Patella vulgata (common limpet): 126829819
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Entry
126829819 CDS
T09576
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03022
Basal transcription factors
pvul03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126829819
09124 Replication and repair
03420 Nucleotide excision repair
126829819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvul03021
]
126829819
03400 DNA repair and recombination proteins [BR:
pvul03400
]
126829819
Transcription machinery [BR:
pvul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126829819
DNA repair and recombination proteins [BR:
pvul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126829819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
SinI
Motif
Other DBs
NCBI-GeneID:
126829819
NCBI-ProteinID:
XP_050415924
LinkDB
All DBs
Position
1:24251223..24264407
Genome browser
AA seq
458 aa
AA seq
DB search
MAASFTPRKLDCKDLHSYLKTLPGPVLDRLYNHPATCLAVFRELPDLARQYVMRNLFIEQ
PVSQAVIGQWVVNKFTNEHKYACKALSELRVWYEQPIPGGQPGWILNQTFRNNTKVALLG
GGSPWIGGRSTTVDKYAKDIPFLDKYGQDRWECVLHFMVGSSEGSEGVSRDIIEVLNNSG
LMKVDATDSNPLITPAGFQFLLMDTQSQVWYFMLQYLETVEHRGMDLVECLSFLFQLSFS
TLGQDYSTDGMSESQLKFLQHLREFGLVYQRKRKSQRYYPTCLAINLASGLSGVSSDQEK
VGFIIVETNYRIYAYTDSPLKIALLAIFCDMLYRFPTMTVCNLSRTSVREALIRGITAEQ
ILNFLRSHAHPKMLATAPVLPPTITDQVRLWELERDRLKFDDGVLYSQFNSQSDYELLSD
YAKDLGVLVFENASKRVMVVTRSGHDDVKKFWKRQKNS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccttcacgccaagaaagttggactgtaaagatttgcattcgtatttgaag
acgttacccggccctgtgttagaccgactttacaatcacccggcaacatgccttgccgta
ttcagagaattaccagatttagctcgacagtatgtgatgagaaatctatttatagaacaa
ccagtctcccaagctgtgataggacaatgggttgttaataaatttactaacgaacataaa
tatgcttgtaaagcattaagtgaattgcgggtatggtatgaacagccgattcctggaggt
caaccaggatggattctaaatcaaacgtttagaaataatacaaaggtagctctacttgga
ggaggaagtccatggattggaggaagatcaactactgtagataaatatgctaaagatatt
ccttttttagataaatatggtcaagatagatgggagtgtgttttacattttatggttggg
tcatccgagggtagtgaaggtgtcagtagagatataattgaagtgctcaataatagtggt
cttatgaaagtggatgccacggattcaaacccactgataacaccagcaggatttcagttt
ctgttaatggacacacaatctcaagtctggtatttcatgttacagtatctagaaactgtt
gagcatagaggaatggatttagtagaatgtctttcatttctctttcaactaagtttctct
accctgggtcaggattattccacagatggtatgagtgaatcacagttaaagtttctacaa
catttgagggaattcggtctagtttatcagaggaaaaggaaatctcagcgttattatcca
acatgtttagctataaatttagcatccggtttgtccggtgtatcttctgatcaagagaaa
gtaggatttattattgtagaaaccaactacagaatatatgcctatacagattccccgcta
aagattgctttattagccattttctgtgatatgttatatagatttccaaccatgacagtg
tgtaatttaagtcgaacaagtgttagggaagctcttataagaggaatcacagcagaacaa
atactgaattttctgcgatctcatgcccatcctaaaatgttagccacagcaccagtatta
cctccgactataacagatcaagttagattatgggaattagaacgtgataggttaaagttt
gatgatggcgtattatatagtcagtttaactcacagtcagattacgaactactcagtgat
tatgccaaggatttaggagtgttagtgtttgaaaatgcgtctaagagagtaatggttgta
acaagatcaggacatgatgatgttaaaaaattctggaaaagacagaaaaacagctga
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