KEGG   Patella vulgata (common limpet): 126828303
Entry
126828303         CDS       T09576                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    126828303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvul03019]
    126828303
   03036 Chromosome and associated proteins [BR:pvul03036]
    126828303
Messenger RNA biogenesis [BR:pvul03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     126828303
Chromosome and associated proteins [BR:pvul03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     126828303
    COMPASS/SET1 complex (yeast)
     126828303
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_SPT8 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_NUP159_NUP214 eIF2A MIOS_WD40
Other DBs
NCBI-GeneID: 126828303
NCBI-ProteinID: XP_050413952
LinkDB
Position
7:24807775..24819403
AA seq 313 aa
MRLTDNVVRNLRVAKIFRENTDRVNSIDFSANGETLISSSDDDSIVIYDCLNGTPKRTLN
SKKYGVDLIRYTHAVNAALHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTLCMSPIDD
SFLSGSLDKTIRLWDLRSQNCQGLMHLSGRPVASFDPEGLIFAAGINSETVKLYDLRSFD
RGPFAAFKLPQDKECDWTGIKFSPDGKLILISTNGPVLRLIDAFQGTPLQNFTGFANNRG
LPLEASFSPDSQFVFCGSTDGKVHSWSTETGTKLAILQADHPGPIQNLLFNPKYMMMASA
CTNMAFWLPLVDE
NT seq 942 nt   +upstreamnt  +downstreamnt
atgagactcactgacaatgttgtgcgaaatcttcgcgttgcaaagatctttcgagaaaat
acggatcgtgtaaatagcattgacttctctgcgaacggtgaaacactaatttctagcagt
gatgacgattctattgtaatttatgactgtttgaatggaacaccaaagagaacattgaat
agtaaaaagtatggagttgatttgattcgttatacccatgcagtaaatgctgcattacat
tcatctaccaaagtagatgacacaatacgatacctttctttacatgacaataaatacatc
cgatattttccaggccataccaaaaaagttgttacattatgtatgtctcctatagatgac
agttttctgtctggttccttagataaaacaatacgattatgggatcttcgatcacaaaac
tgccagggtttaatgcatttgtcgggtagacctgtggcatcgtttgatcctgaaggatta
atttttgcagctggaattaactcggaaacagtaaagctttatgatttacggtcttttgat
agaggaccatttgcagcatttaaattacctcaggataaagaatgtgattggacaggtatt
aagtttagcccagatggtaaacttattttgatatcaactaatggacctgtccttagactt
attgatgcatttcagggaacacctttgcagaatttcactggtttcgcaaataatcgagga
ctacccttagaagcatccttcagtccagattcacagtttgtgttttgtggttctacagat
ggtaaggttcacagttggagtactgaaactggtaccaaactagctattctacaagctgat
catcctggtcctatacaaaatcttctctttaatcctaaatatatgatgatggcatcagct
tgtacaaacatggcattttggttaccattagtggatgaatga

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