Patella vulgata (common limpet): 126824900
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Entry
126824900 CDS
T09576
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03440
Homologous recombination
pvul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126824900
03460 Fanconi anemia pathway
126824900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvul03032
]
126824900
03400 DNA repair and recombination proteins [BR:
pvul03400
]
126824900
Enzymes [BR:
pvul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
126824900
DNA replication proteins [BR:
pvul03032
]
Eukaryotic type
DNA Topoisomerases
126824900
DNA repair and recombination proteins [BR:
pvul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
126824900
FA (Fanconi anemia) pathway
126824900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
126824900
NCBI-ProteinID:
XP_050410284
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Position
6:complement(58147801..58183678)
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AA seq
864 aa
AA seq
DB search
MRTVLMVAEKPSLAQSLAKILSNGSCISRKGSNGACSIHEYRGKFNGENVTFKMTSVCGH
VMGCDFVGKYNSWDKVDPAELFTAPIQKKEASPNLHMPNFLRREAQGADYLVLWLDCDKE
GENICFEVMECTIGAMNRVQGQQVYRARFSAITDTDIKRAMQNLVSPNKNEAQSVDARQE
LDLRIGCAFTRYQTKFFQGKYGDLDSTLISYGPCQTPTLGFCVERHDKIQSFKPEPFWVI
DVQITHPGGKSLKLEWERVRLFDKEIALMFLNMIKGSEEARVVTTTQKEKTKARPIALNT
VELLRVASSGLGIGPHHTMQVAERLYTQGYISYPRTETTQYPENFDLKGTLRQQQSSPNW
GDLVTKLLNEGIQKPKKGSDAGDHPPITPMKLARESDFDHDSWRIYDYITRHFIGTLSPD
CRYLQTTVHFEIGLEKFSTSGNRLLDAGYTAVMPWQALSSDEEMPQFTREQIIPLDHAKL
VERQTSPPDYLTEAELISLMEKNGIGTDASIPVHINNICERNYVNIIPGRKLKPTPLGIV
LVHGYQKIDSDLVLCTMRSSIEQQLNLIALGKANFYDVKQHAIDIFHRKFKYFVENIQGM
DQLFEVTFSPLAAIGKPLSRCGKCRRFMKFIQAKPSRLHCPNCDETFSLPQNGNIKLYKE
LKCPLDEFELVLWTTGTKGKTYQLCPYCYNNPPFNDMRKGMGCNECTHPTCPHSFSKNGV
SECVECDRGILVIDQSSGPKWRMACNKCNVVIHFLEHATKISVNEETCDCGSNLVDATFP
KGKSKLPEGAEEHTGCVFCDPALKPLMEKHHASNFFQNKASRGGASRGRGGGRGRGGRGR
GRGGRGRGRGKPKDKMSQLAAYFV
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgtgcttatggtggcagaaaagccatctttagcccagtcactagcgaaaatt
ctgtcaaatggaagttgcataagtagaaaaggttcaaatggagcttgttcaattcacgaa
tacagaggaaaattcaacggagaaaacgttaccttcaaaatgacgtctgtgtgtggtcat
gtcatgggttgtgattttgttggcaaatataacagctgggataaagttgaccctgcagaa
ctgtttactgctccaattcagaaaaaagaagcttcaccaaatttacacatgccaaacttt
ttaaggagagaggcacaaggtgcagattatttagtattatggttagattgtgataaagaa
ggtgagaatatttgttttgaagtcatggaatgtactataggtgctatgaacagagttcaa
ggtcagcaagtatatcgagcacgattcagtgctataacagatacagatataaaacgtgcc
atgcagaatctggtatcccctaataaaaatgaagcccagtctgtagatgccagacaagaa
ttagatttaagaattggatgtgcttttactagatatcaaacaaaattctttcagggtaaa
tatggtgatttagatagtacattaatatcatatggtccatgtcagaccccaactttaggt
ttttgtgtagaaagacatgataaaatacaatcatttaaaccagaaccattttgggttata
gatgtacagataactcatcctggtggcaagtcattaaaattagaatgggagagagttcga
ttatttgataaagaaatagctctcatgtttttaaatatgatcaaaggtagtgaagaagcc
agagtcgtaaccacaacacagaaagaaaaaacaaaagcacgaccaatagctttaaataca
gtagaattactgcgagtagctagttcgggtttaggtattggaccacatcatactatgcag
gtagcagaaaggctttatacacaaggctacataagttaccctagaacggaaactacacaa
tatcctgaaaactttgatctaaaaggaaccttgcgtcaacaacaatctagtccaaactgg
ggagatttagtcactaaattacttaatgaaggcatccaaaaaccaaagaaagggtcagat
gctggtgatcatccacctattacaccaatgaagttggccagagaaagcgatttcgatcat
gattcatggagaatatatgattatattaccagacattttattggaaccttatcaccagat
tgccgatatctacagaccactgtacattttgagattggtttagagaagttttctacgagt
ggtaatcgtctgttagatgcaggctatacagccgtcatgccatggcaagcgttaagtagt
gatgaagaaatgccacaatttacacgggaacaaattataccattagatcatgctaaactt
gtagaaagacaaacatctcccccggattatttaacagaagcagaacttatttcactgatg
gagaagaatggaatcggtactgatgctagtatacctgttcatatcaataatatctgtgag
cggaattacgtcaacatcatacccggtcggaaactaaaacctacacctcttggcatcgtc
ttggtacatggctatcagaagattgattctgatttagttctgtgtacaatgcgatcatca
atagaacaacagttaaatcttatagcgttaggtaaagcaaacttctacgatgtcaagcaa
cacgctatcgacatatttcatagaaaatttaaatattttgttgagaatattcagggaatg
gaccaactgtttgaagtaacattttcgcctctagcagccattggtaaaccattgtctcga
tgtggtaaatgtagaagatttatgaaatttattcaagctaaaccaagtcgtcttcattgc
cccaactgtgatgaaacattctcccttccacaaaatggtaacattaagttatataaagaa
ttaaaatgtccattagatgaatttgaattggtgttgtggacaactggtactaagggaaag
acgtatcaactgtgtccttactgttacaacaatccaccgtttaatgatatgaggaaagga
atgggatgtaacgagtgtacgcatccaacatgtccgcatagtttcagtaaaaatggtgtc
tcagaatgtgtggagtgtgatcgtggcattctagttatagaccaatcttcgggtccaaaa
tggaggatggcttgtaacaagtgtaatgttgttatacattttctagaacatgcaactaaa
atcagtgttaatgaagagacatgtgattgtggctctaatctagtcgatgctactttcccc
aaggggaagtcaaaattaccagaaggtgcagaagaacatactggctgtgttttctgtgat
ccagctctcaaaccactgatggaaaaacatcacgccagtaacttcttccaaaacaaagca
tctcgtggaggggcttcaaggggacggggaggggggagaggtaggggaggaagaggacga
ggtcgcggtggaagagggaggggaagaggaaaaccaaaagacaaaatgtctcagttggca
gcctattttgtttag
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