KEGG   Patella vulgata (common limpet): 126825302
Entry
126825302         CDS       T09576                                 
Name
(RefSeq) uncharacterized protein LOC126825302
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126825302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvul03041]
    126825302
Enzymes [BR:pvul01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     126825302
Spliceosome [BR:pvul03041]
 Complex C
  Other components
   Step II factors
    126825302
SSDB
Motif
Pfam: KH_DEAH11 OB_NTP_bind Helicase_C IBR IBR_1 DEAD IBR_2 AAA_22 RRM_1 RRM_Nup35 KH_PARP14_8 RRM_DEAH11 nSTAND3 SLFN-g3_helicase RBD_DEAH11 ATPase KH_SLS1_1 AAA_19 T2SSE GFD1 ResIII ABC_tran Helicase_RecD Baculo_PEP_C
Other DBs
NCBI-GeneID: 126825302
NCBI-ProteinID: XP_050410843
LinkDB
Position
6:11337144..11352201
AA seq 2153 aa
MSKPKEGHSATPTTTMVGDSSRGRQRGNGFYLYIIFRQVSGRDLNCEQFLKHEVERNNFQ
GLEIIDSSRCGKDEVFKIKLPSISTVTRIMPRIRDGGKRENINIVWAYERRLSRKYADCF
KLATSTQPEAKEQIVNPLSAQEHKCPGGPSRESKVINRMEDKKHEELLFYIAFKNITNKT
FDCDIFLLSGSKAKDGDINILSSVTCHEDVLLTVTFKSEEKAAKTLWHIRNKGHNLKERI
EIVWYHKPLLPGKYLRFLDSASQATEKEVHPNDKVKQHNVASAEHPFPKTNSKCDASMSK
NELQCPSPLKDPGGITGTKRAEDKKIEPFLIYVAFENIPKESFDCTQFLLTQNEVKDNQI
NILSTVLCGADVLLTVTFSSKTKALDTLRSIRTKGNKLKDRKEIKWYYKDSLPRKYCNCL
QSVPQNRNEKVYQNDKKTKQIQRTDVNLPKQPPVHAKNPQHNPYGNKGGETKQQSTKSTA
GSDEKNTKVDAIRPKEEGTCVYVSIQESVKERVLEGFLRARIGCESKATEFKVISTEIEQ
KTSFTMVTIRFKNKLLAREALNLLKMSNLNSETQLGCSLTSPNDTVEFRKEQLANKLNDI
QNRSSKVLHELSSKTDRANDRLNKLVTPAYVSTTEYETIMDQRCALKSDIEEFKNQEKEY
NRCVQDITDRLSNSITSENFEYNLSSETINFGIECCRLESGLPIYGRRFGVLKLIQENQI
VIIRGETGSGKSTQLVQYLYQADFGKTGMITCTQPRKVACVSLAERVATELVTNVGQIVG
YKSGLRRKISEQTKIVYQTHHSLLQECLKDPRLIKYSCIMIDEAHERSIYTDILLSIIKI
CLPVRPDLKVIISSATIDVEIFSEYFHGCPTVEISGRAFPVDVIWRDAEEQYHDFKNFEG
AAVALAKHIHLTEGQGDILAFLPSPLDTEKCKEDLDKKLTGRTNYKCFPFHGQLHPVEQQ
EVFQGLPIGQRKIVFATNAAETSITIPGIKFVIDTGMAKEREFDPIRHINTLRPKIISRS
SANQRKGRAGRTAPGICYRLYTRQSYEEMNPSSVPEIQRVHLGQTLLMLYEMDMDPLTCD
FVEAPCADAMDSALRTLEELRCVVDGKITELGKWLAKIPLEPRLATMIKLGHDKGLLYDA
IVFAVLFGTCGNSIFYRSGSDEAKRRADKLKLRFCHDKGDGLTFMEIYKEWVKQPDRRQF
PWCLENKISAKILRGARETILEIIAVLRKEYQITVDQTFKRGEESVEHLQKFVLYAFFNN
ICYHMGHEKMGYFVPDLDQRVYVHPSSALKALGDSSDWLVYGNFLRTSRDFITTVTPIRE
EWITEIANEKKQHFDVEISKSKKLFRTHTEHFGVSTMAAFIGAKYTNIRRCEDMLSKEFQ
TPIVLEVERDKGDIHLFSTLNSMDAVEQFKNMVKEVKESFQMKSREFQLGSKPTRFGGVR
IVIGVGGEGQMILLPNEYRSIYIVRPHRYTKADDVINKFSEYGEIIDTWQDTRSGDRWGK
LTFESPESALDAVLETQDDEFEAAIPEFKFNDNHDYQFKAKLTWCRRPLTGLAFVDIDPA
