KEGG   Patella vulgata (common limpet): 126825491
Entry
126825491         CDS       T09576                                 
Name
(RefSeq) nucleoporin SEH1
  KO
K14299  nucleoporin SEH1
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul03013  Nucleocytoplasmic transport
pvul04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    126825491
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    126825491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvul03019]
    126825491
   04131 Membrane trafficking [BR:pvul04131]
    126825491
Messenger RNA biogenesis [BR:pvul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     126825491
Membrane trafficking [BR:pvul04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    126825491
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_EML DUF6896 LIFR_D4 choice_anch_I Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 126825491
NCBI-ProteinID: XP_050411083
LinkDB
Position
6:complement(21099648..21110183)
AA seq 351 aa
MLATKAFPAAHEDLIHDIEYDFHGRRMATCSSDHTVKVWDCDENDQWQCTASWKAHNGSV
WRVTWAHPEFGQVIATCSFDRTAAIWEELIGDQAKDGKTQWVRKTSLVDSRTSVTDVKFG
PRHLGLQLATCSADCIVRIYEAQNVLNLSQWSLQYEIQCGITCSCLSWNPSLSRLHPMMI
AVGSDDPSPATGGKVHIYEYSENSRKWKRVEIIPVSTEPVHDLAFAPNLGRLYHTLAVAS
KDLSIFSIKPLGKESLGSGGISKFEMHRVAEFSDHESQVWRLSWNVLGTVLSSSGDDGRV
RLWKANYAGKWKCIQVINGNGQKISTTKDSKIVTVTSSNNQTQRIYQVHPV
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgttggctacaaaagctttcccagctgcccatgaagatctaattcacgatatcgaatac
gattttcatggaagacgaatggcaacatgttcaagtgaccacactgtaaaggtgtgggat
tgtgatgaaaatgatcaatggcaatgcacagcaagctggaaagctcacaatgggtcagtg
tggagagtaacatgggcacatccggaatttggtcaagttattgcaacttgctcatttgat
agaacggcagctatatgggaagaattaattggtgatcaggctaaagatgggaagacacaa
tgggttagaaagacaagtctggtagatagtagaacttcagttacagatgtaaaatttggg
cctagacatcttggtttacaactggcgacatgttcagctgattgtattgtacgtatttat
gaagcacagaatgtattaaatctaagtcagtggtcgttgcaatatgaaatacagtgtggt
ataacttgtagctgtctgtcatggaatccatcattgtccagactgcatccaatgatgata
gctgtaggtagtgatgacccatccccggctactggaggaaaagtacatatatatgaatat
agtgaaaatagtcggaaatggaagagagtagagattatacctgtgtctacagaaccagta
catgatttagcttttgctccaaatctaggtcgtttgtatcatacactagctgtagcctct
aaagatctcagtattttcagtattaaacctctgggtaaagaatctttaggctcaggtgga
ataagtaaatttgaaatgcacagagttgcagaattctcagatcacgaatcacaggtatgg
agattaagttggaatgttttaggaacagttttatcttcatctggtgatgatggcagagtt
cgattatggaaagctaattatgcgggaaagtggaaatgtatacaggttataaatggtaat
ggacagaaaatatcaacaacaaaggacagtaaaatagttacggttacatctagcaataat
cagacacagagaatataccaagttcatcctgtttga

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