Patella vulgata (common limpet): 126829392
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Entry
126829392 CDS
T09576
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126829392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126829392
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126829392
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
SPT6_acidic
Folliculin
DUF1993
Motif
Other DBs
NCBI-GeneID:
126829392
NCBI-ProteinID:
XP_050415168
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Position
8:complement(18509434..18522804)
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AA seq
432 aa
AA seq
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MRETPLSTCERDFILSVIADRKRIDGRQTYDYRKIKIVFGIDRGCCSVELGKTRVLAQVS
CEVTEPQQTRPTDGILFMNVELSPMACPSFESGRLSDEGVELNRLLERCIKESRCLDTES
LCIVAGQKVWTIRIDIHVLNQEGNILDCASIAAITALVHFRRPDVTVSGEDVTIHDLDDR
DPVPLSVHHMPICVSFAFFDQGKFLLVDPENGEEKVMDGKMVIGMNKHREICTLQITGDM
LLLKEQVLRCSNIAVVKVQEISELIQTALENDKTARSEGRKYGFAESIEREQVTTHHTDI
TNVDMEDITQTKDETMVEEDNQEQENSEENKVTILEKGTGIVGEGGRNSWLISDDDEDVK
IEPSIPNKSKKHKQKEKKEAYSFGDDSEEEETVVLDESDLHMIKKVPGSSDSVDLQSLKP
SKSTPGKKKKKR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaacaccgctttctacatgtgaaagagattttattctcagtgttatagccgat
aggaaaagaatagatggaagacagacatatgattacagaaaaataaaaatagtatttgga
attgacagaggatgttgcagcgttgaattgggaaaaacaagggtcttagcacaagtatca
tgtgaagtaacagaacctcaacagaccagacctaccgatggtattttgtttatgaatgta
gagttgtctcccatggcatgtccaagttttgaatctggcagattaagtgatgaaggtgta
gaattaaaccgtttgttagaaagatgtattaaagaatcacgttgtttagatacagaatca
ctgtgtattgtagctggacaaaaggtttggacaataagaatagatatacatgtgctgaat
caagaaggaaatatattggactgtgccagtatagcagccattacagctttagttcatttt
agacgtcctgatgtaacggtatcgggtgaggatgttacaattcatgatttagatgataga
gatccagtacctttaagtgtgcatcatatgcctatttgtgtttcatttgccttttttgac
caaggaaaatttttattagttgatccagaaaatggagaagagaaagtaatggatggtaag
atggtaataggaatgaataaacatagagaaatatgtacattacagataactggtgatatg
ttattacttaaagaacaggtattaagatgttctaatatagcagtggttaaagtacaggaa
atatctgaattaatacaaacagctctagagaatgataaaacagctagatcagaaggtaga
aagtatggttttgctgaatctatagaaagagaacaagtaacaacacatcatactgatata
actaatgtagacatggaagacatcacacaaactaaagatgaaacaatggttgaagaagac
aaccaggaacaagaaaattcggaagaaaataaagtaaccattctagagaaaggaacaggt
attgtaggtgaaggaggccgtaattcctggttgatcagtgatgatgatgaagatgttaag
atagaaccatccatacctaacaaatcaaaaaaacacaaacaaaaggaaaagaaagaagct
tattcatttggtgatgacagtgaggaagaagaaacagttgttttagatgaatcagattta
catatgattaaaaaagtacctggtagttcagatagtgtagatttacaatcattaaaacct
tctaaatctacaccgggtaaaaagaagaagaaaagatag
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