| Entry |
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| Name |
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
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| KO |
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| Organism |
pvul Patella vulgata (common limpet)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pvul00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126824209
09124 Replication and repair
03420 Nucleotide excision repair
126824209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pvul03021]
126824209
03400 DNA repair and recombination proteins [BR:pvul03400]
126824209
Enzymes [BR:pvul01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126824209
Transcription machinery [BR:pvul03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126824209
DNA repair and recombination proteins [BR:pvul03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126824209
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(82470409..82474121)
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| AA seq |
791 aa
MGKRDRKDKEERKSKKLKPEEVVYDEEDTTLDNVDVKDGVPESATRHVEDDAAEDEFGAK
DFRKALDLKPDHNSRPLFIGPNGHIFLESFSPVYKHAHDFLIAISEPVCRPEHIHEYKLT
PYSLYAAVSVGLQTNDIIEYLRRLCKTTLPNGIIEFIKLCTLSYGKVKLVLKHNRYFVES
QHPEVLQKLLKDPGIQEWRKRAEVDENGDPQFIAGELSGKSALHLNKPVRDPNQAETSTA
GEGTATTEDGQPVPDDITAFYDKIDNEEEDEDEAQLKTVSFEVKQENIEDIQKRCIELEY
PLLAEYDFRNDTINADVNMDLKPSTVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLV
GVTAACTVRKRCLALCTSGVAVEQWRSQFKMWSTVDDSLICRFTSDAKDKPMGCAICIST
YSMLAHSTKRSWEAEKMMEWLQGQEWGIMLLDEVQTIPAKMFRRVLTIVNAHCKLGLTAT
LVREDDKIADLNFLIGPKLYEANWMELQNNGFIAKVQCAEVWCPMTPEFYREYLQMKSMK
KLLLYAMNPNKFQACQFLIRYHERRNDKIIVFADNVFALKHYAVTLNKPYLYGPTSQGER
LQILQNFQHNPKVNTIFVSKVADTSFDLPEANVLIQISAHGGSRRQEAQRLGRILRAKKG
AAAEEYNAFFYSLVSQDTMEMQYSLKRQRFLVNQGYSYKVITKLAGMEDENLAYVSKEDQ
VRLLEKVLQATDADAEEERTVGDGSQMRPNMSRKVGSMSSMSGADDAIYMEYRKKKGSKE
SSHPLFKRFRR |
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| NT seq |
2376 nt +upstreamnt +downstreamnt
atggggaaacgtgatagaaaagataaggaggagagaaaatctaagaaattaaaacctgaa
gaggttgtatacgatgaagaagatacaactctagacaatgttgatgtcaaagatggtgtg
ccagagtccgccacaagacatgttgaagacgacgcagccgaggatgaatttggtgccaaa
gatttccgaaaagctctcgacttgaaaccagaccacaattctcgacctctgtttattggc
cctaatggtcatatatttctggaatcattctcgcccgtctataagcatgcccatgatttc
ttgatagccatatcggaacctgtatgtcgacctgaacatatccatgaatataagctgacc
ccctattctctgtatgcagccgtttcggttggtctacaaacaaatgatattattgagtat
ttacgtaggttgtgtaaaacgacgctaccaaatggaataatagaatttatcaaactgtgt
acattgagctatggcaaagtgaaactagttttaaagcacaatcgctattttgtcgagagc
caacatcccgaagttctccagaaattattgaaagatcctggaattcaggaatggagaaaa
cgtgccgaagttgacgagaatggagatccacaattcattgctggagaactgtctggtaaa
tcagctctacatttaaataaacctgtgcgagatccaaatcaagccgaaacaagcacggca
ggtgaaggaacagctaccactgaagacggtcaaccagttccagatgatattactgcattt
tatgataagattgataatgaagaagaagatgaggatgaagcccagctgaaaacggtttcg
tttgaagtgaagcaagaaaatatcgaagatatacagaaacgttgtattgaacttgagtac
ccacttctagcggaatacgacttccgcaatgacactattaatgccgacgttaatatggat
ctgaaaccgtcaactgttttacgtccctatcaggagaagagtttacgtaaaatgtttggt
aatggtcgtgctcgatctggggttattgtgttaccatgtggggctgggaaaactcttgtg
ggcgtgacagcagcttgtactgttagaaaacgttgtttagccttgtgtacgtctggtgtg
gctgttgaacaatggaggtcacaatttaaaatgtggtcgacggtggacgatagtctgatt
tgtaggtttacgtctgacgctaaagacaaaccaatggggtgtgcgatctgtattagtact
tactccatgttggcacattcgacaaaacgatcatgggaggcagaaaaaatgatggaatgg
ctgcaaggtcaggaatggggtattatgctattagatgaagtacaaacaattcctgctaaa
atgttccgtcgggttctgactattgttaatgctcattgtaaattaggtctgacagccact
ctggtccgagaggatgacaaaattgctgatctgaattttttaatcggacccaaactgtat
gaagccaattggatggaactacagaataatggtttcattgctaaagttcagtgtgccgaa
gtctggtgtcccatgacccctgagttttatcgagaatatctccaaatgaaatcgatgaag
aaacttttgttgtacgccatgaatcccaataaatttcaagcctgtcagtttctgattcga
taccacgaacgacgtaatgataaaatcattgtgtttgccgataatgtgttcgctctgaaa
cattatgcagtaacattaaacaagccttatttatatggaccaaccagtcagggagaacgg
cttcaaattctccaaaatttccaacataatccaaaagtcaacaccatctttgtgtcaaag
gtagccgacacatcttttgatttaccagaagcgaatgtgttgattcaaatatcggctcac
ggtggttccagaagacaagaagcccagcgccttggtcgaattctccgtgctaagaaagga
gcagcagcagaggaatataatgcatttttctattcattggtttcccaggacacgatggag
atgcagtactctttaaaaagacaaagatttttggtaaatcaaggttacagttacaaggtt
attacaaagttagcaggaatggaagacgaaaatctggcgtatgtcagtaaagaagatcag
gttcgtctgttagagaaagtattacaagctacagatgctgatgctgaagaggagagaact
gttggtgatggatcacagatgagacccaacatgtcgcgtaaagttggcagtatgagtagt
atgtccggcgcagatgatgctatttatatggagtataggaagaaaaagggaagtaaagag
agttctcaccccttatttaaaagatttagacgctag |
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