Patella vulgata (common limpet): 126824281
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Entry
126824281 CDS
T09576
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pvul
Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvul03021
]
126824281
03036 Chromosome and associated proteins [BR:
pvul03036
]
126824281
Transcription machinery [BR:
pvul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126824281
Chromosome and associated proteins [BR:
pvul03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
126824281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
HHH_9
SH2
HHH_3
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
126824281
NCBI-ProteinID:
XP_050409437
LinkDB
All DBs
Position
6:17433503..17466979
Genome browser
AA seq
1623 aa
AA seq
DB search
MSDFLENEAEESERSSSEEDDEVVGTKKSKSVVKKKSKGRIDDDDDDDDEEEIDEALIEE
EMKDFINEDVEEDDEEGSEDGGDEGKRKHEDSDIDDQLEDDDYDLLEENLGIKVKRKQKR
KRIRVMSEDEDSDKEGDETGTDGKQTIEDQLFEGLEEEGDDDVRSVAPAREAPDTNDFGD
LDEEEESDIDDFIVDDEGRPISKGKKKKHIIHSDRALQEAQDIFGVDFDIEEFADYDEEE
EDDMDEEYEDEELDVDGVARPRTKKSGRARRTKKSIYDVFEPSELERGHFTDLDNEIKTA
DMPERFQLRQVPVLTAEEDELEEEAEWIYKQAFCTKSVSTQTLLEQEQGNQFNFDRRKGP
EMVNKIRKAIDFMRNQRLEVPFIAFYRKEYVEPELNITDLWRVWNWDEKWTQLATRKKNL
IRLFEKMQNFQFEQNSDIDKVLASSFRPLTEDDLEKVRKVQTIDELRDVYQHFLLYYGTE
IPKMRNAEKKKQAERDGGEKTGDDDHQDTIKQATRKSGYSICQDAKLDEVARRFGLTPEQ
FGENLRDNYQRHDVEQCPVEPLDLSKDYICGQFPTEEDALMGARHMVAMQISHDPLVRKS
VRQTFEERAKIKVTPTKKGLKEIDEAHSCYPMKYIKNKPVKDLKDDQYLKLHMAEEEGLL
KISIMIDDDGLTSSTYFEEVRQLYYRDEFSHLVQQWNTQRSEALKRALTKIVYPQIEKEL
RLKLLQESKEGILKACCRKLYSWLKVSPYQCDQQLYDDEDYSDSNGIRVMGIAYSMEMIN
NKDPSSFCALIDGDGEVTDYLRLTSLTVRRNSYRQQEREAKVGLYMLPKEKDMEKIKDFI
SNKKPHVICVTVESREATMIVEDLKKIIAELEQEEQLPPISVELMDNELAMVYENTSKAA
NDFREYPPVLRHAISIARRLQDPLIEFAQMCNPDDDIMCLKYHTLQNELNKDELKEALYL
EFINRVNEVGVDVNRALAHPHTACLTQFICGLGPRKGSQLLKILKQNNSRLENRTQLVSL
CHMGPKVFINCAGFIKIDTNSLGHSTDTFVDALDGSRVHPEAYEWARKMAVDALEYDDTS
EDANPAGALEEILERPESLKELDLNAFAVELERQGYGDKRITLYDIRAELNHRYKDLRSP
YRPPSVEERFNMITKETPETFYVGKLIMVWSHFDAGNCPGAAMGVKCRLDNTVTGFIPTK
MISDKKVTNPEERVQKDLYYDFDKEKEETEKEEDKKKQKARQTYIKRVIVHPSFHNISYS
ECEKLMANMDQGDVIIRPSSKGADHLTVTWKVTDGILQHIDVREEGKENAFSLGRSLVIG
NEEFEDLDEIIARHVQPMAALARDIIGFRYYRDSEGGKRDILEKTLMVEKRKAPSRIPYF
LSSSKQFPGTPMSMRTPSRTPARTPARTPSNVRTPATGRTPGARTPMAAYTPSMNIQGVD
PATIQRAAAGLSSNIYNTLAQVASATPQQVGSNRNFTSGFSAGNFNYQPAVTPMMTPMMT
PSYHGNQISQQTPSQQPVTPAQQSQQPSQQQPFTPSYNPTPRSNAWPGMTTPRTPAQSQP
TPSAQQRPLPGTSKAGTDWAKAAEMWAKRKPTTPRAQSSRVQGSPQSDGSSPRGDGTPLI
DER
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttttggaaaatgaagctgaggaatcagagagaagtagttcagaggaagat
