttcccatctaaatcggcctcgactaaagtgattaaactgtttcgcaaa
acgaacgcctcctctgatattgaaatactctgttttatgagacaaaatttgccagactat
ttatcagagctaaagtcagttgacactgagtctaaaaagatcccagaagaaaaacaagtg
caaccacaacaggaaacgcgcaaggcgaagaagaaaaagcgagcaggtgatagcgaggcc
aagcaggtaaaacaacgtgaaacaaatgtctatgtaacactgtatgatacagttaaattt
gaagatatggaaggattcttgaagacaagaatgggatgtggttctgtttacccattcaaa
ttaatagcttcaaagattgacgataaaggcaccaaaacagaagtcattatccaatttcct
agtgaggcaatggcattgagtgctatgaacagtattggagacagcaatgtggacagccca
acacaaatttcttgctctatgaccccaagtagtgatgcatccgatacaaaagaggtccgc
ttatcgaaattattggcagatatacaaacccgttcagattacaaacttaaggatcatagt
gtcaaaatccaagcagcactagaagatattagccaggttgttattaaacaaaatatatca
gttgcagaataccagaggagaatggaagaaaagtcagccctcgaatcaaaacttactgaa
ctcagatcacaagaaacagaattttgcagttttttgacgagagtcaaaaccaagctatcc
gaatctgtcatgagtgatgacttcgacacgattttaaccaatcatagtaaatcttttgga
atagaaagtcgtagattagattcagctttacctatatatgccagacgagctgacattgtg
gaatgtgtaaaaaacaaccaagtcacaattattcgtggagagactgggtctggaaaaagc
acacagatggtccagtatctttatgaaaatttaagcagcgataagatcattgtgtgtact
cagccacgaaaagtagcttgcataagcctagcaagcagagttgcagaagaactgttaatc
cctcttggtcaaggtgttgggtataaaactggaatgaaatacaaaacctctgataaaacg
aagatagtttttatgactgaccattccttgctcaatgagtgtcttaaagatcctttgttg
aagaaatattcatgtgttattattgatgaagcccatgaaagaagtatctataccgatctg
ttgcttgggattgtaaagaaatgccttccacagagaaatgacctcagagtgattatatcc
tcagccaccatagatattaaagtcttttcagattattttaaaggatcccaatcgatgcag
atagctggacgaactttccctgtggaagaagtttggttgtcagatgaagaacatgctaag
ttagatagttacatggatggggctgttaaattagctgcaaagattcacaaagaaaaacac
gaaggagatattttgatttttatgacaactccattagaaacggaaaaatgcaaagaatca
ctggagaaaattctgggactcacaaatgattacatatgtttgcctttacatggacaactc
catgcagacgaacaacaagctgtcttcaaaagtcttgcaaaaggaataagaaagatcgtc
ttcgctacaaatacggctgaaacttctataaccattcctggtgtgaaatttgtgattgat
acaggcttggctaaggagatgaactttgacgccaaaaggggcattaacacattgagcgtg
gaaaccattagcaaaagttcagctgaacaaagaaaaggccgtgcaggtagaacagccgca
ggaacatgctaccgactttatagccagaagagttatcaggatatgaaatcatcaaacata
ccagaaatattacgagttcatcttggtcaggttttgttgaagttattggaacttaatgtt
aatccgaacgaatgtgactttgtggagtcaccaaatccggaagccatggcgtctgcttta
cgaaatttggaggaactcaaagctatggatgaatataaaattacagagcaagggaaatgg
ctggctaaaattccatttgaaccacaattaggcactattgtgaagttaggttttgataat
ggactaatttatgatgctttggtcctaaccacactgataagttctggaagttacatcttt
tatcgaggaggatctgacgcagataaagataatttggatctactgaaaaccaaattctgt
gattccaggggtgactgtctcacgtttttgaacgtgtacaaggaatggataaatcaacca
gaaaacaagaaaagtaaatggtgcttcgataatggaatcaataacaaagcaattcgagga
gcaagagaaaccataacagaaataatgtcagtcctaaagaaagagcttaacattgaagtc
aaacgagaattttcaaatgatgaagaagctctagagattcttcagaaaataattactttg
tccttcagaaataacataagtcactatatcggccacaaaaacgctggatattttgtccct
acacttaaccaacaagtttatctccatccttcttcagttctgaagaccctgaataatact