DLPKASRLGRLKILDRFVNVNLDRKSGQSLCLRGIPQGAQEEDIRESLISSMRFCSEDEE
DRILRINLLREKVKTTERDLRDIKEKIESVISRIVPDSSFLVDLSAPRKDTDFDFQAFVR
FKQIEHGEKVCRKLTDDIELTISNQIVQITPDLSTSINVTKNVYEKMLPVVKEYIEILRT
KLRMNFHCEIKPLNKNRVSIRIFSEIPKDLSRVRSILATLLKGEVMECWRNDNYRFLFLQ
TGRTFLNDLEKTSNVHIAVDGSRFTISIYGQVKDTSAAQIEINKFLEEVIEGTGREISLN
SADQPKGLMKALIKEYGLNLEILIEEERLNSALLNHSTQVLKLMGTQKNVDKAFSRIAFI
ARALNKTKSQTKSNEELPECSTCFMTVEHISKLYRLEYCGHAYCLDCLHQQIKLAIQNKD
LPILCGGDGCQEPFVWHDFLNTFRKFNIEDECLVNAAVDKFVMKNRESYRHCLSAECPMV
YRITLNGALFVCGECRLKICTTCHVEYHDGLTCEMFKSISKEELSLAKFLGENKDTVKIC
PKCKTLIEKTYGCHHMSCKSCDNHFCWLCLASFGTSKECYTHIAKNHGGINNY
NT seq 6462 nt   +upstreamnt  +downstreamnt
atgtcgaaacccaaagagggtcattcggcaacacctactacaacgatggtcggagattcg
tcccgaggtaggcagagaggaaatggtttttacctgtacattattttcagacaagtttct
gggcgagatctaaattgtgagcagttcttaaaacatgaagttgaaagaaataacttccag
ggcctggaaattattgattcttcaaggtgtggaaaagatgaggtctttaagattaagcta
ccatctatctcaacagttacacgaattatgcccagaataagggatggcggtaaaagagag
aacattaatatagtctgggcctatgagcgtcgtttgtcaagaaaatatgcagattgtttt
aaactcgcaacgtctacacaaccagaagcaaaagaacaaattgttaaccctttgtccgca
caagaacacaagtgtcccggtggtccgtcgagggagtctaaagtgataaacagaatggaa
gacaagaaacatgaagagttgctgttttatatagctttcaaaaatattaccaataagacc
tttgattgtgatatttttttattgtctggaagtaaagctaaggacggtgacatcaatata
ttatcttctgttacatgccatgaagacgtgctcttaacggtaacttttaaatcagaagaa
aaagcagcaaaaacgctttggcacattcgcaataaaggccacaacctgaaagagagaata
gagatagtatggtaccacaaacctttgctgccaggtaaatatcttcgttttcttgattct
gcatcacaagcgacagagaaagaagttcacccaaatgataaggtgaaacaacacaatgtt
gctagcgctgaacatccattcccaaagaccaatagcaagtgtgatgcatccatgtccaaa
aacgagcttcagtgtccaagcccgttgaaagatccaggagggattacaggaacaaaaagg
gcggaagacaaaaaaatcgaaccattcttgatttatgttgcattcgaaaatattcccaaa
gagtcattcgattgtacacagtttttgttaactcaaaatgaagtgaaggataaccagata
aatatattgtccacggttttatgcggcgctgatgttctccttacagttacgtttagttca
aagacgaaagccttggatactctgcgatccataagaaccaaaggtaataaactcaaagat
agaaaagagataaaatggtactacaaggactcgttaccaaggaaatattgtaattgtctt
caatctgtgccgcaaaatagaaacgagaaggtttaccaaaatgataaaaagacaaaacaa
attcaaagaactgacgtcaatctcccaaagcaaccaccagtacatgctaaaaacccccaa
cacaacccatacggaaataaaggtggcgaaacaaaacaacagtcaacgaaaagtacagca
ggatcagatgaaaaaaacaccaaagttgatgcaattcgcccaaaagaggaaggaacttgc
gtctatgtttcaatacaggaatcggtgaaagaaagagtattagaagggtttcttcgagct
agaattggatgcgagtcaaaggctacggaattcaaagtcatctctacagaaatagagcaa
aagacctccttcacaatggtgaccattcggttcaaaaataaacttctagcccgtgaagct
cttaacttactcaagatgagtaatttaaactctgagacccaattggggtgttctttaaca
