Patella vulgata (common limpet): 126824471
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Entry
126824471 CDS
T09576
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03030
DNA replication
pvul03420
Nucleotide excision repair
pvul03430
Mismatch repair
pvul03440
Homologous recombination
pvul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126824471
03420 Nucleotide excision repair
126824471
03430 Mismatch repair
126824471
03440 Homologous recombination
126824471
03460 Fanconi anemia pathway
126824471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvul03000
]
126824471
03032 DNA replication proteins [BR:
pvul03032
]
126824471
03400 DNA repair and recombination proteins [BR:
pvul03400
]
126824471
Transcription factors [BR:
pvul03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126824471
DNA replication proteins [BR:
pvul03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
126824471
DNA repair and recombination proteins [BR:
pvul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
126824471
MMR (mismatch excision repair)
126824471
DSBR (double strand breaks repair)
HR (homologous recombination)
126824471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REPA_OB_2
Rep-A_N
MTP18
tRNA_anti-codon
DUF223
Rep_fac-A_C
DUF2956
Motif
Other DBs
NCBI-GeneID:
126824471
NCBI-ProteinID:
XP_055957769
LinkDB
All DBs
Position
6:complement(64212609..64240621)
Genome browser
AA seq
654 aa
AA seq
DB search
MTAKLSNGSIEAIIKGGSPDKPVLQVISFKKISAGGSADRYRLLLSDGELTYSHAMLATQ
LNNYMEDGLIDNLCVIQVERYLCNTIQNDRRIMILLDVNVLQPGSQVGVRIGNPQQYKAS
AADGGQVNGHDNTNNSNHMKAETTAQPINKPLNNSSNGPMATNNNKPGYSIKGGGAATAS
PSTSRVHSISSLTPYQNRWRIRARITQKSSVKTWSNSRGEGKLFSVNFLDESGEIRATGF
NDAVDKFYDMLEVNKVYYVSRATLKTANKQYSSVNNDYEMTFNPDTNIEVCEEETDLPSM
TFDFVQISDLEKHQPNSMIDIIGVVSKCGDIGSVVGRQSQKEITKRDITLVDQSGVGVNL
TLWGNDAQQFSGDGNPVIAVKGARLSDYGGRSLSVLASSQMIMNPDIRESHFLRGWYDRE
GQSMNFDKFASDGPGSSGAGGATNWKTFSQVKSENLGQSGKADFFTSKATIVYLKKENCM
YQACPTDHCYNNGTDIFRDSLVRYLGYTNEVGEAFRSQVPVRLVYLSYGVASCYVVADAI
HKGYAQYKKKHKTKKEKFERVSIATGDCLIWQGFASVAIPGFTINRLCTYLGVALKRGTR
FSPPVRHWTTTIIGLICIPFIVKPIDNAVEYSMNKTLRKFYSTDEQSSASNLDS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaaacttagtaacggctcgattgaggctattattaagggaggatctccagat
aagccagttcttcaagttattagttttaagaagatatcagcaggtggatcagctgataga
tatagattattattatcagatggagaactcacatattcacatgccatgttggcaacccag
ttaaataattatatggaagatggtttaatagataatctgtgtgtgattcaagttgaacga
tatctctgtaatacaatacaaaatgacagacgtataatgatattactggatgtaaatgtt
ttacaacctggttcacaagttggtgttagaattggtaatccacaacagtataaagcatct
gctgctgatggtggtcaagtgaatggtcatgataatactaataatagtaaccacatgaag
gcagaaactactgcacaaccaatcaataaaccactaaacaacagtagtaatggacccatg
gctaccaataacaataaacctggttacagtataaaagggggaggggctgctacagccagt
ccatctacatccagagtacattcaatcagcagtctgacaccatatcaaaacagatggcga
atcagagcacgaataacccagaaatcatctgttaaaacctggagtaattcacgtggagag
ggtaaactcttcagtgttaattttcttgatgaatctggagaaatacgagcaacgggattt
aatgatgctgttgacaaattttacgatatgttagaagtcaataaggtatattatgttagt
cgagccactctgaagacagccaacaaacaatattcatcagtgaataatgattatgaaatg
acctttaaccctgatactaatatagaggtatgtgaggaggaaactgatctaccgagcatg
acctttgattttgtccaaatatcagatttagaaaaacatcaaccaaacagtatgatagat
ataattggagttgtgagtaaatgtggtgatattggttccgttgttggtcgtcagagtcag
aaagaaataacaaaacgtgatataactttagttgaccaatcaggtgttggtgttaatctc
acattgtggggtaacgatgctcaacagtttagtggagatggtaatcctgttatagctgta
aaaggtgccagattatcagattatggtggtcgatcgttgtcagtgttagccagtagtcag
atgataatgaatccagatataagagaaagtcatttcttgcgtggttggtacgatcgagaa
ggacagagtatgaactttgataaatttgccagtgatgggccgggatcgagtggagcaggt
ggcgctacaaattggaagacgtttagccaagtgaagagtgaaaatttgggacaatcgggt
aaagctgatttctttacatctaaagccaccattgtttacctaaagaaagaaaactgtatg
taccaggcatgtccaacagaccattgttataataatggcaccgacatatttagagattcc
ctggtcagatatctgggttatactaatgaagtaggtgaagcgtttagatctcaggttcca
gttcgattggtgtatttaagttatggtgtagccagctgttatgttgtagcagatgctatt
cataaaggatatgctcagtacaagaaaaaacacaaaaccaaaaaagaaaagtttgaaaga
gtttccatagcaaccggtgattgcttgatatggcaggggtttgcgtctgttgctatccca
ggattcaccataaacagactctgtacatatttgggagttgcattgaagcggggtacaaga
ttttcaccaccagtacgccactggaccacaacaataattggcttaatctgcattccattt
attgtgaagcctatcgataatgcagtggaatactccatgaataaaactcttagaaaattc
tactcaactgacgaacaatcatcagcttctaaccttgattcttga
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