agtgaatgggtcgtttacaccaatattcttcaaacatccaaatattttattaccacagta
actccagtgaaagaggagtggattttagaaatagcgaaggagaataaactcttcgatatt
gatgaagcaaaaaagaagaaaatttctaacatccatacagagtgtttcggaccaacttca
ttctctttctttgtaggaccgagatataccaaattacgaaagtatgaatcgattttaaca
gagaaatgttcatccattgttatgctagaagccgaccgagatcgtggcgagattagggta
ttttcttccaagtttacgttggatgccaaagcagccttggcacagtgggtaaatgaagca
aggaatgccatggtgagccgttccacagaatacagattggggacgaaagaaagtagatcc
ggaggcgttaggatagtgttaggttcaggtggtgagggaaaattaatacttatgcaaaac
gaataccgaacagtgtttattactaagccaaattctaaaacgacatcaaaagaaagaatt
attgagaaattttcaaaattcggagatatagccgattgttgggaagagaaacgctcgaat
caaagatggggaagggttaccttcacatctggaattgctgctattgctgcagtggaagga
actaaaactgatttcgatgaagtagctatcccagaatttaagttatcagaaaaccctgat
ggtttgtttaagaccagattaatttggtcaagacgtccttcaaaaggaatggcctttgta
gatgttgaactgttatgccttgctcaagcagttagtttaggaaggatcaatgttctgggt
gaactagcctcggtaagcttagatgccaaatctgctactagtttgtgtgtgcgtaagata
ccacttactgctacggagactgatgttcgtaacagtgtgtatgaagccatgggttacatt
acagaagaagatagacaaaatgtacatagagtaacggttgtcagagaaaaagcgttcacg
tctactccacacattttggaatctattagagcagaaatagaaaatagaatagtacaagtc
atcggttccaaagaatttacggtcgatattatgaagccaagaaaagatggagataccatt
tacaaagcccatgttaaattcagcagacctgatcatgggaagttggcgtgcacaagactg
aatggcattttgaatattgggggccaaattgtcgagatgactccagacatatcctcgtat
atgaacgtttctaggcatgtttacgatctcatgaaaggagcggtggaggaaacaatacag
gccatgaatttcttagaatttaaacaccatgttaggctattagataacgatcgtgtaatt
attaacttatactctacaaaaccagacgacctggcacgtgtgaagtctgtactagagggt
atacttaaaggagaagtcatcgaatgttggcgaaatgaaaattatcgacatctattctta
aaatcggggaggaaatttattcgtgatgtacaggagagaacgtccacgtatattcaggtc
gacgaaaggcaatataccatcagcatttacggaacagcagctaattttacatcagctcaa
actgaatttcagaatcatctaaatgaaatccttatgggcacgggtaaagaaatcgacctt
agagctccaggtcagcctaatggactaatgaagaacttaataaaggaatatggtatgaat
ttggaaaaattggtggatgaatgcaacttgaagtcagctttattggatcacaaaagacag
atggtgaagttgattggtgatccacaaaatattgaccaagctatttcggtgatattgatg
atgagtaagaatctgacaaagaaccaaaaacagacctcgacagtcgaggaggatttccca
gaatgctgtgcctgtttgtgtcctatagaagacactagccaactctacagactagaatat
tgtggccacgcttattgctttgattgtcttgggcgacaaataacagttgctattcagagt
aaggacctaccaattttatgtggggaagaggaatgtcaaaagccattggtttggaatgac
tttgtcaacagctttaaaaaagcccaagtaaacccacaggccttagtgggatctgcagtt
acaagattcatgatgaatgataaacatgatgcttaccgtcattgtttgacacctgattgc
ccaatgatttaccgggtaacaagtgagggtaatgtgttttcttgttacgaatgtggtata
cgaatttgcacaacctgtcacgtagagtaccatgatggactgtcttgtcagcaatacaag
gcaaatgtaatggacaaactacaagttgagatatatttaaaggagtatggtaacactacc
aaacattgccctgggtgtaagatccttattgagaagaactatggctgtaatcatatggtg
tgctcagcttgtaagatatcattttgttggttatgttccgccagctttgcatcatcaggg
ttgtgttatgatcatctaaataaagttcacggtggtataatgactgaagatgatttactt
tatgattaa
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