tcaccgaatgatacggtcgaattcagaaaggagcaactagccaataaactgaacgatatc
caaaatcggtcatcaaaggtgctgcatgagctaagcagtaaaacagatagggctaatgat
cgtctgaacaaattagttacccccgcttatgtatccacaactgaatatgaaaccattatg
gaccaaagatgtgctctgaagtcagatattgaagaatttaagaaccaagaaaaagaatat
aaccgatgcgttcaagatattacagatcgcttgtcaaattcaatcacctctgagaatttt
gaatacaatttatcatcagaaacgatcaattttggtatagaatgttgtcgattagaatcc
ggtctgcccatttatggaagaagattcggtgtcctaaagttgatccaggaaaaccaaatt
gtcattatccgaggtgaaaccggttctggtaaaagtacgcagttagtccaatacctctac
caagctgacttcggtaaaacaggaatgataacatgtacccaacctagaaaggtcgcgtgt
gttagtcttgctgaaagggtagcaacagaacttgttacaaacgttggccaaattgttggt
tacaaatcgggattaagaagaaaaatatctgaacagaccaagattgtatatcagacgcac
cacagtttactccaggagtgccttaaagatccaagattaatcaaatactcctgcatcatg
attgacgaagctcacgaaaggagcatatataccgatattttattaagcatcattaaaata
tgcctcccagttcgcccagatcttaaagtcatcatatcatcggctaccattgatgttgaa
atcttttcggagtactttcacggctgtcctactgtagaaatatctggacgggcgtttcct
gtagacgttatttggcgcgatgcggaagaacaatatcacgattttaaaaactttgagggt
gccgccgttgccttagctaagcatattcatttaactgaaggacaaggagatattttagct
ttccttccatcgccgctagatacagaaaaatgcaaagaagatttggacaaaaaattaacg
ggacgaaccaactacaaatgttttccatttcacggccagctccatcctgtggagcaacag
gaagtatttcagggtctcccaataggacagcgtaaaattgtctttgcaacaaacgcagca
gaaacatctatcactattccaggaataaagtttgtgattgatactggaatggctaaagag
agagagtttgatcctattagacatataaatacattgcgaccgaagattattagtagaagt
tccgctaatcaaaggaaaggtcgagctggaaggacagctcccgggatatgctacaggcta
tatacacggcagagttacgaagaaatgaatccctccagcgttcctgagatacaaagggtg
catcttggacagacacttttgatgctttacgaaatggatatggatccgttgacttgtgat
ttcgtagaagcaccatgtgcggatgctatggattcagcactaaggacactagaagaactc
cgatgtgtggttgatggtaagataacagagctagggaaatggttggcgaaaattcccctg
gaaccacgcttagcaacgatgataaaattgggccatgacaaaggtcttttatatgatgca
atagttttcgccgttttatttggtacatgtggcaattccatattttatcgctcaggttca
gatgaggcaaaacgaagagccgataaactaaaacttagattctgtcatgataaaggtgat
ggcctcacatttatggagatctacaaggaatgggtgaagcaaccagacagacgccagttt
ccatggtgcctcgaaaacaaaatcagcgccaagattttgcgaggagctagggaaacgatt
cttgagatcattgcagttttaagaaaggaatatcaaatcacggttgaccagacatttaaa
aggggggaagaaagtgtggagcatctgcagaaattcgttctatacgccttcttcaacaat
atttgttatcacatgggccatgaaaagatgggatattttgttccagatttagaccaaagg
gtctatgttcatccatcgtcagctcttaaagctctgggtgattctagtgattggttggta
tatggaaattttcttcgaacatcgcgtgactttatcacaaccgtaacccccatcagagaa
gagtggattactgagatagcgaacgagaaaaagcagcattttgacgttgaaatatcaaaa
agcaagaaattattcagaacccacacagaacattttggggtttccaccatggcggctttt
ataggagctaaatatacaaatatcagacgttgtgaagacatgctatcaaaggaatttcaa
