Patella vulgata (common limpet): 126827732
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Entry
126827732 CDS
T09576
Name
(RefSeq) RNA-binding protein FXR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
pvul
Patella vulgata (common limpet)
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126827732
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126827732
Factors involved in mRNA localization
Other mRNA localization factors
126827732
mRNA cycle factors
Stress granule specific factors
126827732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
Tudor_FRX1
KH_1
KH-I_KHDC4-BBP
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
126827732
NCBI-ProteinID:
XP_050413193
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All DBs
Position
1:3380776..3417909
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AA seq
696 aa
AA seq
DB search
MEELVVEVCGSNGAFYKAIVKDVLEDELIICYEHNMKADERIRFLQARLPPTNSSQRLEY
SEGENIEAYNKLGDDIVYAWWPAKLKMLKGEFAVIDYKGGQSASDILPLEKIRPSSVHVP
IHKDSFFRFSLEIPPDLAEACQEESSLAEFKRHCGVGVVSYHPNEDALVVLSTNESVIKK
ASILGDMFLRNLRQKILLKQRTEEAVKKLQSTKIRSGYMEEFSVSDTLMGLAIGTHGANI
QQARKVEGITGIELDETSCTFKVYGENEESVKRARKMLEFAEETFQVPKELVAKVIGKNG
RNIQDIVDKSGVVRVKIEGDNEQEANKADGQLPFVFVGTIESIENAKLLLDFNLDHLREV
EQLRQAKQEIDIQLRSMSGPSTGPYFPPPRERRGSNDPYSDERGGLRRGRGRGGRGGRGR
WNDRTGDDTEPVHVGDWSAEVMAEERRQSGYLTDSVLSGGRGRGYRRGRGRGRYSGYSSL
RRDSDTAWRDSRDYPARNGYMSERFNDDDESRDARSRRRMTDDDDTVLDNASVNSQDGDY
DRRRDRPDRRRRRRKNRTRGNGGGASGTETDTSVSNYRTSRYSNPAPSYRGSRGGLPPSH
STGSIKTDGMASNYSANRNSTNEPTAERQANGQANTKSESSHSRQDQGYTKPDGKPQRQP
RESRHFKQAANPSGSDSDSKARPKVDGKKEQMVNGE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacttgtggttgaagtttgtggatctaacggggcattttacaaggctattgta
aaagatgttttggaagatgaacttattatttgttatgagcataatatgaaggcagatgaa
agaattaggtttcttcaagcaaggttacctcccactaatagttcgcagcgtctggaatat
tcagaaggtgaaaacattgaggcatacaataaattaggggatgatatagtatatgcctgg
tggccagctaaattaaagatgttaaaaggcgaatttgctgtaatagattataaaggtggt
caaagtgcctcagatattctccctttagaaaaaatacgtccatcttctgtacatgtaccc
attcataaagatagtttttttaggttttctttagaaattcctccagacctagcagaggca
tgtcaggaagagtcgtcattggctgaattcaaacgccattgtggtgttggtgttgtatct
tatcatccaaacgaggacgctcttgttgttctgtccacaaatgaatctgtgattaaaaag
gcttccatattaggagatatgtttttacgcaaccttaggcaaaaaatattacttaaacaa
cgtacagaagaagcagtaaaaaaattacagagtacaaagattcgatcaggttatatggaa
gaattttctgtgtcggatacattgatgggtttagcaataggaacacatggtgccaatata
caacaagctcgtaaagtagagggtattaccggtatagaattagatgaaacttcctgtacg
tttaaagtttatggtgagaatgaagaatcggtgaaacgtgctaggaaaatgttagaattt
gctgaagaaacttttcaagttcccaaagaattagttgctaaagttattggtaaaaatggt
cgtaatatacaagatatcgtagacaaatctggtgttgttcgggtcaagattgaaggtgat
aacgaacaggaggctaataaagcagacggtcaactgccatttgtttttgttggaactata
gaaagtattgaaaatgccaaattactgctggattttaatcttgatcatttacgagaagtt
gaacaattacgtcaagccaaacaagagattgatatacagttacgtagtatgtccggtcct
tcaaccggcccttactttccaccacctagagaacgcagaggtagcaacgacccttattca
gatgaaagaggaggattaaggcgtggtcgaggaaggggaggaagaggtggacgagggaga
tggaatgatagaacaggtgatgacacagaacctgtacatgtaggtgattggtcagcggag
gtaatggcagaagaaagacgtcaatccggctacttgactgacagtgtgttaagtggtggt
agggggcgtggctacagaagagggcggggtagaggaagatatagtggttattcttcatta
aggagagattcagatacagcatggcgtgattcacgagattatcctgctagaaatggttat
atgtcagaaagatttaatgatgatgatgaatctcgtgatgctagatcaagacgacgtatg
acagatgatgatgatacagtattagacaacgccagtgtcaacagtcaagatggagattat
gaccgacgtcgtgatagacccgatagaaggcggcggcgtagaaaaaatagaacccgtggt
aatggtggaggggcttcaggaacggaaactgatacaagtgtttctaattatcgtacttct
cgctatagcaacccagccccttcatatcgtggttctagaggaggattaccaccatctcac
tcgactggttccattaaaacagatggaatggccagcaattactcagccaaccgtaactcg
accaatgaaccaactgctgaacgacaggccaacgggcaagccaatactaaatctgaatct
agccattcacggcaagatcagggttacaccaaaccagatggcaaacctcaacgacagcca
agagagagtcgccacttcaagcaagcagctaacccaagtggaagtgactccgattcaaag
gcacggcctaaagttgacggcaagaaagaacagatggttaatggggaatag
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