Patella vulgata (common limpet): 126825713
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Entry
126825713 CDS
T09576
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pvul
Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvul03009
]
126825713
Enzymes [BR:
pvul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126825713
Ribosome biogenesis [BR:
pvul03009
]
Eukaryotic type
Pre-60S particles
Helicases
126825713
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GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126825713
NCBI-ProteinID:
XP_050411430
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All DBs
Position
6:22293674..22313048
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AA seq
587 aa
AA seq
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MDESWKNLTVALDKNISKAIQELGFQKMTPVQAATIPRFIQNKDVAVEAITGSGKTLAFV
IPLIQMLLRRESPLKKHEIGGIILTPTRELAIQIDEVLRHFLKHVNQFQSVLFIGGSDVN
ADIENFKTNGCNIIIATPGRMEDMFQRKQDGYNLAVSVKALEVLVLDEADRLLEMGFETS
INTILGYLPKQRRTGLFSATQTDEVENLIRAGLRNPLRITVKEKKSTESQLIPKTPALLE
NFFMIVDADEKLNQLIHFLRKHKKEKIMVFFSSCAAVDYFKKIIELLVKNSNVLHIHGKL
KHKRVKVIEKLRNSDSGILVCTDLMARGIDIPDINWVIQFDAPSSARSFVHRCGRTARIG
NRGNALVMLLPAEETYITFLKINQRTPMLEMEKSLDAANILPKLKKFAKRDRSLYENGMK
AFVSFIQFYGKHECSMIFKTKELDIGQLATGYALLRLPKMPELKGKTIINFEEEDVNPET
IMYKDKSREKLRQEEIKKREAGEITKKGRSFKSKPWSNQIVRKEKRQQNRERRARKKKRK
IELDQGELDELDKDIKLMKKLKTGKVSEEEFAKDFDEMEEKKVIGVK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagctggaaaaatttaactgtcgcattagataaaaatatcagtaaagctatt
caagaattgggctttcaaaaaatgacacctgttcaggcagcaacaataccacgatttatc
cagaataaagatgtggctgttgaggctataactggcagtggcaaaacattggcctttgta
atacctttaatacagatgttattacgtagagaatcaccattaaaaaaacatgagataggt
ggtattatattaacaccgactagagaattagctatacagatagatgaggtattaaggcat
tttttgaaacatgttaaccagttccaatcagttttatttattggtggatcagatgttaat
gcagacattgaaaactttaaaacaaatgggtgtaatattataatagctacacctggtaga
atggaagacatgtttcaaagaaaacaagatggctataatttagcagtttcagtgaaagca
ttggaggtactagtattagatgaggctgatagacttctagaaatgggatttgaaaccagt
attaacacaatattaggctaccttccaaaacagagaagaacaggtttattttcagcaaca
cagactgatgaagtagaaaatttgatacgagctggattaagaaatccattaagaatcact
gttaaagagaagaagagcactgaaagtcaactaattccaaaaacaccagcattattagag
aatttttttatgattgtcgatgcagatgaaaaattaaatcaactaattcattttttacgg
aagcacaaaaaggaaaaaattatggtcttctttagttcatgtgctgctgtagattatttt
aaaaagattattgaacttcttgtgaaaaattctaatgttttacacatccatggaaaatta
aaacataaacgtgttaaagttatagaaaaactacgtaattctgacagtggtatattagta
tgtacagatttaatggctagaggtattgatatacctgatattaattgggttatacagttt
gatgcacctagttcggccagatcttttgttcatcgttgtggaagaacagctagaattggt
aaccgtggaaatgcattagtaatgttattacctgcagaagaaacatatataactttcctg
aaaataaatcagaggacgcctatgctagagatggaaaaatcattagatgctgccaatatt
ttacctaaattaaagaaatttgccaagagagataggtctctttatgaaaatggcatgaaa
gcatttgtgtcttttatacagttttatggtaaacatgaatgcagtatgatatttaaaaca
aaagaattagatataggacaattagctacaggttatgctttattacgtctgcctaaaatg
cctgaattaaaaggtaaaactattataaattttgaagaagaagatgttaatccagaaacc
attatgtacaaagataaatccagagaaaaactaagacaagaagaaataaagaaaagagaa
gctggagaaataacaaagaagggtagaagttttaagtccaagccatggtcgaatcaaatt
gtcagaaaggaaaaaagacaacagaaccgtgaaagaagagcaagaaaaaagaagaggaag
atagagttagatcagggagagttagatgaattagataaagatattaaactaatgaaaaaa
ttaaaaacaggaaaggtatctgaagaagaatttgcaaaagattttgatgaaatggaagaa
aagaaggtcattggtgttaaatga
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