gatgaagttgtaggaaccaaaaagtctaaatcagttgtaaaaaagaaaagtaaaggacgt
attgatgatgatgacgatgatgatgatgaagaagaaattgatgaggcacttattgaagaa
gaaatgaaagattttattaatgaggatgtagaagaagatgatgaagaaggaagtgaagat
ggtggggatgaaggaaagagaaaacacgaagattcagatattgatgatcaacttgaagat
gatgattatgatctgctggaagaaaatctgggtataaaagtgaaaagaaagcaaaaacgt
aaacgtattcgtgtgatgtctgaagatgaagatagtgataaagaaggagatgaaacaggt
actgatggtaaacaaactatagaagatcagttatttgagggtttagaagaagaaggtgat
gatgatgttagatctgtagcacctgccagagaagcaccagatacaaatgattttggtgat
ttggatgaagaagaagaatcagatatagatgatttcattgttgatgatgaaggaagaccg
atcagtaaaggaaagaagaaaaaacatatcattcacagtgatagggctctacaggaagct
caggatatatttggtgtagattttgatattgaagagtttgctgactatgatgaggaggag
gaagatgatatggatgaagagtatgaagatgaagaactagatgttgatggtgtagccagg
ccaagaactaaaaaaagtggccgagccagaagaactaagaaaagtatttatgatgtattt
gaaccaagtgagttggaaagaggacattttacagatcttgataatgaaattaaaacagct
gatatgcctgaaagatttcagttacgtcaagtaccagttttaacagcagaagaagatgaa
ttagaagaagaagctgaatggatttataaacaagctttctgtaccaaatctgtgtccaca
caaacattactagaacaagaacagggaaatcagtttaattttgacaggagaaaaggtcca
gaaatggtgaataaaatcagaaaagctattgacttcatgagaaaccaacgactagaggta
ccatttatagccttctatcgtaaagaatatgtagagccagaattaaacatcacagattta
tggagagtgtggaactgggatgaaaagtggacacagttagctacaagaaagaagaacctg
atccgactgtttgaaaaaatgcagaattttcaatttgaacagaattctgatatcgacaaa
gttttggcttcatctttcagaccattaacagaggatgatctagaaaaggtgcgtaaagtt
caaacaattgatgaactacgggatgtgtatcaacacttcttgttgtactatggtacagaa
atacctaagatgagaaatgcagagaagaagaaacaagctgaacgagacgggggagagaaa
acaggagatgatgaccatcaagatacaatcaaacaagcgacaagaaaaagtggttattct
atctgtcaagatgctaaactagatgaggtagctagaaggtttggtttaacaccagagcaa
tttggtgagaatctacgagataattatcagagacatgatgtagaacaatgtccggttgaa
cctcttgatctatcaaaagattatatctgtggacagttccctacagaagaagatgcttta
atgggggctcgacatatggttgccatgcagatttcccatgatcctctggtgcgtaaatca
gtaagacagacatttgaagaaagggctaaaataaaggtcacacctaccaaaaaaggactt
aaggaaattgatgaagcacacagttgttacccgatgaaatatataaaaaataaacccgtt
aaagatttaaaagatgatcagtatttaaaattacacatggctgaagaagaaggtttacta
aaaatatctattatgatagatgacgatggtcttacatcatcaacgtatttcgaagaagtt
cgacaattatattatagggatgaattcagtcatctggtacaacagtggaatacacagaga
agtgaagctttaaaacgagccttaactaaaatagtatacccacagattgagaaagaatta
cgcttgaaattattacaagaatctaaagaaggcatattaaaggcatgttgtcgtaaactg
tatagttggttaaaagtttctccatatcaatgtgatcaacagttatatgatgatgaagat
tatagtgattccaatggtataagagtaatgggcattgcctactcaatggaaatgataaat
aataaagatccttcatcgttttgtgctttaattgatggagatggggaagtgactgattat
ttacgtttaacaagtttaacagtcagacgtaattcgtatagacaacaagaaagagaagca
aaggtaggtctctatatgttgccaaaggaaaaagatatggaaaaaattaaagactttata
