Patella vulgata (common limpet): 126823434
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Entry
126823434 CDS
T09576
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03022
Basal transcription factors
pvul03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126823434
09124 Replication and repair
03420 Nucleotide excision repair
126823434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvul03021
]
126823434
03400 DNA repair and recombination proteins [BR:
pvul03400
]
126823434
Transcription machinery [BR:
pvul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126823434
DNA repair and recombination proteins [BR:
pvul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126823434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
126823434
NCBI-ProteinID:
XP_050408236
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All DBs
Position
6:complement(27054334..27088702)
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AA seq
572 aa
AA seq
DB search
MSRSSEEVLLIVNHVRQRKTDGTLYMMGERLAWMPGGKDTFTISHLYADIKSQKISPDTK
EKVQLQLVFNDGGANTFHFNNPEGRPAMITDRDSVKEILQQLLPKFKRKISSELEEKNRI
LQDNPEIFQLYKDLVVSQVISAEEFWSTISNRLSNNSKAEAKQTVGVSPAFLADIKPQTD
GCNGLKYNLTADIIESIFKTYPMVKKKHAESVPHQLSESEFWTRFFQSHYFHRDRSNLSS
KDLFSDCAKNDEDEMKVEMSKKVCNPLMDLTLISDNSFGEEYRVLSEDTKKSSNAINLSM
IRRFNHHSTMVLKACENNSQTNSSCDNNGDSKSDNSIQGNGVESANSSNNNNINGHISDV
IASTSSSSAEDPPRKKKKIQEKLELVDLHNESKSDSVNLRLEKMERYLHGPTPITAVKYT
TSRAVLEASESVHNDVEQWSTDLSNILSGSSAVSVLGELSPGGVLMQGTSHQQLHQMIPK
EIQQEIQQQYSALCELLRHFWNCFPVSSKFLEEKVVKMRATLERFQLAKLNPLKDKLNEH
HYNINLMGHLEDMLMAAYSKFETWQLKKKSKR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgatcttctgaagaagtgctcttaattgtgaaccatgttcgtcaaagaaagact
gatggaacattgtatatgatgggagaaagattggcatggatgccaggtggcaaagatact
tttactatcagtcatttatatgcagatataaaatctcaaaagatatctccagacacaaaa
gaaaaggtccagttacagttggtgtttaatgatggtggtgccaatacttttcatttcaac
aatccagaaggtcgaccagctatgataacagatcgtgacagtgttaaagaaatccttcaa
caacttttacccaagtttaaacgtaaaatcagcagtgagttggaagagaaaaatagaata
ttacaagataatcctgaaatatttcaactgtacaaagatttagttgttagtcaagtgata
tcagcagaagaattctggtcgacaatctcaaatagattatcaaataacagtaaagcagaa
gctaaacaaaccgtaggagtttcaccagcatttttggctgacatcaagccccagacagat
ggttgtaatggtttaaaatataatctcactgctgatataatagaatctatttttaaaaca
tatcctatggttaaaaagaaacatgccgagtctgtaccccatcaactatcagagagtgaa
ttttggacacggtttttccagtcacattattttcacagagatagaagtaacctgagcagt
aaagatttattctctgattgtgctaaaaatgatgaagacgaaatgaaagtagaaatgtca
aaaaaagtatgcaatccattgatggacttgactttaatatctgataattcttttggagag
gaatatagagttctatcagaagatacaaaaaaatcatcaaatgcaattaatttatcaatg
attcgtcgattcaaccatcattctactatggtgcttaaagcttgtgaaaacaattctcaa
acaaattcatcttgtgataacaatggtgatagtaaaagtgacaattccatacagggtaat
ggtgttgaaagtgctaatagtagtaacaataataatataaatggacacatatctgatgtt
attgcgtctactagttcaagttctgcagaggatcccccaagaaaaaagaaaaaaatccag
gaaaaattagaattggtagatttacataatgaatctaagtctgattcagtgaatttaaga
ttggaaaaaatggagcggtatcttcatggtccaactcctattacagcagtgaaatataca
acaagcagagctgtactagaggcgtcagagtctgtacataatgatgtagaacagtggtca
acagatctgtccaatatattatcagggagtagtgctgttagtgttttaggagaattgtca
ccaggtggggtacttatgcaaggtaccagtcatcaacaattacatcaaatgatacctaaa
gaaattcaacaagagatacaacaacagtattctgccttatgtgaacttttgcgtcatttt
tggaactgctttcctgtttcctcaaaatttttagaagaaaaggtggtgaaaatgagagca
accttagaaagatttcaactcgctaaattaaatccattaaaagataaactcaacgaacat
cattataatataaatttaatgggtcatctagaagatatgttaatggctgcttattctaaa
tttgaaacgtggcagttgaaaaagaaatcaaagagatga
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