Patella vulgata (common limpet): 126827843
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Entry
126827843 CDS
T09576
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126827843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126827843
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126827843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
CSTF1_dimer
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
NBCH_WD40
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT122_1st
eIF2A
Beta-prop_HPS5
Ge1_WD40
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
Cytochrom_D1
Beta-prop_SCAP
B-prop_COPA_B_2nd
Beta-prop_NWD2_C
Tricorn_2nd
TEX15
GKRP_SIS_N
VPS8_N
Motif
Other DBs
NCBI-GeneID:
126827843
NCBI-ProteinID:
XP_050413366
LinkDB
All DBs
Position
7:57098942..57111545
Genome browser
AA seq
427 aa
AA seq
DB search
MGDLEIKRREQLYRLIISQLFYDGYKEPAFKLCEIFKPHPTCPPSDRLLQITKVAFQLED
EKNEKKQADTVAPGSGIDLEFETEVQSISAEAALYETCYVTAHKGACRTAAFHHSGQIIA
TGSEDASIKILDVERMLAKSATPAEMIAMETPQQQMENHPVIRTLYDHNDEVSCLDFHPF
HQILASGSKDYSIKFFEYSKPSVKKAYKSIQEVSPVRCISFHPSGEYLLVGVNHPTLRLY
DVNTFQCYVANNPSFQHTAPVTDISWSPNANMFVTCSKDGDIKLWDGVSQKCFNTFKNAH
DSREVTSVLFSRNSKYVLSSGKDSLVKLWELSTNRCLIVYTGAGATGRMEHRTRATFNHT
EDYVLFPDEKTTSLCCWDSRNAERQRLLALGHNGVVRSIVHSPTGPAFISCSEDCRARFW
YRKATTD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacttggaaattaaacgacgcgaacaactttacagactgattatcagtcagtta
ttttatgatggttataaagagccagcttttaaactgtgtgaaatatttaagccacatcca
acatgtcctccatcagaccgtctgctacagataaccaaagtagcttttcaacttgaagat
gagaaaaatgagaagaaacaggcagatacagttgctccaggttctggaatagatttagaa
tttgaaacagaagttcagtctatatcagccgaggcagctctgtatgaaacttgttatgtc
acagctcataaaggtgcttgtaggacggcagcttttcatcattcaggtcagattattgcc
actggttccgaagatgcatcaataaagattctagatgttgaaagaatgttagcaaaaagt
gccactccagctgaaatgatcgccatggaaacacctcagcaacaaatggaaaatcaccca
gtaatacggacattgtatgaccataatgatgaagttagctgcctagattttcacccattc
catcagattttggcctctggtagcaaggattacagtataaaattctttgaatattccaaa
ccatcagttaaaaaagcctacaaaagtatacaggaagtcagtccagttcgttgtatatca
tttcatccatcaggagaatatttattagttggtgtcaatcatcctacattaagattatac
gatgtgaacacatttcaatgttatgtagccaataatccttcatttcaacatacagctcca
gttacagatatcagttggtcaccgaatgccaatatgtttgtaacctgtagtaaagacgga
gatattaaattatgggatggagtcagtcagaagtgttttaatacttttaaaaatgctcac
gattcaagagaagtcacatcagttctgttctcaagaaattctaagtatgttttatctagt
ggtaaagattcattggttaaactatgggaactgtcaaccaatcgttgtttaatcgtttat
actggtgccggagcgactggtagaatggagcatcgaacacgagccactttcaatcacaca
gaagattatgttttatttcctgatgaaaaaacaacaagtttatgttgctgggactcgaga
aatgctgaacgtcagagattgttagctttaggtcataatggagtagtaagaagtattgtt
cattcaccaacaggtccagcgtttatatcttgtagtgaagattgtagagccagattctgg
tacagaaaagctacaactgattga
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