tctaacaagaaacctcacgttatttgtgtgactgtagaatcaagagaagcgacgatgatt
gttgaagatttaaagaagataatagcggagttagaacaggaagaacaattaccccctatc
agtgtagaattaatggacaacgaactagccatggtctatgaaaatacaagtaaagctgct
aatgatttccgtgaatatccccctgtactacgccatgctatatctatagccagacgtcta
caggatccattaatagagtttgctcagatgtgtaatcctgatgatgatatcatgtgcctt
aaatatcatactctacagaatgagttaaataaagatgaattaaaagaagcattatattta
gagtttataaatcgtgttaatgaagttggtgttgatgttaatagagctttagctcatcca
cataccgcctgtttaacacaatttatctgtggtcttggacctagaaaaggttcacagcta
ttaaagatattaaaacagaacaatagtagactagagaacagaacacaacttgtatcttta
tgtcatatgggaccaaaagtatttattaattgtgctggttttataaagatagacaccaac
agtctaggtcacagcactgacacgtttgttgatgcattagatggatctcgagttcaccct
gaagcttatgaatgggccaggaaaatggctgttgatgctttagaatatgacgatacttca
gaagatgccaatccagcaggagctctagaggagattttagagagaccagaaagtttaaaa
gaattggatttaaatgcgtttgctgtggagttagagagacagggttatggagataaaaga
attacgttatatgatataagagctgagttaaatcaccgatataaagatttacgtagtcca
tatagaccaccttctgtagaagaacgttttaatatgataactaaagaaactcctgaaaca
ttctatgttggtaagttaataatggtttggagtcattttgatgctggtaattgtcctgga
gctgctatgggtgttaaatgtcgattagataatacagttactggttttataccaactaaa
atgatcagtgataaaaaagttacaaatcctgaagaaagagttcagaaagatctatattat
gattttgataaagaaaaagaagaaacggaaaaagaagaagataagaaaaaacaaaaggcc
agacagacttatattaaacgggttattgtacatccatctttccataatatcagttattct
gaatgtgagaagttaatggctaacatggaccaaggagatgttattattcgacccagcagt
aagggagccgatcatttaacagtaacatggaaagtaacagatggtattttacaacatata
gatgttagagaagaaggaaaagaaaatgccttcagtttagggagatctttagttattgga
aatgaggaatttgaagatttagatgaaattatagctcgacatgtccagccaatggcagcc
ttagctagagacataataggttttagatattatcgggattcggaaggtggtaaacgtgat
atcctggaaaaaactttaatggttgaaaagaggaaagctccgtcaaggatcccatatttc
ctgagttcttccaaacagtttcctggtacacccatgagtatgagaacaccatcaagaaca
cctgcacgaacaccagcacgaacaccatctaatgtaagaacaccagccactggtagaaca
cctggtgctagaacacccatggcagcctacacacctagtatgaatattcaaggtgttgat
ccagctaccatacagagagcagctgcaggattatcatctaatatatataatactctagct
caggtagctagtgctacaccacaacaagttggttccaatagaaactttacatcaggcttt
tctgctggtaactttaattatcagcctgcagtgacgcctatgatgacaccaatgatgacg
ccaagttaccatggcaatcaaatctctcaacaaacacctagtcaacaaccagtaacacca
gcacaacaatctcaacagccatcacaacaacagccttttacaccttcttataatcctaca
ccgcgttctaacgcctggcctggcatgaccacccctagaacaccagcacaaagtcagccc
acaccatcagcccagcaacgacccctacctggtaccagtaaggctggaactgattgggcc
aaggcagcagagatgtgggccaagagaaaaccaacgacgcctagagctcaaagttcgcga
gttcaaggttcacctcaatctgacggtagctctccccgtggtgatggtacacctttaatt
gatgaaaggtga
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integrated database retrieval system