acgccaatagttctagaggtggagagggacaaaggggacatccatctcttttctacccta
aattctatggacgcagtggaacaatttaagaatatggtaaaagaagtaaaagagtcgttc
cagatgaaatcccgggagttccagcttggatcaaaaccaactcgatttggcggtgtacga
atagttattggagttggtggagagggacaaatgatacttttaccaaatgaataccggtct
atttatatagtaagacctcatcgttacacaaaagctgacgacgtcatcaataagttctct
gaatacggggagattatagacacttggcaagacacgcgttctggcgatcgttggggaaaa
ctgacttttgaatctccagagagtgcgctggacgctgtcttggaaacacaggatgatgag
tttgaggcagcaatccccgagtttaaatttaatgataaccacgattaccagtttaaagcc
aaattaacgtggtgcagaagacctttaactggtttagcatttgtggacattgatccagct
gatcttcccaaagctagtcgattgggccggttaaagatattggataggtttgtcaatgtc
aacctggacagaaaatcgggtcaaagtttatgtttgagaggaataccccaaggagcacaa
gaagaagatattcgagagagtcttatttcttctatgagattctgcagtgaagatgaagaa
gatcgaatacttagaattaacttactgcgagaaaaagtcaaaaccactgaacgagatttg
cgtgacatcaaggagaagatcgagagtgtgataagccgtatcgtcccagacagctcattc
ctggtggatttatcagctccaaggaaggataccgactttgatttccaagcttttgtgaga
tttaagcaaatagagcacggtgaaaaagtttgcaggaaacttactgacgatatcgaactg
acgatatcgaaccaaattgtccaaatcacaccagacttgtcaacatccatcaatgtaaca
aagaacgtctatgagaagatgcttccagttgtaaaagaatatatcgagattctgcgaaca
aaactcaggatgaatttccattgtgagattaagcccttaaataaaaaccgggtttcaatc
agaatattttctgaaatacctaaagatctttctcgggttagatccatattggccacactg
ttgaaaggagaagtcatggaatgttggaggaatgataactatcgttttctctttcttcaa
acgggtcgaacatttctaaatgacttagaaaagacaagcaacgtgcatattgcggtcgac
ggaagtaggtttacaataagtatttacggacaagtgaaagatacgtctgcggctcagata
gaaattaacaagtttttggaagaagtcattgaagggacgggtagggaaatttctcttaat
tctgctgaccaaccaaagggattgatgaaagctttgatcaaagagtatgggctgaacctg
gagatactgattgaggaggaaaggttgaattcggcacttttaaatcactcaacacaggtc
cttaaacttatgggaactcaaaagaatgttgataaagcatttagcaggattgctttcatt
gcgcgtgcgttgaataagaccaagtctcaaactaaatcaaatgaagagcttccggagtgc
agcacctgttttatgactgtagaacacatctccaaactgtacagattagaatattgtggg
catgcgtattgccttgattgtctacatcagcagatcaaactcgcaatacagaataaagat
ctaccgattctgtgtggaggcgatggatgccaggagccttttgtgtggcatgatttcctt
aacactttcaggaaatttaatatagaggatgaatgcttagttaatgctgctgttgacaag
tttgttatgaaaaatcgggaatcctaccgccattgtctatctgctgaatgcccaatggta
taccgtattacattaaatggtgcgttatttgtgtgtggcgaatgccgattgaaaatctgt
acaacctgtcacgtggagtatcacgatggtctgacgtgtgaaatgttcaaaagtatatcc
aaagaagaacttagtcttgcgaagtttctgggagaaaataaagacacggttaagatatgt
cccaagtgcaaaaccctaattgagaaaacctatggctgccatcatatgagttgtaaatcg
tgtgataatcatttttgctggctttgtttagctagttttggaaccagtaaagaatgttac
acccatatagctaaaaaccacggaggtataaataattactag

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