Patella vulgata (common limpet): 126824488
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Entry
126824488 CDS
T09576
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126824488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126824488
Enzymes [BR:
pvul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
126824488
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126824488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
DALR_1
TraC
Motif
Other DBs
NCBI-GeneID:
126824488
NCBI-ProteinID:
XP_050409679
LinkDB
All DBs
Position
6:66401001..66417532
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AA seq
354 aa
AA seq
DB search
MCEVLKSNFETLFPLIENAIKQCEFVALDTEFTGLQFDESCKASLFDTSEGRYLKLRRSF
TQFTICQIGLSAFVNIKDNKYEAHTFNLYLFPHAFGPSDVRFMIQASSISFLTKHNFDFN
KFVYEGVPYLNMEEELKLKEHISRKTMFSGLEREVDEEEIQCICSEIAEWFVRSKKHEIY
KVENNSDTNKTNAYLLHTEIRTRFPDVWTHTDEADNIIVEHVTSSRRSELEDLDLDTRKQ
EEQKLVQAMLGFTRVFRLLQDYQKPIVGHNMLSDLMLVFDKFYKPLPEKFCDFKKELNTV
LPRIYDTKHITFSAKKGLADHVVLDKTSLRKIYQILNSKEASEAVLFSLFILFI
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagttttaaaatctaattttgaaacccttttcccattaatagaaaatgcaata
aagcaatgcgaatttgtagcactagatacagaatttactggtctacagtttgatgaatca
tgtaaagcaagtttgtttgatacaagcgaaggcagatatttaaaattaaggagaagtttt
acacagtttactatctgtcaaataggtctgtcagcttttgtaaatatcaaagacaataag
tatgaagcccacacctttaacctttatctcttcccacatgcttttggacccagtgatgtt
agatttatgattcaggcatcaagtatttctttcttgaccaaacataattttgattttaac
aagtttgtatatgaaggagtgccatatttgaatatggaggaggagttaaaattaaaagag
catatttcaagaaagaccatgttttcaggtttagaaagagaagtagatgaagaagaaata
caatgtatatgttctgagatcgctgaatggtttgttagaagtaaaaaacatgaaatatat
aaagttgaaaataattcagatacaaataagacaaatgcttatctgttgcatacagaaatt
agaaccagatttcctgatgtctggacacatacagatgaggctgataatattattgttgaa
catgttacatcaagtcgaagaagtgaattagaagatttagatttagacaccagaaaacaa
gaagaacaaaaacttgtacaggcgatgttgggattcacacgagtgttcagattacttcaa
gattatcagaagcctattgtaggacacaatatgttatcagatctgatgttagtttttgat
aaattctacaaaccacttccagaaaaattctgtgattttaagaaagaacttaacacagtt
ttgccaagaatatacgacactaaacatataaccttttcagctaaaaagggtctggctgat
catgttgttttagataaaacatcgttaaggaaaatttaccagatcttaaacagtaaagaa
gcatccgaggcagttttattttcactgtttattttatttatctag
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